986 Commits

Author	SHA1	Message	Date
Carlos Lopez	2bd906e96d	Update github routines to use branches	2020-08-14 11:04:22 -06:00
Carlos Lopez	304ca77e3e	Fixing exception within NameError handler	2020-08-14 09:01:15 -06:00
Carlos Lopez	369fe4bb35	Automatic events refactoring	2020-08-14 08:36:46 -06:00
Carlos Lopez	aa010272cc	Automatic event creation in study creation	2020-08-14 08:36:10 -06:00
Dan Funk	c57ac6d302	Merge pull request #185 from sartography/feature/107_current_user_info ... calling ldap with no argument will return information about the curre…	2020-08-14 09:18:10 -04:00
Dan Funk	08c24b7441	Merge pull request #184 from sartography/PMI_fix ... Pmi fix	2020-08-14 09:17:58 -04:00
Dan Funk	c12e2b97f3	calling ldap with no argument will return information about the current user.	2020-08-13 21:09:52 -04:00
Dan Funk	1a963cf940	Merge branch 'dev' into PMI_fix	2020-08-13 20:49:45 -04:00
Dan Funk	9a5c1d7cfb	I may have finally wrapped my head around full text search in python. Now properly using an index based on simple rather than english dictionary which has far fewer stop words and stemming processes and plays much better to the type ahead search we are trying to provide. ... Stop words are no longer excluded, so "other" is a valid search and gets a result.	2020-08-13 18:13:41 -04:00
Dan Funk	e8067fe34e	adding additional data to the study details returned during validation/shield testing.	2020-08-12 17:04:59 -04:00
Kelly McDonald	7bfcdd53cd	Merge branch 'dev' into cr-workflow-108	2020-08-12 10:50:19 -04:00
Kelly McDonald	c4a15be90c	Change dmn files to python standard, ... NB: this means mostly false=>False and true=>True We may have to decide if we want to add false and true as extensions in the python namespace.	2020-08-12 10:48:59 -04:00
Aaron Louie	9a31d591ae	Adds user uid and cascades study event in study model. Fixes migration to properly downgrade enums.	2020-08-12 10:13:23 -04:00
Carlos Lopez	79c14ad23c	Unlinking file from workflow instead of trying to delete it	2020-08-10 22:23:20 -06:00
Dan Funk	3cfcd74a6a	Just finding a few more edge cases, all tests should pass now.	2020-08-10 15:16:53 -04:00
Dan Funk	b53d033400	Cleaning up the delete workflow method in study service so we don't try to delete the same thing more than once)	2020-08-10 14:56:33 -04:00
Dan Funk	56b161a234	Fixing the failing tests by passing in workflow.id rather than workflow to the delete workflow endpoint	2020-08-10 13:51:05 -04:00
Carlos Lopez	d3462d2e15	Deleting all dependencies for a workflow	2020-08-10 07:42:56 -06:00
Carlos Lopez	a561a5cddc	Adjusting study events attribute	2020-08-08 18:25:01 -06:00
Kelly McDonald	1ab765b50b	Add test for PMI problem	2020-08-06 10:29:14 -04:00
Carlos Lopez	bf3dae1885	Collecting user generated study changes	2020-08-05 20:29:05 -06:00
Aaron Louie	c25536dcca	Makes Sonar happy.	2020-08-04 16:42:35 -04:00
Aaron Louie	2846bf9451	Fleshes out fake PB response, so workflows that pull from PB actually trigger validation errors	2020-08-04 15:50:29 -04:00
Aaron Louie	b4595b345a	Raises ApiError for 'display_name' extension property exception	2020-08-04 13:59:50 -04:00
Carlos Lopez	04399eec2a	Accepting None for primary_investigator_id	2020-08-04 11:38:46 -06:00
Carlos Lopez	cd9376cf8e	Adding back ability to update studies	2020-08-04 09:13:24 -06:00
Carlos Lopez	50b207307a	Merge branch 'dev' into feature/update_study_status_latest	2020-07-31 14:26:24 -06:00
Carlos Lopez	4fcba113b8	Fixing tests	2020-07-31 11:49:04 -06:00
Carlos Lopez	2c2967e633	Normalizing enum values	2020-07-31 11:19:50 -06:00
Carlos Lopez	5d23223e51	New study status update	2020-07-30 21:03:11 -06:00
Aaron Louie	73699e66bd	Merge branch 'dev' into feature/admin_impersonations	2020-07-30 17:36:20 -04:00
Dan Funk	9704cbcb26	Modifications to the ldap scripts to bring them back in line with what Kelly is doing with the evaluation process.	2020-07-30 13:35:20 -04:00
Aaron Louie	f8944da31f	Merge branch 'dev' into feature/admin_impersonations	2020-07-30 13:01:46 -04:00
Aaron Louie	faba0f55ab	Adds AdminSession model and refactors impersonation methods to use it.	2020-07-30 12:40:53 -04:00
Dan Funk	a6ec0c92c7	Merge remote-tracking branch 'origin/dev' into cr-connect-106-augment-eval-methods	2020-07-30 11:38:47 -04:00
Dan Funk	44deee12de	Merge branch 'dev' into feature/improved_task_event_api	2020-07-30 11:28:52 -04:00
Dan Funk	37d1ba5d5a	Merge pull request #160 from sartography/feature/ldap_lookup_script ... Ldap lookup script	2020-07-30 11:27:38 -04:00
Dan Funk	bf4d882519	Merge branch 'dev' into feature/ldap_lookup_script	2020-07-30 11:19:24 -04:00
Dan Funk	2905fc6173	Merge branch 'feature/ldap_lookup_script' of github.com:sartography/cr-connect-workflow into feature/ldap_lookup_script	2020-07-30 11:17:48 -04:00
Aaron Louie	aa0f24bd33	Fully deletes users from g in test tearDown	2020-07-30 10:40:06 -04:00
Dan Funk	31982f81ae	Merge branch 'dev' into feature/documents_publishing ... # Conflicts: # Pipfile.lock	2020-07-30 10:17:08 -04:00
Aaron Louie	1b0ebecbf4	Uses Flask session to store impersonation state.	2020-07-30 10:17:02 -04:00
Aaron Louie	d301e9e6fa	Adds list_users endpoint. Adds admin impersonate uid parameter to user endpoint. Adds some utility methods to user service. Refactors authentication tests.	2020-07-29 22:47:47 -04:00
Aaron Louie	63537d7765	Adds is_admin boolean flag to user schema	2020-07-29 22:45:56 -04:00
Carlos Lopez	de49397549	Adjustings tests for protocol builder status changes	2020-07-29 10:51:34 -06:00
Carlos Lopez	73a6b7adf1	Fixing tests	2020-07-29 10:25:57 -06:00
Carlos Lopez	6aa21638de	Updating properly study status & fixing tests	2020-07-29 10:25:57 -06:00
Aaron Louie	f897ee3aea	Merge branch 'feature/approvals_dashboard_prototype' into feature/admin_impersonations	2020-07-29 10:32:46 -04:00
Dan Funk	0ea4c13d09	Convert protocol builder status to always be in lower case in order to better match the front end. And also fixing an issue with the multi_instance that is oddly broken suddenly, and I don't know why.	2020-07-28 17:16:48 -04:00
Aaron Louie	79adb673f2	Fixes display_name custom properties	2020-07-28 14:04:18 -04:00