99c1d1b129
Test for changes to hard_reset and soft_reset
2021-01-13 16:12:14 -05:00
442a4524c4
Test for new functionality and code coverage
2021-01-12 10:18:35 -05:00
abc17add89
file order was not deterministic - alter test to make sure we updated the 'right' file rather than relying on ordering
2021-01-12 08:54:15 -05:00
26655b26d3
merging in dev, and fixing a failing test from dev.
2021-01-08 14:42:13 -05:00
9118517995
Merge pull request #220 from sartography/prevent-duplicate-template-upload-111
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Users cannot upload a workflow_spec_file that already exists. We rais…
2021-01-08 13:55:19 -05:00
be288ae048
Merge pull request #219 from sartography/fix-api-call-missing-fieldname-143
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Fixed ApiError call. Now includes task_id and task_name.
2021-01-08 13:46:26 -05:00
d274813ae5
We now check form field IDs so they play well with Python and Javascript.
2021-01-07 11:10:31 -05:00
c9a4a9685f
Users cannot upload a workflow_spec_file that already exists. We raise an error that is displayed on the fron end.
2021-01-04 15:47:45 -05:00
0ae4448fbe
Fixed ApiError call. Now includes task_id and task_name.
2021-01-04 13:48:34 -05:00
0c47d09972
Ticket 143. Test whether file is uploaded.
2021-01-04 10:53:21 -05:00
80d2009573
Modified the test to cover hold, abandon, and open_enrollment. These are tickets 21 and 94
2020-12-31 10:40:27 -05:00
ede5df4df5
Studies can now be put on hold in the dashboard. We were overriding the status in StudyModel.update_from_protocol_builder.
2020-12-30 17:49:59 -05:00
96739d99c4
Fixing a failing test because new logic was catching a different error.
2020-12-29 11:14:40 -05:00
c288a8a2bc
Merge branch 'dev' into check-field-type#143
2020-12-29 11:11:43 -05:00
052ee40238
Cleanup from test email script changes. Removed commented piece of code containing my private email address.
2020-12-28 18:05:47 -05:00
06318c87b1
Test and workflow for changes to workflow_service. The workflow does not have a field type. We look for evidence of raised exception in data of response.
2020-12-28 18:03:59 -05:00
6cfce839c1
Validation now assures that we won't encounter errors when generating navigation lists.
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Fixing workflow sync paths that were incorrect.
Repairing a suddenly failing test in files, that just don't make no sense.
Bumping spiffworkflow that contains a fix for issue #155
2020-12-28 17:33:38 -05:00
1f9bf72c59
Merge branch 'dev' into bug/navigation
2020-12-14 11:46:44 -05:00
4268d0f482
Merge pull request #208 from sartography/152-workflow-spec-pull
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152 workflow spec pull
2020-12-14 11:35:06 -05:00
bcb78de225
Merge branch 'dev' into bug/navigation
2020-12-14 11:33:51 -05:00
e54404e424
Merge pull request #205 from sartography/test-email-script
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Test email script
2020-12-14 11:28:14 -05:00
6bf24cc438
fixing some failing tests related to changes in the underlying spiffworkflow library.
2020-12-14 11:27:38 -05:00
b62a9c7074
Merge remote-tracking branch 'origin/dev' into bug/navigation
2020-12-14 10:40:21 -05:00
082dee46e0
fixing some failing tests.
2020-12-14 10:37:35 -05:00
d8ac20b1c3
I added a second file to 'random_fact' test workflow, so another test was expecting 2 files in it after adding a new file, but there were 3 -
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Nothing to see here - move along
2020-12-14 10:37:16 -05:00
38a6fa782d
Fixing the email script test.
2020-12-14 10:29:53 -05:00
ee3ee9fd4a
Added tests to cover most of the use cases and code, and a bunch of stuff to make the mocks happy
2020-12-14 10:27:40 -05:00
02ea414b94
Additional fixes to Navigation to allow a nested navigation structure.
2020-12-14 10:07:19 -05:00
7defc2b02f
Tests for uid in logs. Currently we test for uid in a response. This covers ApiError.
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Currently, we don't have a test for Sentry. Unsure how to do this.
Also added a script, service and test workflow to help. (Also to learn about adding a script and service.)
2020-12-11 17:47:53 -05:00
3a1160efac
refactored calls into a service
2020-12-11 11:41:32 -05:00
9eea26e019
add workflow_sync test
2020-12-11 08:34:59 -05:00
32c5060a31
No longer use eval on the email address. It is already parsed.
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Tests for single and multiple emails, and email error checking.
Still need to figure out how to implement multiple emails.
2020-12-09 12:11:46 -05:00
730d0ca18f
Email script now uses an email address instead of a UVA LDAP user_id.
2020-12-07 16:23:41 -05:00
8ba1e90f9a
Test for ticket 153 to include user in error messages
2020-12-07 08:39:00 -05:00
750a202e99
Test and BPMN files for testing email script
2020-12-06 10:22:32 -05:00
93b12a8e82
updates using new navigation from spiff workflow's navigation branch, all tests passing.
2020-12-04 17:56:12 -05:00
e15130e09c
Merge pull request #203 from sartography/151-data-store-exclusive-branch-expression
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Added the ability to use the custom functions within a decision/flow …
2020-12-01 14:44:27 -05:00
94662c560e
Added the ability to use the custom functions within a decision/flow coming off of an exclusive join
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Altered previous test to test this feature
2020-12-01 09:13:12 -05:00
73e01b347b
Ticket #105 . Verify End Event Documentation. Added explicit call to _process_documentation at end of crc.services.workflow_service.test_spec for the end event
2020-11-24 16:51:18 -05:00
a6f9e27ca3
test and bpmn files for ticket #105 (verify end event)
2020-11-24 10:47:20 -05:00
b8a91a513b
Merge pull request #196 from sartography/128-data-store
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128 data store
2020-11-18 18:55:33 -05:00
70c621fe87
fixing the bpmn to use cancel, and pulling in pudates to the spiffworkflow branch.
2020-11-18 16:39:09 -05:00
b83ab1bcd1
Move data store base into its own file.
2020-11-18 15:34:50 -05:00
d198f124d7
Committing a merge from dev
2020-11-18 15:33:44 -05:00
c62b73a539
drop some of the test-only api endpints and rework the tests so they aren't needed
2020-11-18 15:04:36 -05:00
72ade3c367
Add crosstalk test
2020-11-17 10:29:49 -05:00
e9979efb0d
Add some tests
2020-11-17 09:33:29 -05:00
a2dc3c4812
Use Cancel Event
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New title 'New Title'
2020-11-16 09:59:22 -05:00
9a4d167dcd
Add in api changes
2020-11-11 09:44:58 -05:00
3ba11f5e6b
add user_data_get/set and alter test so that it ensures that we don't grab study_data stuff from the user_data calls
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change the test to mock up the user.
2020-11-10 10:32:37 -05:00
92595e3c42
base_test didn't 'know' about the DataStoreModel so it wasn't creating the data_store table, causing a lot of problems after the initial setup/teardown
2020-11-10 09:33:54 -05:00
69fe55aa56
Add mostly-working elements of the data-store, compare with dev to see why db is not working after running tests
2020-11-10 08:24:17 -05:00
245124779e
Add mostly-working elements of the data-store, compare with dev to see why db is not working after running tests
2020-11-10 08:21:46 -05:00
e598994d34
Change the study_sponsors script so that we can actually call it :
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var = study_info('sponsors')
to keep it more in line with other scripts that we have
2020-11-05 10:31:47 -05:00
a78af4eab8
Run cancel task during interrupt. Currently this uses Signal event. We may change this to the Cancel event.
2020-11-04 14:37:53 -05:00
8b23cdc05c
commit changes before switching branches
2020-10-09 08:46:14 -04:00
b2aede2b8d
Glob on windows seems to return directories where in linux it does not, so now assuring we don't try to add files from the sub-directory.
2020-10-05 17:35:35 -04:00
014a4d9757
Fixing a failing test and updating the personnel.
2020-09-02 08:24:48 -04:00
b544334f45
1. Updating Personnel BPMN diagram to debug some issues.
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2. Disabling the token timeout for now, to see if this corrects the issues Alex is having with lost work.
3. Raising more thoughtful error messages for unknown lookup options.
4. Providing better validation of default values and injecting the correct value for defaults related to enum lists of all types.
5. Bumping Spiffworkflow library which contains some better error messages and checks.
2020-09-01 15:58:50 -04:00
1052dff549
Merge remote-tracking branch 'origin/dev' into feature/python_eval
2020-08-27 14:33:16 -04:00
b39fd73bc0
fixing a failing test due to changes in the master bpmn for CRC
2020-08-27 14:06:03 -04:00
5dacc46600
Adding some additional bpmns from Staging server to include in tests.
2020-08-27 14:00:45 -04:00
53d09303d8
Validating that field properties are valid - they must exist as constants on the Task model.
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Making all the lookup field names consistent.
Fixing the lookup service which was failing at times trying to find the correct field to use for building the lookup table.
Updating validation to check for additional fields and properties.
When connexion level errors occur, wrapping it in an API Error to be consistent.
2020-08-27 14:00:14 -04:00
23fd1fbfa0
Removing a rogue file.
2020-08-25 11:15:43 -04:00
d31fd47837
Merge branch 'dev' into feature/python_eval
2020-08-25 11:08:42 -04:00
8dcb598a24
Adds unit test for ProtocolBuilderService.get_sponsors
2020-08-25 11:08:13 -04:00
5be35e8bab
Adding a study sponsors script to return details about study sponsors
2020-08-25 10:30:46 -04:00
182e375fdc
Adds a test for string manipulation
2020-08-21 13:46:10 -04:00
4dc98a6b6b
Injects current user into task data.
2020-08-21 13:34:37 -04:00
66e49a347a
Minor tweaks to the eval endpoint, which should take both the expression and the data as one data structure.
2020-08-20 16:13:48 -04:00
7f60a19d55
Merge pull request #189 from sartography/feature/documents_publishing
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Update github routines to use branches
2020-08-17 15:52:47 -04:00
8f5488d910
Don't raise an error when validating workflows that use the ldap script.
2020-08-17 15:45:37 -04:00
35b1b20960
Merge remote-tracking branch 'origin/dev' into feature/documents_publishing
2020-08-17 15:19:24 -04:00
d4c5e297cc
Merge remote-tracking branch 'origin/dev' into fix/delete_workflow_endpoint
2020-08-17 15:09:11 -04:00
32d47c1417
Merge remote-tracking branch 'origin/dev' into fix/delete_workflow_endpoint
2020-08-17 15:08:44 -04:00
c09441d019
Merge branch 'dev' into fix/delete_workflow_endpoint
2020-08-17 15:07:58 -04:00
dbd0dbf608
mend
2020-08-17 14:56:24 -04:00
85ad477b2b
Some minor cleanup on the study status and automatic events. I wanted to avoid having one database model automatically generating other database models as a side effect. The study service now has full responsiblity to recording study events.
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To help in running tests, adding __init__.py methods to all the test directories.
2020-08-17 14:56:00 -04:00
2bd906e96d
Update github routines to use branches
2020-08-14 11:04:22 -06:00
4f05d99cf0
Fixing typo
2020-08-14 08:48:08 -06:00
369fe4bb35
Automatic events refactoring
2020-08-14 08:36:46 -06:00
aa010272cc
Automatic event creation in study creation
2020-08-14 08:36:10 -06:00
c57ac6d302
Merge pull request #185 from sartography/feature/107_current_user_info
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calling ldap with no argument will return information about the curre…
2020-08-14 09:18:10 -04:00
08c24b7441
Merge pull request #184 from sartography/PMI_fix
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Pmi fix
2020-08-14 09:17:58 -04:00
c12e2b97f3
calling ldap with no argument will return information about the current user.
2020-08-13 21:09:52 -04:00
1a963cf940
Merge branch 'dev' into PMI_fix
2020-08-13 20:49:45 -04:00
29f53e763c
fixing other tests realted to lookups.
2020-08-13 20:27:51 -04:00
e29134a019
fixing a few tests realted to stop words.
2020-08-13 18:35:24 -04:00
32d1036041
Cleaning up the tests.
2020-08-13 18:15:10 -04:00
9a5c1d7cfb
I may have finally wrapped my head around full text search in python. Now properly using an index based on simple rather than english dictionary which has far fewer stop words and stemming processes and plays much better to the type ahead search we are trying to provide.
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Stop words are no longer excluded, so "other" is a valid search and gets a result.
2020-08-13 18:13:41 -04:00
7bfcdd53cd
Merge branch 'dev' into cr-workflow-108
2020-08-12 10:50:19 -04:00
c4a15be90c
Change dmn files to python standard,
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NB: this means mostly false=>False and true=>True
We may have to decide if we want to add false and true as extensions in the python namespace.
2020-08-12 10:48:59 -04:00
9a31d591ae
Adds user uid and cascades study event in study model. Fixes migration to properly downgrade enums.
2020-08-12 10:13:23 -04:00
79c14ad23c
Unlinking file from workflow instead of trying to delete it
2020-08-10 22:23:20 -06:00
cef7c48be2
Adding tests
2020-08-10 21:18:41 -06:00
623ecbae8e
Add IRB test
2020-08-07 09:59:53 -04:00
1ab765b50b
Add test for PMI problem
2020-08-06 10:29:14 -04:00
2846bf9451
Fleshes out fake PB response, so workflows that pull from PB actually trigger validation errors
2020-08-04 15:50:29 -04:00
50b207307a
Merge branch 'dev' into feature/update_study_status_latest
2020-07-31 14:26:24 -06:00
4fcba113b8
Fixing tests
2020-07-31 11:49:04 -06:00
864fd0ad40
Merge branch 'dev' into feature/admin_impersonations
2020-07-31 13:28:56 -04:00
c8881cbf91
Merge branch 'dev' into feature/approvals_dashboard_prototype
2020-07-31 12:17:22 -04:00
5d23223e51
New study status update
2020-07-30 21:03:11 -06:00
73699e66bd
Merge branch 'dev' into feature/admin_impersonations
2020-07-30 17:36:20 -04:00
9704cbcb26
Modifications to the ldap scripts to bring them back in line with what Kelly is doing with the evaluation process.
2020-07-30 13:35:20 -04:00
f8944da31f
Merge branch 'dev' into feature/admin_impersonations
2020-07-30 13:01:46 -04:00
faba0f55ab
Adds AdminSession model and refactors impersonation methods to use it.
2020-07-30 12:40:53 -04:00
a6ec0c92c7
Merge remote-tracking branch 'origin/dev' into cr-connect-106-augment-eval-methods
2020-07-30 11:38:47 -04:00
44deee12de
Merge branch 'dev' into feature/improved_task_event_api
2020-07-30 11:28:52 -04:00
37d1ba5d5a
Merge pull request #160 from sartography/feature/ldap_lookup_script
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Ldap lookup script
2020-07-30 11:27:38 -04:00
bf4d882519
Merge branch 'dev' into feature/ldap_lookup_script
2020-07-30 11:19:24 -04:00
aa0f24bd33
Fully deletes users from g in test tearDown
2020-07-30 10:40:06 -04:00
31982f81ae
Merge branch 'dev' into feature/documents_publishing
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# Conflicts:
# Pipfile.lock
2020-07-30 10:17:08 -04:00
1b0ebecbf4
Uses Flask session to store impersonation state.
2020-07-30 10:17:02 -04:00
d301e9e6fa
Adds list_users endpoint. Adds admin impersonate uid parameter to user endpoint. Adds some utility methods to user service. Refactors authentication tests.
2020-07-29 22:47:47 -04:00
de49397549
Adjustings tests for protocol builder status changes
2020-07-29 10:51:34 -06:00
73a6b7adf1
Fixing tests
2020-07-29 10:25:57 -06:00
6aa21638de
Updating properly study status & fixing tests
2020-07-29 10:25:57 -06:00
f897ee3aea
Merge branch 'feature/approvals_dashboard_prototype' into feature/admin_impersonations
2020-07-29 10:32:46 -04:00
0ea4c13d09
Convert protocol builder status to always be in lower case in order to better match the front end. And also fixing an issue with the multi_instance that is oddly broken suddenly, and I don't know why.
2020-07-28 17:16:48 -04:00
79adb673f2
Fixes display_name custom properties
2020-07-28 14:04:18 -04:00
4d11fc04a0
dropping the "read_only" flag in favor of a "do_engine_steps" flag, which more clearly defines what is happening.
2020-07-28 13:51:29 -04:00
f15626033d
Allow the workflow to be requested without making changes to the workflow - requires that you specify a read_only flag of true, otherwise it assumes that you want a fully prepared workflow with the next ready task set to run.
2020-07-28 13:33:38 -04:00
300026cbc8
Expanding the task events endpoint to accept workflow and study ids as additional filters.
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Removing events from the study endpoint, too noisy.
2020-07-28 10:16:48 -04:00
0cb480801b
Provide event data on the Study api endpoint.
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Speed up the tests a little, because that got out of hand. Need to dig into what is causing this problem.
2020-07-27 17:05:01 -04:00
8d42d520a0
Adding events to the study that is returned via the api.
2020-07-27 16:32:23 -04:00
de0fe705c3
Wrapping LOCKED task update attempt into a try-catch block for tests
2020-07-27 14:00:44 -06:00
452f2c3723
Building out a user service for getting the current user, it will provide a number of functions, one of which will allow administrative users to impersonate other users in some circumstances (but will assure that we log events correctly when an impersonation occures)
2020-07-27 14:38:57 -04:00
0d2cb8c1b8
Correcting an issue with the Navigation where it did not correctly handle looking back to a previous task within the workflow.
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In some cases the session was not getting committed, leaving rogue assignments outstanding for a workflow.
2020-07-27 12:36:20 -06:00
6379b26a71
Add a few more details to the workflow metadata model.
2020-07-27 12:34:25 -06:00
cc55aed89c
Change exception name
2020-07-27 12:18:28 -04:00
70ad3872a7
Fix several bugs, most had an issue with the bpmn document
2020-07-27 12:02:34 -04:00
824582dab1
Hot fix to correct for a failing test due to updates in Spiffworkflow library,
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and modifying the token authorization so that we can log in as different users when not in production mode.
2020-07-27 11:25:29 -04:00
a124e13c6a
Replace all legacy style calls with new calls.
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Still having issues where we try to eval an empty definition, not quite sure why there is a difference from what we had before. I may need to revert some of it and determine what is going on.
2020-07-24 14:33:24 -04:00
f5ab283538
Test of adding in the ability of augmenting the workflow to include internal scripts like StudyInfo
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This is the first waypoint on a larger effort to make all of the 'special scripts' that currently require a shebang to be just another python function.
2020-07-24 12:08:46 -04:00
ce8d7cad16
We resolved a problem with a test with some changes to Spiff, change the correct so that it is correct.
2020-07-23 14:56:12 -04:00
74e5e07114
Testing for all values
2020-07-23 07:41:29 -06:00
aa7437bfc4
Merge branch 'dev' into feature/approvals_dashboard_prototype
2020-07-22 13:08:32 -04:00
a243c14d75
Updating to lastest spiffworkflow which uses box to support dot notation.
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Adding a new endpoint for evaluating the results of a python expression into the tools section of the api.
2020-07-22 11:30:16 -04:00
41cbce8e01
Updating bpmn test
2020-07-21 21:08:08 -06:00
522f848682
Addressing feedback
2020-07-21 20:54:03 -06:00
313770d538
Ldap lookup script
2020-07-21 20:54:03 -06:00
3d9eeab502
Add a few more details to the workflow metadata model.
2020-07-21 15:18:08 -04:00
d01b30debc
Building the start of an endpoint that could be used by logged in / authenticated users that will evaluate basic python functions sent in via the API.
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The hope here is that we can process these in real time for the front end, but still do it using the same evaluation engine we use everywhere else, so
the syntax for things like hide-expressions can be properly verified during workflow validation and will be assured to work during front end rendering.
Removing any all javascript code in the BPMN models.
2020-07-21 13:57:33 -04:00
6caf44544c
Merge branch 'dev' into cr-connect-92-scripting-enhancements
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# Conflicts:
# crc/static/bpmn/ind_supplement/ind_supplement.bpmn
# tests/workflow/test_workflow_service.py
2020-07-20 13:01:23 -04:00
dd0f984347
Drop backwards compatibility of scripts. While this will cause some initial pain, it's less confusing and error prone, and we are still in the development phase of the project. Were this going straight to production we would likely want to keep this backwards compatibility.
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Don't parse on spaces if this is python code, so we avoid any errors in processing - spaces should be valid.
2020-07-20 12:26:34 -04:00
06430550c8
Dropping the RRT-Data-Fix, it should have come out already, but had a failing test, so pulling it out now rather than delve into what is going wrong with obsolete code.
2020-07-20 11:39:50 -04:00
fcb772c900
Reporting to Sentry all captured exceptions and enabling multiple environments
2020-07-19 16:40:33 -06:00
73400ed6c7
Adding proper tests for files publishing
2020-07-17 16:59:25 -06:00
e82532aad8
Updates IND workflow spec. Fixes validation process to return lookups for enum values.
2020-07-17 11:51:21 -04:00
mike cullerton
Kelly McDonald
Dan
Sartography
Aaron Louie
Carlos Lopez