mike cullerton
6ca8ba3e69
Refactored to use Python tempfile
2021-09-15 13:33:55 -04:00
mike cullerton
c335390025
Bug fix.
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File can already exist if there was a previous problem running the script
2021-09-15 10:30:12 -04:00
mike cullerton
654c87489c
New version of irb_documents spreadsheet, that includes the zip_key_words column
2021-09-14 10:40:47 -04:00
mike cullerton
512cf75df0
Modified to use the new zip_key_words column from irb_documents spreadsheet
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Moved all the code inside the `if` statement
2021-09-14 10:39:53 -04:00
mike cullerton
444e3fa76d
Merge branch 'dev' into zip-documents-379
2021-09-14 09:39:19 -04:00
mike cullerton
5ddff1d1be
Merge branch 'dev' into add-reorder-api-endpoints-444
2021-09-09 13:10:54 -04:00
mike cullerton
9bd012c822
Clean up display_order numbers when reordering.
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This fixes the problem where we have don't have all unique display_order numbers.
I.e., 0, 1, 1, 3, 5
2021-09-08 11:16:49 -04:00
Dan Funk
1e97f0ac31
Merge pull request #368 from sartography/feature/114_read_only_expression
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#114 We just needed to allow read_only_expression
2021-09-03 14:32:56 -04:00
Dan Funk
86c017a6a6
Merge pull request #367 from sartography/value-error-expression-428
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Value error expression #428
2021-09-03 14:32:46 -04:00
Dan Funk
1a008499c4
Merge pull request #366 from sartography/file-id-error-info-449
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Added file_id to some error messages in api.file #449
2021-09-03 14:32:14 -04:00
Dan
5c0d30becb
We just needed to allow read_only_expression
2021-09-03 09:48:16 -04:00
mike cullerton
b88daef4fa
Added task name to the error message, for configurators
2021-08-31 16:17:52 -04:00
mike cullerton
5db5c7ca43
Added file_id to some error messages in api.file
2021-08-31 15:28:21 -04:00
mike cullerton
ed57993f8d
Workflow spec cleanup needs a category_id
2021-08-31 12:17:25 -04:00
Dan
1140b21414
Adding a test that assures we pick up libraries on the remote system when syncing.
2021-08-31 12:07:41 -04:00
mike cullerton
b92676ea75
Make sure we have good display_orders before adding specs and categories
2021-08-31 11:16:27 -04:00
mike cullerton
994ce4008f
Don't let updates to workflow-spec and workflow-spec-category metadata change the display_order
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Force display_order changes to use the new reorder API endpoints
2021-08-31 10:36:22 -04:00
mike cullerton
f6816a2e42
Move display_order cleanup to their own methods
2021-08-31 10:07:38 -04:00
Dan
d17a2c39ed
A little cleanup to assure that when we sync we correctly pick up and associate librarires with a workflow when we sync.
2021-08-30 15:46:16 -04:00
mike cullerton
b76f45368b
Explicitly commit the changes
2021-08-30 15:29:49 -04:00
mike cullerton
7bbb64cf27
Reorder remaining categories after delete
2021-08-30 15:20:45 -04:00
mike cullerton
c275c01526
Reorder remaining workflow specs upon deletion
2021-08-30 14:56:26 -04:00
mike cullerton
eb6b73fde5
Fixed typo where I returned an ApiError, instead of raising it.
2021-08-30 13:55:21 -04:00
mike cullerton
a99818b177
Make sure we don't try to move past the top or bottom of the list.
2021-08-30 11:42:44 -04:00
mike cullerton
070a9c9350
Code for reordering Workflow Spec Categories
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Still need to work on edge cases where you try to move past top or bottom of list
Still need to work on tests
2021-08-30 11:27:07 -04:00
mike cullerton
f2201a3cef
Move business logic to WorkflowService
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Return ordered list of specs
2021-08-30 10:41:08 -04:00
mike cullerton
41414e39c8
First pass at reorder spec code.
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Still need to return list of specs
Still need to work on spec categories
2021-08-27 13:02:49 -04:00
mike cullerton
f639e101b7
Commit the skeleton API endpoints, so we can use them while developing the BPMN side of things.
2021-08-27 11:40:38 -04:00
Dan
083abd1b58
Just being consistent in the names as we named it delete_task_data in the class, but not elsewhere, and since I'm here, using the name I prefer.
2021-08-26 14:22:12 -04:00
mike cullerton
da914be3fa
Add task_spec to data_store
2021-08-26 10:41:09 -04:00
mike cullerton
506157d58a
Add task_spec_name to FileService.add_workflow_file, and script that calls it.
2021-08-26 10:40:47 -04:00
mike cullerton
4c41011299
Add task_spec_name to add_file API call
2021-08-26 10:37:05 -04:00
mike cullerton
3d7dadc319
Model changes and revision file for task_spec column to file and data_store models
2021-08-26 10:36:10 -04:00
mike cullerton
ea08643bcd
Script to delete files and task_events associated with a task
2021-08-26 10:34:21 -04:00
mike cullerton
d990a5636f
Grabbed the latest irb_documents spreadsheet, because of the new zip columns and updated categories
2021-08-26 08:43:11 -04:00
mike cullerton
fb5b7f72d8
New script to created a zipped file of irb_documents for use as an email attachment.
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The script accepts a list of file_ids, and generates a list of documents from these ids.
The documents are stored in a directory structure generated from the categories in the irb_documents spreadsheet
2021-08-26 08:31:01 -04:00
Mike Cullerton
961925e03e
Merge pull request #361 from sartography/430-email-enhancements
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#430 email enhancements
2021-08-25 15:02:14 -04:00
Mike Cullerton
fcbbeb4735
Merge pull request #360 from sartography/423-LibraryAppearingInDashboard
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Fixes #423
2021-08-25 15:01:18 -04:00
Dan
4b9c5bd3e8
Fixing a stupid mistake.
2021-08-24 12:10:59 -04:00
Dan
0bd1c282a3
Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev
2021-08-20 13:46:08 -04:00
mike cullerton
32c72c5a40
Modified email script and email_service to accommodate new bcc, reply_to, and attachments arguments
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Modified the email script description to add the new arguments
Cleaned up some import statements
2021-08-19 17:34:55 -04:00
mike cullerton
ef9fd9514d
This caused a key error if we had a repeating field that was unused
2021-08-19 17:32:24 -04:00
Kelly McDonald
76f8f5984e
Fixes #413
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Fixes #423 where a library was showing up in a study workflow
Alex said this used to work, but I don't see where I ever edited the code that needed a filter.
2021-08-19 10:47:13 -04:00
Mike Cullerton
5692f7d377
Merge pull request #359 from sartography/413-LibraryCleanup
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413 library cleanup
2021-08-18 13:39:37 -04:00
Dan
afaecfa21c
Catching an error when variables conflict with repeating section variables.
2021-08-18 13:38:34 -04:00
Mike Cullerton
feb72af32e
Update workflow.py
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Just completing a comment so I understood
2021-08-18 13:27:28 -04:00
Kelly McDonald
b4ecb0f97a
Add backref cascade and make changes to the spot where we delete so it loads objects into memory and then uses the SQLAlchemy plumbing to make sure that the db object gets cleaned up.
2021-08-18 08:25:17 -04:00
Leashys
032aad9bc4
Fixes #383 - Timestamp on files is UTC?
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also this includes the shield test thing for the boolean_type property whoopsie
2021-08-17 13:04:24 -04:00
Dan
7a8eeab820
Merge branch 'dev' into bug/missing_pi_name_246
2021-08-17 11:16:03 -04:00
Dan
6ce560cc2d
Made a stupid mistake in a hot fix, causing the builds to fail.
2021-08-17 10:14:49 -04:00
