sartography/cr-connect-workflow
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1122 Commits

Author SHA1 Message Date
Dan
848c2e622f Always use a schema to define what is being returned, it enforces consistency of the API and internally we can depend on well defined objects. 2021-08-10 16:16:08 -04:00
Dan
913c12c02d Merge branch 'dev' into bug/pi_name_missing_246 2021-08-10 15:06:52 -04:00
mike cullerton
dce95189cb Merge branch 'dev' into dmn-from-spreadsheet-395 2021-08-10 09:39:42 -04:00
Kelly McDonald
960d302c03 Finish #367 - Make sure that we only use a primary_id if it is in the workflow that we are currently working on - otherwise it is a library and might have its own primary id. 2021-08-10 09:15:38 -04:00
mike cullerton
c153c5e344 Another test spreadsheet 2021-08-09 13:27:58 -04:00
mike cullerton
deebc49a82 Removed test files - don't need under version control 2021-08-03 12:20:25 -04:00
mike cullerton
0e20480f52 Removed test files - don't need under version control 2021-08-03 12:17:54 -04:00
mike cullerton
64576ee8fd It now adds the dmn file to the DB. 
Added annotations.

Still need to move it out of a script.
Maybe a new API endpoint and a new method in file_service
 2021-08-03 11:55:50 -04:00
Kelly McDonald
6e1fedb704 Add tests for libraries, remove an API endpoint that didn't make sense after recent changes and remove some commented out sections that were not needed after some decisions about the api endpoints were made 2021-08-03 10:02:22 -04:00
mike cullerton
deb16740f6 First attempt at creating dmn from spreadsheet. 
xml template and example spreadsheet
 2021-08-02 10:04:25 -04:00
mike cullerton
e1aee0f635 First attempt at creating dmn table from spreadsheet. 
Starting as a script
 2021-08-02 10:03:10 -04:00
Kelly McDonald
41ad7935f8 Merge branch 'dev' into 367-Call-Activity 
# Conflicts:
#	Pipfile.lock
 2021-07-29 09:28:21 -04:00
Kelly McDonald
217e61eed3 next_task returns the next available task, except when the task is completed when it returns the EndEvent - 
The problem was that it was returning the first EndEvent it found, not the last one. This caused a problem when we had a CallActivity which has its own EndEvent.

Fixes #399
 2021-07-27 09:19:08 -04:00
Kelly McDonald
b857fddbad commit in intermediate changes to work on a bug 2021-07-26 13:00:11 -04:00
Dan Funk
25e00823a7
Merge pull request #342 from sartography/enum-file-data-375 
Enum file data #375
 2021-07-23 13:47:57 -04:00
mike cullerton
4c8a86f9bf Fixed bug where processing file data only worked for enums. 2021-07-23 11:24:17 -04:00
Dan
7f5c7417d8 Print out some additional debugging information in the email script so we can tell what is happening and where. 2021-07-22 16:02:08 -04:00
NWalker4483
38b8c7fcdf Fixed email_cc test 2021-07-22 15:08:28 -04:00
NWalker4483
b94d49076d Fixed Associate API Endpoint description 2021-07-22 14:36:00 -04:00
NWalker4483
90425ebbb3 Merge branch 'bug/missing_pi_name_246' of https://github.com/sartography/cr-connect-workflow into bug/missing_pi_name_246 2021-07-22 14:09:34 -04:00
NWalker4483
a73d1794eb Fixed Associate API Endpoint description 2021-07-22 14:09:24 -04:00
Dan Funk
61504664d4
Merge pull request #346 from sartography/bug/346_timer_fails_to_send_email 
fixes #346, allow emails to fire in scheduled events
 2021-07-22 13:40:12 -04:00
Dan
2009a794ea We were depending on an active http request existing in order to fire emails, using that request to determine the front end url. We have the frontend url in our config file, and we don't have a request object when running scheduled tasks, so I just use our configuration setting instead. 2021-07-22 13:25:06 -04:00
NWalker4483
1cfb7f96fa Missing uid declaration in study service corrected 2021-07-22 11:28:11 -04:00
mike cullerton
8df1145471 Modify the LDAP service to only use lowercase UIDs. 
UVA always returns the UID as lowercase.
This caused a postgres unique value problem for us.
 2021-07-22 10:46:09 -04:00
mike cullerton
428802b9d0 Modify LDAP script so that it doesn't raise an error when we don't get a record back from LDAP. 
We now return an empty dictionary
 2021-07-22 10:44:41 -04:00
Kelly McDonald
48516e4009 Parent side working 2021-07-22 10:23:05 -04:00
Kelly McDonald
2455495457 got library side working - still need to have parent working 2021-07-22 10:20:34 -04:00
NWalker4483
3906580604 Merges getStudyAssociates() endpoint 2021-07-20 14:25:01 -04:00
NWalker4483
a263447806 Merges getStudyAssociates() endpoint 2021-07-20 13:57:32 -04:00
NWalker4483
4632c6374f Merge branch 'dev' into bug/missing_pi_name_246 
# Conflicts:
#	crc/api.yml
#	crc/services/study_service.py
 2021-07-20 11:44:11 -04:00
mike cullerton
354e20c34b Use the data_store_service to set the data_store, rather than access DB directly. 
Pass the label explicitly (as the value)
 2021-07-15 13:09:40 -04:00
Dan
dd67a5e650 Never set the date to datetime.utcnow() on DateTime fields. We want this to fall back on the func.now() method and allow the database to set the time on insert. 2021-07-12 15:58:32 -04:00
Mike Cullerton
522ca9d164
Merge pull request #340 from sartography/bug/better_errors_on_scheduled_tasks 
Assure we log reasonably clear errors when executing scheduled tasks …
 2021-07-12 10:13:02 -04:00
Mike Cullerton
d1bf370a39
Merge pull request #339 from sartography/restrict-loaded-studies-374 
Restrict loaded studies #374
 2021-07-12 10:11:34 -04:00
Mike Cullerton
7070761089
Merge pull request #338 from sartography/document-spreadsheet-name-380 
Document spreadsheet name #380
 2021-07-12 10:11:16 -04:00
Dan
f982745d32 fixing a failing test, don't assume the study and workflow ids will always be 1. 2021-07-12 10:00:39 -04:00
Dan
1916c4ff54 Assure we log reasonably clear errors when executing scheduled tasks in the background, so that sentry can pick them up and they can be addressed effectively. 2021-07-12 09:43:12 -04:00
mike cullerton
690c059335 get_studies_for_user is no longer a static method 2021-07-09 10:37:57 -04:00
mike cullerton
dad2de9f0c get_user_studies now checks study_details['REVIEW_TYPE'] before displaying a study. 
This corresponds to REVIEWTYPENAME being `Full Committee`, `Expedited`, `Non-UVA IRB Full Board`, or `Non-UVA IRB Expedited`
 2021-07-09 10:37:25 -04:00
Kelly McDonald
79c69037dd Filter out Library categories from the list returned 2021-07-08 08:57:40 -04:00
mike cullerton
d6f9b013f7 Change irb_documents to documents 2021-07-07 12:54:03 -04:00
mike cullerton
23180908c8 Undo change. Wrong branch 2021-07-07 12:43:51 -04:00
mike cullerton
c39e08972d Change irb_documents to documents 2021-07-07 12:42:01 -04:00
Dan Funk
3c52453c26
Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:35:24 -04:00
Dan Funk
2ed436327f
Merge pull request #333 from sartography/check-study-script-273 
Check study script #273
 2021-07-07 11:28:32 -04:00
Dan Funk
db9b228735
Merge pull request #334 from sartography/WaitingEventsHotPatch 
Make a change so that anything that has a waiting event is labeled in…
 2021-07-07 11:27:10 -04:00
Dan
2a45f2fcda Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:24:00 -04:00
mike cullerton
b0cf74fa3d Merge branch 'dev' into add-by-user-61 
# Conflicts:
#	tests/files/test_files_api.py
 2021-07-07 10:46:50 -04:00
mike cullerton
c11b5cfb29 Add user_uid to api output 2021-07-07 08:18:02 -04:00