2770125025
Merge pull request #55 from sartography/persist-selected-user-319
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Persist selected user #319
2021-05-14 14:18:18 -04:00
be9484760a
Fixed test.
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The /user_studies route now returns a 200
2021-05-11 17:00:43 -04:00
6c11a04614
PB Mock now retains the selected_user filter when returning to the study listings page.
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Modified the / and /user_studies routes
The / route now redirects to the /user_studies route
The /user_studies route updates the selected_user table.
Added methods `_is_production` and `_get_request_ids` to get uva uid from header on production.
Added `get_current_user`, `get_selected_user`, and `update_selected_user` to help the process.
2021-05-11 16:42:36 -04:00
f9b254c518
We now pass `all` in the user_studies url.
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We use this to turn off selected_user
2021-05-11 16:34:49 -04:00
688023a248
Added table selected_user for ticket 319.
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We now store a user's selected_user so they see a filtered list of studies when returning to the PB Mock homepage
2021-05-11 16:33:44 -04:00
5fa0ae8958
Merge pull request #53 from sartography/irb-pro-api-endpoints-275
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Irb pro api endpoints #275
2021-04-16 17:34:17 -04:00
650cd5c40a
Changed column name in irb_info from `RB_OF_RECORD` to `IRB_OF_RECORD`
2021-04-16 16:39:36 -04:00
584807bb43
Fixed issue with Study Sponsors.
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Was using Sponsor IDs that were only available locally.
Now we load test sponsors, and use them.
2021-04-13 12:47:42 -04:00
d8552b4955
Turned off CSRF token for testing
2021-04-13 12:08:03 -04:00
feff3f4e6b
Added a big test for deleting a study.
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We add a study and then add all the different types of information to the study.
We then delete the study and make sure all the associated information is also deleted.
2021-04-13 12:07:34 -04:00
d7ca809968
Delete the IRB Info when deleting a study
2021-04-09 12:05:27 -04:00
d3818debb4
Added API endpoint for the new irb_info data
2021-04-09 12:04:46 -04:00
4ddf47314d
Merge branch 'dev' into irb-pro-api-endpoints-275
2021-04-09 10:16:29 -04:00
84b3d455c1
Moved the API methods to a separate file.
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Note that I had to move the `connexion_app.add_api()` call so that it happened *after* db.session was defined, so I could import the session into the api.py file
2021-04-09 10:00:24 -04:00
fb99357431
don't depend on dockerhub for nothin, ever.
2021-04-09 09:53:56 -04:00
40f45202df
Ticket 275 - adding new API endpoint for IRB Study Info
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models.py
- Added new IRBInfo model
- Added relationship to Study table
forms.py
- Added form to edit the data
- Added column in Study table for link to edit new info
__init__.py
- Added route for new form page
- Added method to update the db
2021-04-08 17:35:24 -04:00
bd4bd3e49f
Allow deletes even with new model.
2021-04-08 16:11:17 -04:00
128945d0b3
Merge pull request #49 from sartography/irb-api-endpoints-273
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Irb api endpoints #273
2021-04-08 12:44:48 -04:00
2c780c9028
Q_COMPLETE is not a column in the study table anymore. Removed Q_COMPLETE from the API Study component schema
2021-04-06 12:25:21 -04:00
4e2b79741f
Tests were failing because forms were not sending Q_COMPLETE data.
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Added mocked Q_COMPLETE data to `add_study` and `test_add_and_edit_study`.
2021-04-06 12:23:13 -04:00
60da05df4e
Merge pull request #46 from sartography/update-study-details-fields-257
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Update study details fields 257
2021-04-02 18:56:26 -04:00
3a8a0fba25
Merge remote-tracking branch 'origin/dev' into update-study-details-fields-257
2021-04-02 12:43:53 -04:00
81b33ca6f5
Merge pull request #44 from sartography/dependabot/pip/urllib3-1.26.3
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Bump urllib3 from 1.26.2 to 1.26.3
2021-04-02 12:43:06 -04:00
4180fbd433
Merge branch 'dev' into dependabot/pip/urllib3-1.26.3
2021-04-02 12:42:59 -04:00
23d4bf4457
Merge pull request #45 from sartography/dependabot/pip/jinja2-2.11.3
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Bump jinja2 from 2.11.2 to 2.11.3
2021-04-02 12:36:41 -04:00
c9ddfe6be4
Fixing an error in the API.yml file that started showing up with the pip update.
2021-04-02 12:32:23 -04:00
cc1b602e34
Merge pull request #43 from sartography/user-lookup-fix
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Two bug fixes:
2021-04-02 12:20:11 -04:00
15dc53f957
Removed Q_COMPLETE from the StudySchema fields, because it is no longer a column. It is a relationship now.
2021-04-02 11:48:09 -04:00
f23e4e307f
removed commented line
2021-04-01 14:12:23 -04:00
74b6dde9b2
Added component schema for IRBStatus
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Modified Q_COMPLETE property definition for study schema
2021-04-01 14:11:59 -04:00
c9695cc867
Migration for current DB changes
2021-04-01 12:47:27 -04:00
b663a4ec38
Added new API endpoint to check IRB Status for study
2021-04-01 12:46:15 -04:00
8d0382ab5a
The Q_COMPLETE form field on the new/edit study page is changing from boolean to option select.
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Also adding API endpoint to check the IRB status
Added check_study method for API endpoint
Added 'No Error' as default for new Q_COMPLETE select form field
Added code to seed the current status to the form
Added code to process the status information from the form and enter into irb_status table
2021-04-01 12:45:41 -04:00
762c29f951
The Q_COMPLETE form field on the new/edit study page is changing from boolean to option select.
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Import new IRBStatus model
Change Q_COMPLETE form field to SelectField
2021-04-01 12:40:59 -04:00
d9f46de161
The Q_COMPLETE form field on the new/edit study page is changing from boolean to option select.
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Model Changes:
Delete Q_COMPLETE column from study table.
Add Q_COMPLETE to study table as relationship to new IRBStatus table
Add IRBStatus table.
Add IRBStatusSchema for API JSON
2021-04-01 12:39:09 -04:00
f4bd576a72
Sample csv file for testing the file upload feature
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Attempt at testing the file upload feature.
Test fails because SQLite doesn't accept the date as a string. NEED TO FIND A SOLUTION FOR THIS
2021-03-30 11:00:40 -04:00
a2ddfaf03b
Migration script for new db columns
2021-03-30 10:56:49 -04:00
c260e6a465
Added new fields for study_details
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Changed some field types
Removed 2 unused documents from required documents list
Changed the name of required documents from Required to Documents
2021-03-30 10:56:23 -04:00
a1f2b98ecf
Added code to process uploaded study_details csv file
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Modified study_details method to accommodate the csv upload
Added imports for csv, TextIOWrapper
Removed unused imports for date, re
2021-03-30 10:53:56 -04:00
4834c029d9
Added form to upload study_details csv file
2021-03-30 10:48:36 -04:00
5371d204e5
Added db.drop_all() to the tearDownClass class.
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Now we always start tests with a new DB
I tried to add some tests for form validation, but ran into a problem with the csrf_token.
The tests couldn't find it.
This is not a problem using the form for real.
It would be nice to figure this out.
2021-03-25 13:14:17 -04:00
ab776ea47d
Migration for study_details db changes
2021-03-25 13:12:03 -04:00
9d839bb85c
Changed to match real Protocol Builder
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- Removed `Scientific Contact` from Investigator types
- Changed study_details SPONSORS_PROTOCOL_REVISION_DATE data type from integer to date
- Added 8 new fields to study_details
2021-03-25 13:11:27 -04:00
eb4ca6fda4
Sorted the fields in the study_details form to match real Protocol Builder
2021-03-25 13:07:42 -04:00
0ea0b0a233
added form validation for study_details
2021-03-25 13:06:52 -04:00
5c4a8037d4
Bump jinja2 from 2.11.2 to 2.11.3
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Bumps [jinja2](https://github.com/pallets/jinja ) from 2.11.2 to 2.11.3.
- [Release notes](https://github.com/pallets/jinja/releases )
- [Changelog](https://github.com/pallets/jinja/blob/master/CHANGES.rst )
- [Commits](https://github.com/pallets/jinja/compare/2.11.2...2.11.3 )
Signed-off-by: dependabot[bot] <support@github.com>
2021-03-20 02:41:59 +00:00
5fc5a73957
Bump urllib3 from 1.26.2 to 1.26.3
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Bumps [urllib3](https://github.com/urllib3/urllib3 ) from 1.26.2 to 1.26.3.
- [Release notes](https://github.com/urllib3/urllib3/releases )
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst )
- [Commits](https://github.com/urllib3/urllib3/compare/1.26.2...1.26.3 )
Signed-off-by: dependabot[bot] <support@github.com>
2021-03-19 20:04:15 +00:00
b6de1b9146
Two bug fixes:
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- changed onclick to onchange for the select tag
- added BASE_HREF to the redirect url
2021-02-23 17:52:10 -05:00
8a009522c2
Merge pull request #41 from sartography/user-lookup-fix
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fix for user lookup stuff.
2021-02-23 14:41:33 -05:00
467e6200be
fix for user lookup stuff.
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{{ base_href }} needed quotes around it.
Fixed my test for LDAP search so it doesn't have localhost hardcoded :(
2021-02-23 14:01:19 -05:00
Dan Funk
mike cullerton
dependabot[bot]