ef7ee284b2
Prefer tasks that share a parent over just the the next available task when returning the next_task in the workflow processor.
2021-05-19 16:26:16 -04:00
77f7fec5d4
Merge pull request #312 from sartography/study-is-none-329
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Study is none #329
2021-05-14 16:33:04 -04:00
668e2f4e3c
Merge pull request #313 from sartography/feature/add_file_data_store_properties_to_file
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Assure that any data store values associated with a file come back as…
2021-05-14 16:30:35 -04:00
8e37f27399
Assure that any data store values associated with a file come back as a part of the get_study_data[documents
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] endooint.
2021-05-14 15:52:25 -04:00
e75d933830
Make sure a standalone study does not cause an error in the /task_events api endpoint.
2021-05-14 15:35:17 -04:00
4d7ce5eda9
Merge pull request #311 from sartography/deprecate-study-info-protocol-261
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Deprecate study info protocol #261
2021-05-14 14:14:18 -04:00
1a8c374ac0
Need to mock out these tests
2021-05-14 13:32:25 -04:00
a53e2db223
Final test for study_info script
2021-05-14 13:10:06 -04:00
ade7812540
Merge pull request #310 from sartography/get-primary-workflow-301
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Get primary workflow #301
2021-05-14 12:41:48 -04:00
6a34fc0cde
Merge pull request #309 from sartography/persist-read-only-data-324
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Persist read only data #324
2021-05-14 12:38:48 -04:00
1d28d602d5
Merge pull request #308 from sartography/get-dashboard-url-230
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Get dashboard url #230
2021-05-14 12:36:40 -04:00
b0fcb09581
Fixed test to correspond to the changes in the mock data
2021-05-14 12:35:36 -04:00
99da502912
Merge branch 'dev' into 321-Markdown-Macro
2021-05-14 12:32:41 -04:00
1509bf23f8
Added some detail to the study_details mock data
2021-05-14 12:26:54 -04:00
3e756dd501
Added two more test for the study_info script
2021-05-14 12:26:20 -04:00
885c4c9a20
Started writing tests for the study_info script.
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Need to add some mock data for a couple more
2021-05-13 16:30:17 -04:00
4c8ea14435
Fixed test - changed the method name
2021-05-12 14:07:54 -04:00
8f8d9d30e4
Added test for get_primary_workflow
2021-05-12 13:52:18 -04:00
67321ecd97
Test and workflow for persisting read-only data
2021-05-07 14:07:19 -04:00
4dc4e270aa
Fixed the test to also use HTTPS
2021-05-06 15:54:39 -04:00
375089e5df
test and bpmn file for new get_dashboard_url script
2021-05-06 15:32:28 -04:00
09a395fa34
Start for ticket 230 - Get Dashboard URL
2021-05-06 14:07:21 -04:00
cbd1d01203
Add URL to the study_info('documents') script
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fixes #321 - I merged in branches that fix #320 and #297
320-add-default-for-file-data-get
297-filename-in-documents
2021-05-05 11:30:08 -04:00
8f28970f92
Resolving an alembic conflict.
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Upgrading libraries, and resolving issues from that upgrade, including changes to how we manage tokens. This seems to be working locally.
2021-05-04 13:39:49 -04:00
8b0afa4437
Merge pull request #304 from sartography/irb-info-script-307
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Irb info script #307
2021-05-04 11:40:52 -04:00
34759a2f3d
Merge branch 'dev' into feature/performance-refactor
2021-05-04 11:30:13 -04:00
4780240103
Merge pull request #302 from sartography/320-add-default-for-file-data-get
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Add default capability to file_data_get script
2021-05-04 11:28:40 -04:00
d6054a9846
Merge branch 'dev' into 310-task-event-timezone
2021-05-04 11:21:36 -04:00
77d9bfca43
Merge pull request #296 from sartography/launch-workflow-outside-study-204
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Launch workflow outside study 204
2021-05-04 11:16:08 -04:00
576f3a661d
Removed print statement used while debugging.
2021-05-03 14:52:01 -04:00
c8446bfafd
Mock the Protocol Builder response in my test
2021-05-03 14:51:27 -04:00
9465b6408d
Test and workflow for new `get_irb_info` script
2021-05-01 15:53:43 -04:00
1bcf4ea02e
Test and mock data for new `get_irb_info` service in ProtocolBuilderService
2021-05-01 15:23:07 -04:00
a719cf4bf9
When retrieving the study, only update the status of underlying workflows if specifically requested.
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Record the size of a file in the database for quick access (this helps with a frontend refactor, so it isn't downloading the file just to see it's size)
Cleaning up the timing/performance metric reporting to make it easier to read.
Fixing a bug that prevented non-admins for getting the document-directory
2021-04-30 11:55:12 -04:00
7608a889fb
Add default capability to file_data_get
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script
2021-04-30 10:11:50 -04:00
2b9cee6b89
Update database to include timezone and change all points where we set the time on an event to be utc time. If we get something in the database with a timezone, it will display properly on the front end, but by default everything will be put in the database in UTC
2021-04-29 10:25:28 -04:00
09d8c8bcba
added missing test for update_workflow_spec_category
2021-04-26 12:57:08 -04:00
21e95b106d
Merge pull request #295 from sartography/299-document-datastore
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Add file_data_get and file_data_set functions that can be accessed in…
2021-04-26 12:49:46 -04:00
0aa3e8f586
added missing test for add_workflow_spec_category
2021-04-26 12:41:50 -04:00
047c68b2b5
Just some quick tidying up. Dropping commented out code, and using the SQLAlchemyAutoSchema to handle serializing db models
2021-04-26 12:31:22 -04:00
b73c2ff1cb
Added missing test for `get_workflow_from_workflow_spec`
2021-04-26 12:00:06 -04:00
1a44f50de6
Added `standalone` argument to fix failing test.
2021-04-26 11:21:35 -04:00
39fcab3730
Merge branch 'dev' into launch-workflow-outside-study-204
2021-04-26 10:27:32 -04:00
d3d7eeb309
Add file_data_get and file_data_set functions that can be accessed in a bpmn script function
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Fixes #299
2021-04-26 09:41:14 -04:00
7cca559747
Fixed issue where we were passing in a workflow_api instead of a workflow when completing a form in tests.
2021-04-26 08:58:09 -04:00
c002ef1e76
Added test for new api endpoint to get all standalone workflow_specs.
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Modified test_add_new_workflow_specification to include new standalone argument
2021-04-26 08:56:21 -04:00
54ab7bd2f6
Test and workflow for launching a standalone workflow
2021-04-26 08:53:25 -04:00
a17e1bfaca
When completing a form in a test, check whether workflow is standalone.
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Do not set study_id when workflow is standalone.
*** Note the comment about passing in workflow_spec. We should be passing in a workflow, not a workflow_spec.
2021-04-26 08:50:46 -04:00
6c98e8a2f4
removed duplicate code
2021-04-26 08:47:03 -04:00
dd7c5fd1c1
Fixes #306 assure that we take the doc_code into account if passed in as an argument to the API for get_files.
2021-04-23 16:16:19 -04:00
cf051a7d4f
Merge branch 'dev' into 277-Document-pane
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# Conflicts:
# crc/api/file.py
2021-04-21 14:09:44 -04:00
ecff7d20d3
Adding a test for the new endpoint and cleaning up the API documenation
2021-04-21 14:00:19 -04:00
e2197ddab9
Changes to support the frontend data pane
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fixes #277 and requires frontend branch 277-document-pane
2021-04-20 08:12:27 -04:00
277beb345f
Merge pull request #290 from sartography/auto-set-primary-bpmn-142
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Auto set primary bpmn #142
2021-04-16 13:36:02 -04:00
fdaa069886
Added test for automatically setting the primary bpmn for a workflow spec
2021-04-15 13:29:42 -04:00
8953637466
moved the minimal_bpmn method to base_test
2021-04-15 13:28:03 -04:00
2d4a68da6d
Added test for deleting files on restart.
2021-04-15 11:30:17 -04:00
69396f9888
Modified base_test restart_workflow_api to accept and pass on the new delete_files argument when restarting a workflow
2021-04-15 11:28:35 -04:00
069de83bd5
forgot to include a bpmn for the tests.
2021-04-09 09:02:43 -04:00
6427a54d74
Set the correct default value on enumerations - if it is a multi-select enum (checkbox is set) then it should return a default value of an empty array, and not a dictionary.
2021-04-09 08:40:58 -04:00
41310b6879
Allow both a keyword argument, a single argument when calling delete_file. And call it "delete_file" to be more conssitent with existing scripts.
2021-04-08 13:42:17 -04:00
611c72f431
Merge pull request #284 from sartography/delete-uploaded-file-script-283
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Delete uploaded file script #283
2021-04-08 12:42:30 -04:00
5155db89f9
Added test for deleting multiple files.
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Fixed existing tests to accommodate changes to test workflow bpmn file
2021-04-05 15:13:32 -04:00
70fbd49aab
Modified my test workflow so it works better for testing multiple file deletions
2021-04-05 15:12:14 -04:00
33cef2bd2a
Added tests for failing conditions
2021-04-05 13:19:29 -04:00
c6b1fd4e52
Fix for failing tests. Q_COMPLETE is no longer a column in the PB Mock study table.
2021-04-05 13:18:56 -04:00
61f37ff894
Changed the order of imports so I could debug a failing test
2021-04-05 13:16:43 -04:00
501487b31c
Assure we convert to box for validations as well, and test the bloodly snot out of this.
2021-04-05 12:47:50 -04:00
727aa72e18
Fix a bug from recent performance improvments - be sure that our study info script returns dicts that can be referenced immediately with dot notation, as this is a common pattern in our bpmn script tasks.
2021-04-05 11:31:06 -04:00
9317e49e65
Merge branch 'dev' into delete-uploaded-file-script-283
2021-04-05 10:40:33 -04:00
d81497f8cb
Test and workflow for new script to delete IRB documents
2021-04-05 08:55:41 -04:00
dcb4e7b736
fixing an error by taking a bit of the magic out of one of Mike's regex hinting tools. I figure the hint is still good, and a little less bittle, and all the information is already there if people need to dig.
2021-04-02 17:58:27 -04:00
3ad3a086ba
Merge branch 'dev' into 263-optimize-dashboard
2021-04-02 17:12:02 -04:00
2100f27976
fixing the api.yml file which was starting to throw errors when updating the libraries.
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Seems that sqlalchemy now has a hard time incrementing sequences, so putting in a fix for this.
Upgrading many of our libraries, to avoid any disconnects as we try to handle security patches from these automated bumps.
2021-04-02 17:10:05 -04:00
116bf5e7aa
Merge branch 'dev' into 263-optimize-dashboard
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# Conflicts:
# crc/services/study_service.py
2021-03-31 10:20:33 -04:00
60f5be1aef
Check in - pending change from @cullerton
2021-03-30 12:10:49 -04:00
b5d4df595f
Merge pull request #271 from sartography/master-workflow-status-messages-222
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Master workflow status messages 222
2021-03-26 20:52:24 -04:00
123ec50912
Merge pull request #272 from sartography/infinite-validations-262
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Infinite validations 262
2021-03-26 19:49:42 -04:00
ac4877fecf
Merge remote-tracking branch 'origin/dev' into master-workflow-status-messages-222
2021-03-26 17:47:57 -04:00
3ee8109535
Tests for the changes to master workflow status dictionary
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Test for each valid WorkflowState
Test for all three failure states; not in status, not a dictionary, not a valid state.
2021-03-22 17:52:14 -04:00
47ff29e3ab
Added a test for dictionary output from a decision table.
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Will need dictionary output for master workflow status messages.
2021-03-18 12:25:27 -04:00
c4b52f85af
Test and workflow for testing infinite loop code.
2021-03-17 14:52:50 -04:00
70efdb4788
The `do_task_validate_only` method in the `get_study_associates` script now returns a mocked list of associates.
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It used to return `True`, and this caused shield validation to fail when looping over the results of `get_study_associates`.
(You can't loop over a boolean)
Added a for loop in `study_sponsors_associate.bpmn` to test for this.
Moved `BaseTest` import to the top of `test_study_associate_script` because debug was failing.
2021-03-16 08:57:30 -04:00
14386b8ba9
Merge pull request #264 from sartography/bug/243_complete_all
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Bug/243 complete all
2021-03-14 12:34:55 -04:00
6f80d816cd
My privous efforts didn't take into account the fact that we use dot notation in field names.
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I've re-worked the workflow form endpoint, so that it only accepts the data that should be in the form, and ignores any other values that come back from the front end. It seems Formly has some bugs that were introducing confusing information, and I want everything to behave consistently.
I had to re-work some of the tests, which were relying on an ability to set data through a form post without having a corresponding form to do so.
2021-03-14 12:20:39 -04:00
15c64c862e
Adding an argument to update task that will allow it to complete all remaining tasks through an "update_all" flag,
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this will allow us to remove some fairly complex logic from the front end that isn't behaving properly.
2021-03-12 20:41:07 -05:00
e7c78c8d0e
Merge branch 'dev' into study-associated-email-207-223
2021-03-11 12:38:47 -05:00
b403a3015e
Modified existing tests to work with changes to the email script.
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Added test for associated emails.
Added test for cc argument.
2021-03-11 11:40:46 -05:00
8bda9889b1
Added a test for the send_email endpoint.
2021-03-11 11:38:34 -05:00
fa028dd517
Modified the email_script workflow to accommodate the changes to the email script.
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Workflow now uses keyword arguments; subject, recipients, and cc.
If cc is not passed in, we set it to None.
2021-03-11 11:37:54 -05:00
78ae719b97
Moved this test to the test_email_script test file.
2021-03-11 11:35:08 -05:00
fa4707811e
Removed the test and templates from the unused mails service.
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Mails was removed in previous commit.
2021-03-11 11:34:24 -05:00
eaf52a21ca
Merge pull request #260 from sartography/bug/delete_study
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Allows us to delete a study even if there are emails, and associated …
2021-03-09 13:51:25 -05:00
80ff8a6212
Allows us to delete a study even if there are emails, and associated study users connected to that study.
2021-03-09 13:31:26 -05:00
576aebab19
Sometimes a workflow can be completely broken and unloadable. For instance, it starts off with a engine step / script task that will not execute. So the failure happens the second it is processed. When calling reset on a workflow, we should catch the failure, and reset the workflow, so we aren't trapped in an unrecoverable state.
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To do so, I changed the WorkflowProcessor's reset method to be static, it will try to instantiate the current workflow and execute a cancel_notify event, but if that fails, it will continue and always return a new workflow processor using the latest spec.
2021-03-09 11:52:55 -05:00
7749f3aeaf
Fixed existing workflows to work with keyword arguments
2021-03-09 06:50:58 -05:00
8c75217042
Test and workflow for associated user emails
2021-03-09 06:50:20 -05:00
36dcc58705
Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev
2021-03-08 14:00:14 -05:00
291216e081
Fixing a bug that prevented proper evaluation of a enum field where the default value was null or empty.
2021-03-08 14:00:03 -05:00
f883eb2bbe
We now include field.id in the ApiError message for hidden and default validation. (The field must have a default value or value expression)
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While working on this ticket I found a logic error in the test. I expected both default_value and value_expression. It turns out the default_value is always there, it's just null if we don't set it.
Modified the existing test for hidden and required, and added tests to make sure my passing logic is now correct.
2021-03-04 10:42:13 -05:00
9e758c57d3
Merge branch 'dev' into bug/225_enum_lookup_same_field_name
2021-03-02 14:15:58 -05:00
ecfc2ee761
a slightly better test.
2021-03-02 14:15:29 -05:00
572eb3457a
Merge pull request #252 from sartography/customer-error-messages-192
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Customer error messages 192
2021-03-02 13:45:38 -05:00
06dedd8a32
Add short_title to study, change update_study task to use kw arguments and add the short_title to the update_study script
2021-03-02 10:03:53 -05:00
9a2ffb98ad
Customer Error is in a place that we can try it out on testing.
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So far, there are two known errors.
- Missing condition type (Ticket 178)
- Invalid property value in extensions tab for display_name (No ticket for this error)
We now have the option of using regular expressions to pull task_id, etc. from an error to pass back to the user in the hint.
2021-03-01 16:41:55 -05:00
aac3d5c16e
Bug #255 , this requires the front end to pass in the name of the task, when doing a lookup. This will prevent a bug where we have multiple user tasks, with enum fields that set the same variable, but use different lookup tables to populate the dropbown or search feature.
2021-03-01 14:54:04 -05:00
9d804c36d5
Merge branch 'dev' into customer-error-messages-192.
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Needed some sql changes from dev
2021-03-01 10:29:10 -05:00
0b08a95e25
Add test and make sure that the API endpoint does the right thing when we switch users - checks both associated with access and associated with no access
2021-02-25 12:20:43 -05:00
1504779bba
Make sure we have all test files
2021-02-25 11:40:45 -05:00
a1814a7727
Add some additional comments - just to be clear
2021-02-25 11:40:08 -05:00
55f8825b3c
Make sure we are testing both versions of the setting functions as well as the getting functions
2021-02-25 09:14:24 -05:00
f592a8a0b0
Added a few more tests - I think I need to test one more script endpoint
2021-02-25 09:07:46 -05:00
9bd3aa8dcb
service and scripts with working test - still needs a few more tests to try out, but should work to get Mike going
2021-02-24 12:55:23 -05:00
f937ac3ce9
Getting some thoughts down for the extension property error. This might force us to use regexes for the error service.
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Committing so I can work on another branch.
2021-02-24 10:56:25 -05:00
53fa49e668
Merge pull request #243 from sartography/183-remove-study-approval-code
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Remove Approvals per ticket 183
2021-02-22 18:12:02 -05:00
e0de1d0b3b
Fixed 3 tests to reflect a change in crc.api.workflow.validate_workflow_specification.
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Added a '\n' to the error message between the actual error and our preamble.
2021-02-19 15:55:40 -05:00
003bf2f9b9
Remove Approvals per ticket 183
2021-02-16 09:05:29 -05:00
c40af1d7df
Modified workflow to add form field with period in the id.
2021-02-15 16:36:36 -05:00
446bff9c8c
Modified test for missing default value on hidden and required fields to check for task_id and task_name
2021-02-15 16:28:51 -05:00
34700568ee
Added a test for allowing periods in field ids
2021-02-15 16:28:21 -05:00
39eb5c5c21
This is a decent beginning framework for customer error messages.
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It is not complete, but is in a state where we can start to interact with the front end.
Two tests are failing.
Committing so I can work on an error for Alex.
2021-02-12 14:18:42 -05:00
35773ebc29
Merge pull request #240 from sartography/weird-email-error
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The email script was failing validation because of missing parameters…
2021-02-12 09:31:52 -05:00
d8bd203139
The email script was failing validation because of missing parameters in scripts.email.do_task_validate_only.
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I added a test in tests.test_email_script to make sure we get the default email_address.
I also found and fixed a bug in workflow_service.populate_form_with_random_data where we would overwrite default_values with random text because of a missing continue.
(We don't want to continue if we have repeating fields though.)
2021-02-11 15:36:12 -05:00
fe4e737596
Merge pull request #238 from sartography/value-expression-failing-shield-test-194
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We now allow value_expression to evaluate to an empty string ("") so …
2021-02-11 11:25:09 -05:00
df0cfc755b
Merge pull request #237 from sartography/get-study-from-model-error-191
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We now test whether we have a valid StudyModel when getting a study b…
2021-02-11 11:23:59 -05:00
df25b83958
Merge pull request #235 from sartography/index-error-for-enums-186
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Index error for enums 186
2021-02-11 11:21:50 -05:00
39e874504f
We now allow value_expression to evaluate to an empty string ("") so that we *do not* set a default value for enums in some cases.
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This was causing an error because "" was not an option for the enum.
2021-02-10 14:35:58 -05:00
777cfbdecd
We now test whether we have a valid StudyModel when getting a study by study model.
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We raise an ApiError if the model is None or empty.
2021-02-09 17:37:55 -05:00
11177b4296
Test, workflow, and empty spreadsheet for the new code. The workflow references the spreadsheet, which has no rows.
2021-02-08 15:12:11 -05:00
eb504465f6
Test and workflow for new code.
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We test 2 things.
- If a field can be hidden and required, it must have a default value or value_expression
- If a field is hidden and required, make sure we use the default value
2021-02-08 10:20:05 -05:00
fa34bee18a
First commit for cleaning up error messages for customers.
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This is *not* in a working state.
Committing this so I can work on another ticket.
2021-02-04 11:23:05 -05:00
329146237e
Merge pull request #232 from sartography/boolean-default-values-175
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Boolean default values 175
2021-02-03 16:34:54 -05:00
effd11f947
Merge pull request #231 from sartography/cancellations-137
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Cancellations 137
2021-02-03 16:31:18 -05:00
1eba20f420
Merge pull request #229 from sartography/workflow-spec-order-74
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Workflow spec order 74
2021-02-03 16:18:34 -05:00
1247744463
Test and workflow for new code.
2021-02-03 09:50:37 -05:00
6f7abc0a97
Added tests to test_workflow_restart to make sure we call cancel_notify events when appropriate.
2021-01-29 14:48:35 -05:00
f9e4b6a972
Test and workflow for the new code. We test the correct cancel notify is called, and only when appropriate.
2021-01-29 14:09:42 -05:00
c026717b4a
Changed the call to WorkflowProcessor.reset to reflect the change from class method to instance method
2021-01-29 14:06:25 -05:00
7e76639cf3
When a study is put on hold, we now reset workflows and call any pending cancel_notify events.
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In api.study.update_study we test the study status and call the new WorkflowService method process_workflows_for_cancels.
In services.workflow_service we added the new method process_workflows_for_cancels. It loops through workflows for a study, and resets them if they are in progress.
In services.workflow_processor, we changed the reset method to be an instance method so we can call self.cancel_notify.
In tests.test_lookup_service we changed the call to WorkflowProcessor.reset to reflect the change from class method to instance method
2021-01-29 14:05:07 -05:00
7b91fb9f61
Modified test to check for display_order within workflow category.
2021-01-27 11:08:28 -05:00
cccb722e07
Merge pull request #226 from sartography/enum_default_value_expression_162
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Enum default value expression 162
2021-01-27 10:43:46 -05:00
420ef0b2b0
Test and data for cleaning up my smell. We now test explicitly whether a task has both a default_value and value_expression. If so, we raise an error.
2021-01-27 10:22:43 -05:00
98f946c119
Merge pull request #227 from sartography/missing_form_key_163
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Missing form key 163
2021-01-27 09:42:46 -05:00
d01f8e1018
This workflow had a form with a missing form key, so it's associated test failed after my changes in this ticket. I added a form key to the form. Test now passes.
2021-01-22 12:16:02 -05:00
2438779470
Test and workflow file for missing form key. Ticket 163
2021-01-22 12:14:59 -05:00
1ee6a11d46
Test and associated data files for setting enum default values from value_expression. Ticket 162
2021-01-22 10:01:20 -05:00
5921ce9f10
Merge branch 'dev' into 152-workflow-spec-pull
2021-01-21 12:30:43 -05:00
5b13195182
Merge pull request #224 from sartography/restart-with-no-data-99
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Restart with no data 99
2021-01-20 17:22:18 -05:00
41dac33039
Removed two tests around soft_reset that are no longer required.
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Reset should construct the workflow_processor, thus completing the reset process.
Removed the spec argument from init, as it is never used anywhere.
2021-01-20 13:24:53 -05:00
27a8383898
Not sure about this one. We no longer support the task this test is testing (soft_reset). I commented out that part of the test. We can discuss, if necessary.
2021-01-19 15:44:11 -05:00
61d366c111
Fixed hard_reset test. Now we reset the workflow and run do_engine_steps
2021-01-19 15:39:59 -05:00
61b34fd6f4
Fixed hard_reset test. We now call restart_workflow_api.
2021-01-19 15:34:46 -05:00
1b18b53107
Fixed hard_reset test. We now call restart_workflow_api.
2021-01-19 15:32:38 -05:00
bfb3871671
Added method for restart_workflow_api. Pulled out some common code with get_workflow_api.
2021-01-19 15:27:44 -05:00
9281a93abb
New test for new restart_workflow endpoint
2021-01-19 15:15:44 -05:00
6a9e6d3570
Restart workflow without form data. Committing so Dan can check it out
2021-01-14 15:32:14 -05:00
99c1d1b129
Test for changes to hard_reset and soft_reset
2021-01-13 16:12:14 -05:00
442a4524c4
Test for new functionality and code coverage
2021-01-12 10:18:35 -05:00
abc17add89
file order was not deterministic - alter test to make sure we updated the 'right' file rather than relying on ordering
2021-01-12 08:54:15 -05:00
26655b26d3
merging in dev, and fixing a failing test from dev.
2021-01-08 14:42:13 -05:00
9118517995
Merge pull request #220 from sartography/prevent-duplicate-template-upload-111
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Users cannot upload a workflow_spec_file that already exists. We rais…
2021-01-08 13:55:19 -05:00
be288ae048
Merge pull request #219 from sartography/fix-api-call-missing-fieldname-143
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Fixed ApiError call. Now includes task_id and task_name.
2021-01-08 13:46:26 -05:00
d274813ae5
We now check form field IDs so they play well with Python and Javascript.
2021-01-07 11:10:31 -05:00
c9a4a9685f
Users cannot upload a workflow_spec_file that already exists. We raise an error that is displayed on the fron end.
2021-01-04 15:47:45 -05:00
0ae4448fbe
Fixed ApiError call. Now includes task_id and task_name.
2021-01-04 13:48:34 -05:00
0c47d09972
Ticket 143. Test whether file is uploaded.
2021-01-04 10:53:21 -05:00
80d2009573
Modified the test to cover hold, abandon, and open_enrollment. These are tickets 21 and 94
2020-12-31 10:40:27 -05:00
ede5df4df5
Studies can now be put on hold in the dashboard. We were overriding the status in StudyModel.update_from_protocol_builder.
2020-12-30 17:49:59 -05:00
96739d99c4
Fixing a failing test because new logic was catching a different error.
2020-12-29 11:14:40 -05:00
c288a8a2bc
Merge branch 'dev' into check-field-type#143
2020-12-29 11:11:43 -05:00
052ee40238
Cleanup from test email script changes. Removed commented piece of code containing my private email address.
2020-12-28 18:05:47 -05:00
06318c87b1
Test and workflow for changes to workflow_service. The workflow does not have a field type. We look for evidence of raised exception in data of response.
2020-12-28 18:03:59 -05:00
6cfce839c1
Validation now assures that we won't encounter errors when generating navigation lists.
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Fixing workflow sync paths that were incorrect.
Repairing a suddenly failing test in files, that just don't make no sense.
Bumping spiffworkflow that contains a fix for issue #155
2020-12-28 17:33:38 -05:00
1f9bf72c59
Merge branch 'dev' into bug/navigation
2020-12-14 11:46:44 -05:00
4268d0f482
Merge pull request #208 from sartography/152-workflow-spec-pull
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152 workflow spec pull
2020-12-14 11:35:06 -05:00
bcb78de225
Merge branch 'dev' into bug/navigation
2020-12-14 11:33:51 -05:00
e54404e424
Merge pull request #205 from sartography/test-email-script
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Test email script
2020-12-14 11:28:14 -05:00
6bf24cc438
fixing some failing tests related to changes in the underlying spiffworkflow library.
2020-12-14 11:27:38 -05:00
b62a9c7074
Merge remote-tracking branch 'origin/dev' into bug/navigation
2020-12-14 10:40:21 -05:00
082dee46e0
fixing some failing tests.
2020-12-14 10:37:35 -05:00
d8ac20b1c3
I added a second file to 'random_fact' test workflow, so another test was expecting 2 files in it after adding a new file, but there were 3 -
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Nothing to see here - move along
2020-12-14 10:37:16 -05:00
38a6fa782d
Fixing the email script test.
2020-12-14 10:29:53 -05:00
ee3ee9fd4a
Added tests to cover most of the use cases and code, and a bunch of stuff to make the mocks happy
2020-12-14 10:27:40 -05:00
02ea414b94
Additional fixes to Navigation to allow a nested navigation structure.
2020-12-14 10:07:19 -05:00
7defc2b02f
Tests for uid in logs. Currently we test for uid in a response. This covers ApiError.
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Currently, we don't have a test for Sentry. Unsure how to do this.
Also added a script, service and test workflow to help. (Also to learn about adding a script and service.)
2020-12-11 17:47:53 -05:00
3a1160efac
refactored calls into a service
2020-12-11 11:41:32 -05:00
9eea26e019
add workflow_sync test
2020-12-11 08:34:59 -05:00
32c5060a31
No longer use eval on the email address. It is already parsed.
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Tests for single and multiple emails, and email error checking.
Still need to figure out how to implement multiple emails.
2020-12-09 12:11:46 -05:00
730d0ca18f
Email script now uses an email address instead of a UVA LDAP user_id.
2020-12-07 16:23:41 -05:00
8ba1e90f9a
Test for ticket 153 to include user in error messages
2020-12-07 08:39:00 -05:00
750a202e99
Test and BPMN files for testing email script
2020-12-06 10:22:32 -05:00
93b12a8e82
updates using new navigation from spiff workflow's navigation branch, all tests passing.
2020-12-04 17:56:12 -05:00
e15130e09c
Merge pull request #203 from sartography/151-data-store-exclusive-branch-expression
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Added the ability to use the custom functions within a decision/flow …
2020-12-01 14:44:27 -05:00
94662c560e
Added the ability to use the custom functions within a decision/flow coming off of an exclusive join
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Altered previous test to test this feature
2020-12-01 09:13:12 -05:00
73e01b347b
Ticket #105 . Verify End Event Documentation. Added explicit call to _process_documentation at end of crc.services.workflow_service.test_spec for the end event
2020-11-24 16:51:18 -05:00
a6f9e27ca3
test and bpmn files for ticket #105 (verify end event)
2020-11-24 10:47:20 -05:00
b8a91a513b
Merge pull request #196 from sartography/128-data-store
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128 data store
2020-11-18 18:55:33 -05:00
70c621fe87
fixing the bpmn to use cancel, and pulling in pudates to the spiffworkflow branch.
2020-11-18 16:39:09 -05:00
b83ab1bcd1
Move data store base into its own file.
2020-11-18 15:34:50 -05:00
d198f124d7
Committing a merge from dev
2020-11-18 15:33:44 -05:00
c62b73a539
drop some of the test-only api endpints and rework the tests so they aren't needed
2020-11-18 15:04:36 -05:00
72ade3c367
Add crosstalk test
2020-11-17 10:29:49 -05:00
e9979efb0d
Add some tests
2020-11-17 09:33:29 -05:00
a2dc3c4812
Use Cancel Event
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New title 'New Title'
2020-11-16 09:59:22 -05:00
9a4d167dcd
Add in api changes
2020-11-11 09:44:58 -05:00
3ba11f5e6b
add user_data_get/set and alter test so that it ensures that we don't grab study_data stuff from the user_data calls
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change the test to mock up the user.
2020-11-10 10:32:37 -05:00
92595e3c42
base_test didn't 'know' about the DataStoreModel so it wasn't creating the data_store table, causing a lot of problems after the initial setup/teardown
2020-11-10 09:33:54 -05:00
69fe55aa56
Add mostly-working elements of the data-store, compare with dev to see why db is not working after running tests
2020-11-10 08:24:17 -05:00
245124779e
Add mostly-working elements of the data-store, compare with dev to see why db is not working after running tests
2020-11-10 08:21:46 -05:00
e598994d34
Change the study_sponsors script so that we can actually call it :
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var = study_info('sponsors')
to keep it more in line with other scripts that we have
2020-11-05 10:31:47 -05:00
a78af4eab8
Run cancel task during interrupt. Currently this uses Signal event. We may change this to the Cancel event.
2020-11-04 14:37:53 -05:00
8b23cdc05c
commit changes before switching branches
2020-10-09 08:46:14 -04:00
b2aede2b8d
Glob on windows seems to return directories where in linux it does not, so now assuring we don't try to add files from the sub-directory.
2020-10-05 17:35:35 -04:00
014a4d9757
Fixing a failing test and updating the personnel.
2020-09-02 08:24:48 -04:00
b544334f45
1. Updating Personnel BPMN diagram to debug some issues.
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2. Disabling the token timeout for now, to see if this corrects the issues Alex is having with lost work.
3. Raising more thoughtful error messages for unknown lookup options.
4. Providing better validation of default values and injecting the correct value for defaults related to enum lists of all types.
5. Bumping Spiffworkflow library which contains some better error messages and checks.
2020-09-01 15:58:50 -04:00
1052dff549
Merge remote-tracking branch 'origin/dev' into feature/python_eval
2020-08-27 14:33:16 -04:00
b39fd73bc0
fixing a failing test due to changes in the master bpmn for CRC
2020-08-27 14:06:03 -04:00
5dacc46600
Adding some additional bpmns from Staging server to include in tests.
2020-08-27 14:00:45 -04:00
53d09303d8
Validating that field properties are valid - they must exist as constants on the Task model.
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Making all the lookup field names consistent.
Fixing the lookup service which was failing at times trying to find the correct field to use for building the lookup table.
Updating validation to check for additional fields and properties.
When connexion level errors occur, wrapping it in an API Error to be consistent.
2020-08-27 14:00:14 -04:00
23fd1fbfa0
Removing a rogue file.
2020-08-25 11:15:43 -04:00
d31fd47837
Merge branch 'dev' into feature/python_eval
2020-08-25 11:08:42 -04:00
8dcb598a24
Adds unit test for ProtocolBuilderService.get_sponsors
2020-08-25 11:08:13 -04:00
5be35e8bab
Adding a study sponsors script to return details about study sponsors
2020-08-25 10:30:46 -04:00
182e375fdc
Adds a test for string manipulation
2020-08-21 13:46:10 -04:00
4dc98a6b6b
Injects current user into task data.
2020-08-21 13:34:37 -04:00
66e49a347a
Minor tweaks to the eval endpoint, which should take both the expression and the data as one data structure.
2020-08-20 16:13:48 -04:00
7f60a19d55
Merge pull request #189 from sartography/feature/documents_publishing
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Update github routines to use branches
2020-08-17 15:52:47 -04:00
8f5488d910
Don't raise an error when validating workflows that use the ldap script.
2020-08-17 15:45:37 -04:00
35b1b20960
Merge remote-tracking branch 'origin/dev' into feature/documents_publishing
2020-08-17 15:19:24 -04:00
d4c5e297cc
Merge remote-tracking branch 'origin/dev' into fix/delete_workflow_endpoint
2020-08-17 15:09:11 -04:00
32d47c1417
Merge remote-tracking branch 'origin/dev' into fix/delete_workflow_endpoint
2020-08-17 15:08:44 -04:00
c09441d019
Merge branch 'dev' into fix/delete_workflow_endpoint
2020-08-17 15:07:58 -04:00
dbd0dbf608
mend
2020-08-17 14:56:24 -04:00
85ad477b2b
Some minor cleanup on the study status and automatic events. I wanted to avoid having one database model automatically generating other database models as a side effect. The study service now has full responsiblity to recording study events.
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To help in running tests, adding __init__.py methods to all the test directories.
2020-08-17 14:56:00 -04:00
2bd906e96d
Update github routines to use branches
2020-08-14 11:04:22 -06:00
4f05d99cf0
Fixing typo
2020-08-14 08:48:08 -06:00
369fe4bb35
Automatic events refactoring
2020-08-14 08:36:46 -06:00
aa010272cc
Automatic event creation in study creation
2020-08-14 08:36:10 -06:00
c57ac6d302
Merge pull request #185 from sartography/feature/107_current_user_info
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calling ldap with no argument will return information about the curre…
2020-08-14 09:18:10 -04:00
08c24b7441
Merge pull request #184 from sartography/PMI_fix
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Pmi fix
2020-08-14 09:17:58 -04:00
c12e2b97f3
calling ldap with no argument will return information about the current user.
2020-08-13 21:09:52 -04:00
1a963cf940
Merge branch 'dev' into PMI_fix
2020-08-13 20:49:45 -04:00
29f53e763c
fixing other tests realted to lookups.
2020-08-13 20:27:51 -04:00
e29134a019
fixing a few tests realted to stop words.
2020-08-13 18:35:24 -04:00
32d1036041
Cleaning up the tests.
2020-08-13 18:15:10 -04:00
9a5c1d7cfb
I may have finally wrapped my head around full text search in python. Now properly using an index based on simple rather than english dictionary which has far fewer stop words and stemming processes and plays much better to the type ahead search we are trying to provide.
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Stop words are no longer excluded, so "other" is a valid search and gets a result.
2020-08-13 18:13:41 -04:00
7bfcdd53cd
Merge branch 'dev' into cr-workflow-108
2020-08-12 10:50:19 -04:00
c4a15be90c
Change dmn files to python standard,
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NB: this means mostly false=>False and true=>True
We may have to decide if we want to add false and true as extensions in the python namespace.
2020-08-12 10:48:59 -04:00
9a31d591ae
Adds user uid and cascades study event in study model. Fixes migration to properly downgrade enums.
2020-08-12 10:13:23 -04:00
79c14ad23c
Unlinking file from workflow instead of trying to delete it
2020-08-10 22:23:20 -06:00
Dan
Mike Cullerton
mike cullerton
Kelly McDonald
Sartography
Aaron Louie
Carlos Lopez