Dan Funk
b28ddef842
Merge pull request #430 from sartography/study-status-scripts-556
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Study status scripts #556
2021-12-08 10:36:53 -05:00
Dan Funk
c3513cc6e8
Merge pull request #432 from sartography/bug/task_data_overwrite_by_previous_submission
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assure we don't overwrite task data with a previous form submission i…
2021-12-08 10:36:27 -05:00
Dan
ffafc1674a
assure we don't overwrite task data with a previous form submission if that data already exists.
2021-12-07 17:04:20 -05:00
Dan Funk
14438f0073
Merge pull request #431 from sartography/user-studies-endpoint-561
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User studies endpoint #561
2021-12-07 10:15:42 -05:00
mike cullerton
4ea3682dd6
Updated for new ProtocolBuilderCreatorStudy model and schema
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Removed unused imports
2021-12-06 14:43:07 -05:00
mike cullerton
9785a2fe5a
Updated for new ProtocolBuilderCreatorStudy model and schema
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Added with `session.no_autoflush` to stop rollback during test
2021-12-06 14:42:34 -05:00
mike cullerton
d08b2a8562
Updated for new ProtocolBuilderCreatorStudy model and schema
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Removed unused imports
2021-12-06 14:40:56 -05:00
mike cullerton
d0ddc7a00f
Updated to match new UVA API endpoint
2021-12-06 14:39:49 -05:00
mike cullerton
8813098190
Updated to use new ProtocolBuilderCreatorStudy model and schema
2021-12-06 14:37:42 -05:00
mike cullerton
db1f3ba6ab
Model and schema for new StudyCreator api endpoint
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Update StudyModel to use new model
2021-12-06 14:36:34 -05:00
mike cullerton
791328d520
Don't need to ask the question twice
2021-12-03 12:18:17 -05:00
mike cullerton
7ca7de177e
Removed print statements
2021-12-03 11:55:35 -05:00
mike cullerton
6be9529b22
Fixed the class names
2021-12-03 11:53:21 -05:00
mike cullerton
fa61aa0354
Tests for set_study_status
2021-12-03 11:45:39 -05:00
mike cullerton
34b4913542
Restructured `do_task`
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Fixed up `do_task_validate_only`
2021-12-03 11:45:02 -05:00
mike cullerton
52bfa848ac
*** WIP ***
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Script to set study status
2021-12-02 17:11:28 -05:00
mike cullerton
1ed76bf534
test for get_study_status
2021-12-02 15:31:14 -05:00
mike cullerton
8c66a3d2ef
Script to get the status of the current script
2021-12-02 15:30:47 -05:00
Dan
5cf011f1d9
Quick fix for ldap.
2021-12-02 12:19:36 -05:00
Mike Cullerton
acf4b5596e
Merge pull request #428 from sartography/bug/555_timer_event
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We were not correctly handing the possibility of there only being a w…
2021-11-30 13:44:37 -05:00
Dan
cf3f8ce444
Missing the bpmns for a test.
2021-11-30 13:29:31 -05:00
Dan
676321c2e2
Fixing a test.
2021-11-30 12:55:52 -05:00
Dan
ad93b5fae6
We were not correctly handing the possibility of there only being a waiting task (and no ready tasks).
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We also had a problem with the validator throwing a 500 when it was trying tell us it would never finish validation.
2021-11-30 12:44:35 -05:00
Mike Cullerton
ec9d8f8a5c
Merge pull request #425 from sartography/bug/slow_ldap
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Remove wild-card from uid search, it performs very badly. Add a bit …
2021-11-30 11:09:42 -05:00
Mike Cullerton
8cc581611e
Merge pull request #426 from sartography/feature/performance_improvement
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Performance upgrades - study dashboard in less than 2 seconds now
2021-11-30 11:09:28 -05:00
Dan Funk
8c30df011b
Merge pull request #427 from sartography/workflow-status-script-548
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Workflow status script #548
2021-11-30 10:51:57 -05:00
Dan Funk
c8c8c8b244
Merge pull request #424 from sartography/xls-xlsx-issue-540
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Xls xlsx issue #540
2021-11-30 10:50:33 -05:00
mike cullerton
0f1ccd7db5
New script to check workflow status.
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Includes test and test workflow
2021-11-30 08:54:15 -05:00
Dan
455c1035f1
Performance upgrade to script.py - reduce the number of times we generate the augmented list of script functions for running python evals.
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Performance upgrade to study_service.py - Don't query on the whole WorkflowModel, just get the status that we need. Saves lots of complex joins.
Performance upgrade to SpiffWorkflow - don't convert to box unless we have to do so.
2021-11-29 17:48:05 -05:00
Dan
b9c936da38
Fix the test.
2021-11-29 11:25:45 -05:00
Dan
e5b1daa3d9
Remove wild-card from uid search, it performs very badly. Add a bit of logging so we can easily see performance in the future.
2021-11-29 11:03:14 -05:00
Dan
8ec58fd6d7
Assure better error messages when parsing word documents with jinja syntax.
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I also have a pull request into the folks that run the python docx library to improve their error messages that we depend on here.
2021-11-23 14:38:48 -05:00
Dan
4a1285b8e0
When validating a workflow, don't run the master workflow multiple times, its a huge waste of time.
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Provide decent data when calling get_study_associate(s) scripts.
2021-11-22 17:17:19 -05:00
Dan
5bb7dbfb19
Improve the error messages returned from jinja template processing. Try to find the actual line with an error in it.
2021-11-22 14:46:33 -05:00
Dan
12b78c1f99
Value Errors should also alert us that we can't serialize the json.
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Enum Label was depending on the options attribute not existing in some situtations, which is a bad assumption. Rather, check for specific properties, and call back to using options as the default.
2021-11-22 12:37:10 -05:00
Dan
4d1f4429ff
Fixing a bug in enum_label that was not working when lookup up an select list from a spreadsheet.
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Assure we raise more thoughtful error messages when running getting exceptions in engine tasks.
Field Options should always be available now due to a fix in Spiffworkflow.
2021-11-22 12:26:30 -05:00
Dan
7041c2285b
bumping spiffworkflow for some small fixes.
2021-11-18 14:23:55 -05:00
Dan
84fd3da99f
Force celery to be <5 to deal with the increasing pain of Connexion. We should definitely kill Connexion and go a diffrent rounte.
2021-11-18 13:32:26 -05:00
Dan
b12e178288
Fixing a failing test.
2021-11-17 14:12:15 -05:00
Dan
7b02f46403
During validation, options were not being handled correctly for certain types of lookups.
2021-11-17 13:38:41 -05:00
Dan
5e97953c19
Merge branch 'dev' into xls-xlsx-issue-540
2021-11-16 15:59:06 -05:00
Dan
8e2e3519f6
fixes to our tests related to updates in SpiffWorkflow
2021-11-16 15:57:37 -05:00
Dan
3569c82e80
fixing additional tests
2021-11-16 15:46:02 -05:00
mike cullerton
99d0035b41
Merge branch 'dev' into xls-xlsx-issue-540
2021-11-16 12:33:32 -05:00
mike cullerton
cb77db26a3
Minor edit, for clarity
2021-11-16 12:05:20 -05:00
mike cullerton
df0800f071
New test and xls file for failing test
2021-11-16 11:57:24 -05:00
mike cullerton
9f18484ebb
Grab exception when reading older xls spreadsheet into pandas
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Renamed `xls` variable to `xlsx`, so it makes more sense
Added a hint to error_service for validation
2021-11-16 11:54:31 -05:00
Dan
c25d173606
Set the default level of logging to be INFO, not DEBUG, we don't want everyone elses debug information.
2021-11-15 13:39:42 -05:00
Dan
ca5e984915
Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev
2021-11-11 13:47:43 -05:00
Dan
8cabdd1f96
Bumping to new release of SpiffWorkflow.
2021-11-11 13:47:35 -05:00