251 Commits

Author SHA1 Message Date
Dan
39bd041463 Setting defaults for unused configuration settings, so we don't have to set them in the new container configuration. 2021-09-16 13:13:02 -04:00
Dan
187ff3df76 Properly remove files. 2021-08-23 17:08:32 -04:00
Dan
0d18f3454c fix file path arguments in tests 2021-08-20 13:17:57 -04:00
Dan
6317b16408 assure that 2021-08-20 13:11:04 -04:00
Dan
bff5ed05d3 properly log errors when failing to delete local files. 2021-08-19 14:58:55 -04:00
Dan
90cfa16632 Don't depend on files being in ivy/outgoing
Just delete the files in the directory, don't request a delete from Globus.
2021-08-19 12:38:49 -04:00
Dan
27cd4e2bfd Modify the scheduler to check for local files, and send emails. Don't worry about IVY transfers anymore. 2021-08-17 13:20:23 -04:00
Dan
348c5deb1b Modify the scheduler so that we no longer send out text notifications and email notifications should go out immediately if possible. 2021-05-28 11:52:09 -04:00
Dan Funk
1ec53a9f77
Merge pull request #11 from sartography/tweaks
Tweaks
2021-03-29 15:32:18 -04:00
Dan
907853a91c Merge branch 'master' into tweaks 2021-03-29 15:22:58 -04:00
Dan Funk
cd60a68b67
Merge pull request #14 from sartography/feature/download-button
Add an endpoint that will
2021-03-29 15:06:44 -04:00
Dan
52fe3a0bdc Add an endpoint that will 2021-03-29 15:02:01 -04:00
Nile Walker
b79aa89a4f Merge branch 'tweaks' of https://github.com/sartography/uva-covid19-testing-communicator into tweaks 2021-03-03 08:20:28 -05:00
Nile Walker
be9557d344 Added item per page param 2021-03-03 08:20:18 -05:00
Nile Walker
57c058f523 Added item per page param 2021-03-03 06:45:08 -05:00
Dan Funk
3cb338efc7
Merge pull request #10 from sartography/feature/download-button
Feature/download button
2021-02-28 21:11:40 -05:00
Nile Walker
06fbc5ed1c Merge branch 'feature/download-button' of https://github.com/sartography/uva-covid19-testing-communicator into feature/download-button 2021-02-28 19:31:33 -05:00
Nile Walker
28f6fbdf7c Updated Download Endpoint 2021-02-28 19:30:54 -05:00
Nile Walker
960f5be48c Don't recurse indefinitely
in code that only executes in production.
2021-02-28 19:30:32 -05:00
Dan
562de0026f Don't recurse indefinitely in code that only executes in production. 2021-02-26 18:32:35 -05:00
Dan Funk
18f584364e
Merge pull request #8 from sartography/angular2
Angular2
2021-02-26 15:50:28 -05:00
Dan
a68594512b Reworking the user model to include admin status. 2021-02-26 14:59:58 -05:00
Dan
7fd70aceb9 the ivy service issue where Ravi had to re-log us into the system every 10 days seems to be corrected thanks to some very helpful debugging with Ravi and Aaron. 2021-02-26 14:58:40 -05:00
Nile Walker
98ea7cd10f Tests Passing 2021-02-16 00:05:17 -05:00
Nile Walker
8339c691ec Updated Code Tests 2021-02-15 17:53:31 -05:00
Nile Walker
4265b4dd0c Fixing Tests 2021-02-15 16:35:12 -05:00
Dan
2ed94788be set a valid value for the redirect to the front end, allow this to be overriden in production to any value. 2021-02-15 16:05:58 -05:00
Dan
d7fa1a6d67 Merge branch 'master' into angular2
# Conflicts:
#	communicator/__init__.py
#	communicator/services/graph_service.py
2021-02-15 16:05:26 -05:00
Dan
b3a410954b restrict all endpoints. 2021-02-15 15:58:04 -05:00
Dan
1efee85595 fixing signature for list samples. 2021-02-15 12:10:15 -05:00
Dan
fdd21d8d34 Get Samples must remain the same as it is on the master branch, as this is used by external teams. Looks like you have the same identical code in the dashboard that I am removing here. 2021-02-15 12:07:44 -05:00
Dan
14dc370c1d Removing "correct_computing_id", which has run, and is no longer needed. 2021-02-15 11:39:50 -05:00
Dan
78c1431565 Removing "split_location_columns", which has run, and is no longer needed. 2021-02-15 11:37:57 -05:00
Dan
9de6602667 Removing "merge_similar_records", which has run, and is no longer needed. 2021-02-15 11:35:49 -05:00
Dan
f4dd5d8e71 We lost some critical files that enable us to send out email notifications from the system. Adding these back in. 2021-02-15 11:31:19 -05:00
Dan
2fad04f2aa Adding email templates back in. 2021-02-15 11:02:39 -05:00
Dan
bad64b4b34 Merge branch 'master' into angular2 2021-02-15 10:46:43 -05:00
Nile Walker
d0b05017f5 Readded Label Count 2021-02-04 09:16:47 -05:00
Nile Walker
5a64a1d205 Added email vaildation 2021-02-04 09:11:19 -05:00
Nile Walker
5baca8fa3f Changed 'url' to request.host_url 2021-02-03 09:28:01 -05:00
Nile Walker
171b3540f1 Added Redirect 2021-02-03 09:14:52 -05:00
Dan Funk
3027798814
Merge pull request #9 from sartography/dashboard
Dashboard
2021-02-02 15:03:04 -05:00
Dan
4c4ecfe245 Dates, when read in from IVY are coming across as EST, and they must be ingested as such. 2021-02-02 14:59:24 -05:00
Dan
6a43e6f5eb fixing git ignore. 2021-02-02 08:42:50 -05:00
Dan
1aea584e41 Merge branch 'master' into dashboard 2021-02-02 08:40:28 -05:00
Nile Walker
d2bb97802c Ticket #167 Bug Fixes 2021-02-01 09:12:42 -05:00
Nile Walker
b4c8cf7400 Readded Test Inclusion Option 2021-02-01 08:36:48 -05:00
Nile Walker
ebb8a62a08 Added Notifications per file searching 2021-01-29 16:40:10 -05:00
Dan
5ac5cfdc5d Add a field to sample that contains the moment the sample was added to the database, and make it possible to retrieve records on this date. 2021-01-29 14:18:44 -05:00
Nile Walker
05411971ad Added include tests form option 2021-01-29 09:57:58 -05:00