c002ef1e76
Added test for new api endpoint to get all standalone workflow_specs.
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Modified test_add_new_workflow_specification to include new standalone argument
2021-04-26 08:56:21 -04:00
54ab7bd2f6
Test and workflow for launching a standalone workflow
2021-04-26 08:53:25 -04:00
e836242f10
Added standalone argument when adding a workflow_spec
2021-04-26 08:52:12 -04:00
a17e1bfaca
When completing a form in a test, check whether workflow is standalone.
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Do not set study_id when workflow is standalone.
*** Note the comment about passing in workflow_spec. We should be passing in a workflow, not a workflow_spec.
2021-04-26 08:50:46 -04:00
6c98e8a2f4
removed duplicate code
2021-04-26 08:47:03 -04:00
077b68c1e2
When creating a workflow for a study, set the user_id to None
2021-04-26 08:46:19 -04:00
f17a9dc0f4
Modified `get_users_assigned_to_task`.
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If we are running a standalone workflow, only return the current user.
2021-04-26 08:45:08 -04:00
b6f5001687
Added methods for the 2 new api endpoints
2021-04-26 08:43:14 -04:00
1f50bdcb81
Migration script for database changes
2021-04-26 08:36:56 -04:00
22432aaf2c
study_id is no longer required for task events
2021-04-26 08:36:09 -04:00
c0655c9d03
Added `standalone` column to workflow_spec
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Added `user_id` column to workflow
2021-04-26 08:33:55 -04:00
fa818bd751
Code for the 2 new api endpoints
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Also modified `update_task` so that it no longer requires a study_id
2021-04-26 08:31:12 -04:00
5936b2e8ef
Created 2 api endpoints; one to get a workflow from a workflow spec, and one to list all standalone workflow specs.
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Also added `standalone` argument to workflow_spec schema properties
2021-04-26 08:27:24 -04:00
069de83bd5
forgot to include a bpmn for the tests.
2021-04-09 09:02:43 -04:00
6427a54d74
Set the correct default value on enumerations - if it is a multi-select enum (checkbox is set) then it should return a default value of an empty array, and not a dictionary.
2021-04-09 08:40:58 -04:00
99394ef953
Fix to spiffworkflow.
2021-04-08 16:11:49 -04:00
41310b6879
Allow both a keyword argument, a single argument when calling delete_file. And call it "delete_file" to be more conssitent with existing scripts.
2021-04-08 13:42:17 -04:00
611c72f431
Merge pull request #284 from sartography/delete-uploaded-file-script-283
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Delete uploaded file script #283
2021-04-08 12:42:30 -04:00
b0896548f2
Merge pull request #285 from sartography/dependabot/pip/deploy/urllib3-1.26.4
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Bump urllib3 from 1.26.3 to 1.26.4 in /deploy
2021-04-08 12:35:30 -04:00
e3302c56ea
Bump urllib3 from 1.26.3 to 1.26.4 in /deploy
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Bumps [urllib3](https://github.com/urllib3/urllib3 ) from 1.26.3 to 1.26.4.
- [Release notes](https://github.com/urllib3/urllib3/releases )
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst )
- [Commits](https://github.com/urllib3/urllib3/compare/1.26.3...1.26.4 )
Signed-off-by: dependabot[bot] <support@github.com>
2021-04-06 18:08:27 +00:00
5155db89f9
Added test for deleting multiple files.
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Fixed existing tests to accommodate changes to test workflow bpmn file
2021-04-05 15:13:32 -04:00
70fbd49aab
Modified my test workflow so it works better for testing multiple file deletions
2021-04-05 15:12:14 -04:00
f8428378e2
You can now delete a document or list of documents.
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Also, refactored the fancy bits into `process_document_deletion`
2021-04-05 15:11:06 -04:00
33cef2bd2a
Added tests for failing conditions
2021-04-05 13:19:29 -04:00
c6b1fd4e52
Fix for failing tests. Q_COMPLETE is no longer a column in the PB Mock study table.
2021-04-05 13:18:56 -04:00
61f37ff894
Changed the order of imports so I could debug a failing test
2021-04-05 13:16:43 -04:00
f0f5cff8d7
Added some checks to do_task to look for valid irb_doc_code and whether or not we found a file
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Added code for do_task_validate
2021-04-05 13:15:09 -04:00
4fd8fd13f8
Remove approvals from the study_info script. It was broken, and isn't really possible in this way anymore
2021-04-05 12:52:23 -04:00
501487b31c
Assure we convert to box for validations as well, and test the bloodly snot out of this.
2021-04-05 12:47:50 -04:00
727aa72e18
Fix a bug from recent performance improvments - be sure that our study info script returns dicts that can be referenced immediately with dot notation, as this is a common pattern in our bpmn script tasks.
2021-04-05 11:31:06 -04:00
9317e49e65
Merge branch 'dev' into delete-uploaded-file-script-283
2021-04-05 10:40:33 -04:00
9f66a938f2
Update pip
2021-04-05 10:19:29 -04:00
d81497f8cb
Test and workflow for new script to delete IRB documents
2021-04-05 08:55:41 -04:00
0eb6291740
Script to delete an IRB document. Takes an `irb_document` argument.
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Deletes all files associated with the workflow with that IRB document code
2021-04-05 08:55:02 -04:00
7ef43fd477
Merge pull request #279 from sartography/263-optimize-dashboard
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263 optimize dashboard
2021-04-02 18:54:56 -04:00
9dca220089
updating package.lock
2021-04-02 17:58:43 -04:00
dcb4e7b736
fixing an error by taking a bit of the magic out of one of Mike's regex hinting tools. I figure the hint is still good, and a little less bittle, and all the information is already there if people need to dig.
2021-04-02 17:58:27 -04:00
3ad3a086ba
Merge branch 'dev' into 263-optimize-dashboard
2021-04-02 17:12:02 -04:00
8edcb4fbc0
Merge remote-tracking branch 'origin/dev' into 263-optimize-dashboard
2021-04-02 17:11:21 -04:00
c7a07af88b
Merge pull request #276 from sartography/dependabot/pip/lxml-4.6.3
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Bump lxml from 4.6.2 to 4.6.3
2021-04-02 17:10:53 -04:00
2100f27976
fixing the api.yml file which was starting to throw errors when updating the libraries.
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Seems that sqlalchemy now has a hard time incrementing sequences, so putting in a fix for this.
Upgrading many of our libraries, to avoid any disconnects as we try to handle security patches from these automated bumps.
2021-04-02 17:10:05 -04:00
51b8b4f52c
Merge remote-tracking branch 'origin/dev' into dependabot/pip/lxml-4.6.3
2021-04-02 15:11:09 -04:00
33a87f6c35
Merge branch 'dev' into dependabot/pip/lxml-4.6.3
2021-04-02 14:55:59 -04:00
6083cacc4a
Merge pull request #268 from sartography/dependabot/pip/deploy/urllib3-1.26.3
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Bump urllib3 from 1.26.2 to 1.26.3 in /deploy
2021-04-02 14:55:34 -04:00
ae1e847d73
Merge pull request #278 from sartography/dependabot/pip/deploy/pygments-2.7.4
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Bump pygments from 2.7.2 to 2.7.4 in /deploy
2021-04-02 14:35:36 -04:00
cfa8003173
Merge branch 'dev' into dependabot/pip/deploy/urllib3-1.26.3
2021-04-02 14:32:03 -04:00
d7894f43b6
These changes relate to changes in PB Mock ticket 273, where we removed Q_COMPLETE as a column in the PB Mock Study table. It is now a relationship.
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Here, we removed Q_COMPLETE from ProtocolBuilderStudy and ProtocolBuilderStudySchema definitions to accommodate the PB Mock changes.
***This push will need to be coordinated with ticket 273***
2021-04-02 12:01:00 -04:00
116bf5e7aa
Merge branch 'dev' into 263-optimize-dashboard
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# Conflicts:
# crc/services/study_service.py
2021-03-31 10:20:33 -04:00
9084866015
Update error message - it may be that we should spend a bit and see if we can make the Box error
2021-03-31 10:17:08 -04:00
60f5be1aef
Check in - pending change from @cullerton
2021-03-30 12:10:49 -04:00
mike cullerton
Dan
dependabot[bot]
Kelly McDonald