Dan
eb7760fa55
Adding the migration - very destructive, but required for running the app.
...
minor fixes - there is still some weird problems with study id and user id being null that I need to track down, but the issue is sporadic, and hard to track down.
2022-02-10 11:50:31 -05:00
alicia pritchett
3ee95b3c39
gets master spec
2022-02-10 11:29:38 -05:00
Dan
df3f67601c
performance improvements. and last rements of load_example_data()
2022-02-09 23:29:39 -05:00
Dan
f12c4aba52
Refactor the workflow_spec_service so it doesn't cache anything, it always reads what it needs from the file system.
2022-02-09 21:06:55 -05:00
Dan
cf71f68ad9
all tests passing!!!!!!!!!!!!!
2022-02-09 15:30:07 -05:00
Dan
2cc20d4b9d
really need to avoid any kind of caching in the WorkflowSpecService
2022-02-09 14:43:32 -05:00
Dan
7e7821a5e7
more test passing
2022-02-09 13:01:26 -05:00
Dan
db93f9be4e
fixing the test_spec_files
2022-02-09 12:44:54 -05:00
Dan
f72b25d9be
Merge branch 'feature/spec_files_wthout_db' of github.com:sartography/cr-connect-workflow into feature/spec_files_wthout_db
2022-02-09 11:37:58 -05:00
Dan
8e7c8c87c3
down to just 38 failed tests
2022-02-09 11:37:54 -05:00
alicia pritchett
5bd25b9f60
get all specs change
2022-02-09 11:34:17 -05:00
mike cullerton
1c033ce7f2
Merge branch 'feature/spec_files_wthout_db' of https://github.com/sartography/cr-connect-workflow into feature/spec_files_wthout_db
2022-02-09 10:55:19 -05:00
mike cullerton
9576089e84
Reorder categories
2022-02-09 10:55:02 -05:00
alicia pritchett
8c5f3a8cfb
slight model change thing for categories
2022-02-09 10:27:46 -05:00
Dan
cc915ac25a
refactoring the study service.
2022-02-09 08:50:00 -05:00
mike cullerton
65d6728be7
pass specs to _add_all_workflow_specs_to_study
2022-02-08 15:03:00 -05:00
Dan
25ecc1593a
test_workflow_spec_api passing.
2022-02-08 13:35:27 -05:00
Dan
6c0e38c0a5
Merge branch 'feature/spec_files_wthout_db' of github.com:sartography/cr-connect-workflow into feature/spec_files_wthout_db
2022-02-08 11:31:56 -05:00
Dan
dc040f190e
got one more test to work.
2022-02-08 11:30:13 -05:00
alicia pritchett
38c30adbfc
i think this fixes adding and removing libraries to a spec
2022-02-08 11:27:20 -05:00
mike cullerton
3f856355e2
Merge branch 'git-integration-596' into feature/spec_files_wthout_db
...
# Conflicts:
# config/testing.py
# crc/services/lookup_service.py
2022-02-08 10:38:03 -05:00
alicia pritchett
7b031c26dc
small change to libraries in workflow.py
2022-02-08 10:06:20 -05:00
alicia pritchett
aa9807a543
heres the categories
2022-02-07 15:45:09 -05:00
Dan
1d7ecad51f
Merge branch 'feature/spec_files_wthout_db' of github.com:sartography/cr-connect-workflow into feature/spec_files_wthout_db
2022-02-07 14:58:42 -05:00
Dan
4b8d193fb9
a few more tests passing
2022-02-07 14:58:25 -05:00
alicia pritchett
d4b04f5b80
fixes the import thing for real
2022-02-07 14:10:10 -05:00
Dan
056f901f9a
WIP - its just caos right now.
2022-02-07 12:59:48 -05:00
alicia pritchett
c78140e60c
fixed spec_file.py
2022-02-07 12:17:49 -05:00
alicia pritchett
2a6578b785
fixed workflow.py
2022-02-07 12:10:57 -05:00
alicia pritchett
66906c3786
fix a couple things
2022-02-07 10:57:34 -05:00
alicia pritchett
699d0ab797
updated method calls in workflow.py
...
except for reordering
2022-02-04 15:31:36 -05:00
alicia pritchett
2fb6746f6b
new methods
2022-02-04 14:45:52 -05:00
Dan
6765afbd02
WIP - Move the categories and specifications out of the database.
2022-02-04 13:51:39 -05:00
mike cullerton
64ffbde3d9
Remove unused code
2022-02-03 06:47:41 -05:00
Dan
4ec6e403f5
1. Created a UserFileService, so it's clear what we use when for File Services, UserFiles, SpecFiles, and ReferenceFiles each function differently.
...
2. Reference Files and Spec Files are written to disk, they do not exist in the database at all.
2022-02-02 12:59:56 -05:00
mike cullerton
35e2a53b09
Actually use the model
2022-02-02 12:35:08 -05:00
mike cullerton
55697c6c88
Return the schema
2022-02-02 12:04:28 -05:00
mike cullerton
1cb6465f22
Return the schema
2022-02-02 10:04:02 -05:00
mike cullerton
070c3cfd5d
*** WIP ***
...
New API endpoints, and associated methods.
Services for the new endpoints
Minimal test
2022-02-01 10:49:35 -05:00
mike cullerton
c9b7d95a83
*** WIP ***
...
Beginning of Git integration
- added gitpython to Pipfile
- started additions for api, model, service, and a test
2022-01-28 16:11:36 -05:00
Dan
4c00a5762f
partial commit - new spec_file_service, and new spec_file_api endpoints that use spec and file name, not file id.
...
removed worklow_sync
cleaned up file and workflow models
most of the test are broken.
2022-01-28 06:42:37 -05:00
Dan Funk
97c29bf77c
Merge pull request #449 from sartography/files-to-filesystem-572
...
Files to filesystem 572
2022-01-26 10:11:26 -05:00
Dan
9690ebf883
minor minor stuff.
2022-01-24 14:43:36 -05:00
mike cullerton
7da2fa2171
Fix for failing tests
2022-01-21 15:13:05 -05:00
mike cullerton
65345a8e91
We can now set our own user_id in instance.config so that user dhf8r isn't always logged in.
2022-01-21 14:42:36 -05:00
mike cullerton
76b09a418e
Created separate api files for spec_files and reference_files
2022-01-20 15:22:47 -05:00
mike cullerton
ca54b850cd
UNDO my previous commit regarding get_files needs to have workflow_spec_id
...
We need to call `get_spec_files` instead now
2022-01-20 14:57:32 -05:00
mike cullerton
9ea1399578
get_files needs to have workflow_spec_id
2022-01-20 09:54:22 -05:00
mike cullerton
68820c67cb
Removed (almost) all references to WorkflowSpecDependencyFile
...
(There is still a call in the lookup service, but we need to decide how to fix that)
2022-01-19 16:12:54 -05:00
mike cullerton
16a9a18c5b
Fixed get reference file info, and added test
2022-01-19 15:17:35 -05:00
