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Author SHA1 Message Date
Dan
2a1d531b5e adding back in a default port, not sure how this might be interacting badly with mesosphere, but this commit maybe caused the problem? 2021-07-22 18:16:02 -04:00
Dan
f6612a65d5 Creating a SERVER_NAME environment variable that should help in cases where we don't have an http request (ie, a scheduled task is executing workflows) but we still want to create emails and do other things that tend to be based on a request. SERVER_NAME is a standard Flask config setting that we must have dropped along the way somewhere. 2021-07-22 17:40:19 -04:00
Dan
7f5c7417d8 Print out some additional debugging information in the email script so we can tell what is happening and where. 2021-07-22 16:02:08 -04:00
Dan Funk
61504664d4
Merge pull request #346 from sartography/bug/346_timer_fails_to_send_email 
fixes #346, allow emails to fire in scheduled events
 2021-07-22 13:40:12 -04:00
Dan Funk
52ce171a8a
Merge pull request #344 from sartography/ldap-issues-394 
Ldap issues #394
 2021-07-22 13:39:29 -04:00
Dan Funk
7369c7615e
Merge pull request #341 from sartography/no-reset-db-385 
Trying to keep humans from accidentally resetting the database #385
 2021-07-22 13:35:35 -04:00
Dan
2009a794ea We were depending on an active http request existing in order to fire emails, using that request to determine the front end url. We have the frontend url in our config file, and we don't have a request object when running scheduled tasks, so I just use our configuration setting instead. 2021-07-22 13:25:06 -04:00
mike cullerton
6b51fc7c06 Added a test with uppercase UID 
Modified the script test to expect an empty dictionary now, instead of raising an error
 2021-07-22 10:47:25 -04:00
mike cullerton
8df1145471 Modify the LDAP service to only use lowercase UIDs. 
UVA always returns the UID as lowercase.
This caused a postgres unique value problem for us.
 2021-07-22 10:46:09 -04:00
mike cullerton
428802b9d0 Modify LDAP script so that it doesn't raise an error when we don't get a record back from LDAP. 
We now return an empty dictionary
 2021-07-22 10:44:41 -04:00
Dan
dd67a5e650 Never set the date to datetime.utcnow() on DateTime fields. We want this to fall back on the func.now() method and allow the database to set the time on insert. 2021-07-12 15:58:32 -04:00
mike cullerton
4fb8321675 Trying to keep humans from accidentally resetting the database 2021-07-12 15:00:32 -04:00
Dan
1f0b881b92 Hot patch, merging two heads. 2021-07-12 11:14:31 -04:00
Mike Cullerton
522ca9d164
Merge pull request #340 from sartography/bug/better_errors_on_scheduled_tasks 
Assure we log reasonably clear errors when executing scheduled tasks …
 2021-07-12 10:13:02 -04:00
Mike Cullerton
d1bf370a39
Merge pull request #339 from sartography/restrict-loaded-studies-374 
Restrict loaded studies #374
 2021-07-12 10:11:34 -04:00
Mike Cullerton
7070761089
Merge pull request #338 from sartography/document-spreadsheet-name-380 
Document spreadsheet name #380
 2021-07-12 10:11:16 -04:00
Dan
f982745d32 fixing a failing test, don't assume the study and workflow ids will always be 1. 2021-07-12 10:00:39 -04:00
Dan
1916c4ff54 Assure we log reasonably clear errors when executing scheduled tasks in the background, so that sentry can pick them up and they can be addressed effectively. 2021-07-12 09:43:12 -04:00
mike cullerton
69974e89fd Added 2 simple tests for filtering by REVIEW_TYPE 2021-07-09 11:39:30 -04:00
mike cullerton
682b010f6f Added mocked study_details with an invalid REVIEW_TYPE 
This is used to test StudyService.get_studies_for_user
StudyService.get_studies_for_user should now filter on REVIEW_TYPE
 2021-07-09 11:38:45 -04:00
mike cullerton
445d3e5f0b Added mocked pb study_details since we now check whether a study has valid REVIEW_TYPEs 2021-07-09 10:41:46 -04:00
mike cullerton
95c710768e Fixed test to reflect adding REVIEW_TYPE to mocked study_details PB data 2021-07-09 10:40:18 -04:00
mike cullerton
841bbe73ef Added REVIEW_TYPE to the mocked PB data 2021-07-09 10:38:41 -04:00
mike cullerton
690c059335 get_studies_for_user is no longer a static method 2021-07-09 10:37:57 -04:00
mike cullerton
dad2de9f0c get_user_studies now checks study_details['REVIEW_TYPE'] before displaying a study. 
This corresponds to REVIEWTYPENAME being `Full Committee`, `Expedited`, `Non-UVA IRB Full Board`, or `Non-UVA IRB Expedited`
 2021-07-09 10:37:25 -04:00
mike cullerton
05ba28b67b Merge branch 'dev' of https://github.com/sartography/cr-connect-workflow into dev 2021-07-07 14:33:17 -04:00
mike cullerton
1c9db16bff Migration to change filename from irb_documents to documents in the database 2021-07-07 13:27:57 -04:00
mike cullerton
f1a15ef8e9 Fix the test 2021-07-07 12:54:16 -04:00
mike cullerton
d6f9b013f7 Change irb_documents to documents 2021-07-07 12:54:03 -04:00
mike cullerton
23180908c8 Undo change. Wrong branch 2021-07-07 12:43:51 -04:00
mike cullerton
c39e08972d Change irb_documents to documents 2021-07-07 12:42:01 -04:00
Dan Funk
8374ae3fde
Merge pull request #332 from sartography/add-name-error-hint-8 
Add name error hint #8
 2021-07-07 11:35:45 -04:00
Dan Funk
3c52453c26
Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:35:24 -04:00
Dan
bef35e4bec Upgrading Spiffworkflow, just incorporating some additional tests. 2021-07-07 11:34:33 -04:00
Dan Funk
2ed436327f
Merge pull request #333 from sartography/check-study-script-273 
Check study script #273
 2021-07-07 11:28:32 -04:00
Dan Funk
db9b228735
Merge pull request #334 from sartography/WaitingEventsHotPatch 
Make a change so that anything that has a waiting event is labeled in…
 2021-07-07 11:27:10 -04:00
Dan Funk
8cb7cbc0ad
Merge pull request #337 from sartography/add-by-user-61 
Add by user #61
 2021-07-07 11:25:45 -04:00
Dan
2a45f2fcda Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:24:00 -04:00
mike cullerton
b0cf74fa3d Merge branch 'dev' into add-by-user-61 
# Conflicts:
#	tests/files/test_files_api.py
 2021-07-07 10:46:50 -04:00
mike cullerton
ac19c3e3c6 Add users first 2021-07-07 10:33:30 -04:00
Dan Funk
5c229477d3
Merge pull request #336 from sartography/feature/better_errors 
Feature/better errors
 2021-07-07 10:30:41 -04:00
mike cullerton
621c11fe24 Add test for user_uid 2021-07-07 09:39:01 -04:00
mike cullerton
c11b5cfb29 Add user_uid to api output 2021-07-07 08:18:02 -04:00
Dan
fb54edac1c Adding additional details to error messages, and cleaning up the cruft around these messages to keep them clear and succinct. 
Most noteable is the addition of the line on which the error occurs for script tasks.  It will report the line number and pass back the content of
the line that failed.
The validator only returns the first error it encounters, as it's clear that all we ever get right now is two of the same error.
Did a lot of work between this and spiffworkflow to remove all the places where we obfuscate or drop details as we converted between workflowExceptions and APIExceptions.
Dropped the python levenshtein dependency, in favor of just rolling a simple one ourselves in Spiffworkflow.
 2021-07-07 00:53:49 -04:00
mike cullerton
894377a607 Add user_uid to FileDataModel calls 2021-07-06 17:09:00 -04:00
mike cullerton
23be257db0 Add user_uid column to file_data table 2021-07-06 17:07:47 -04:00
Dan
a9805ad40c Adding some documentation for clarity. 2021-07-06 14:40:20 -04:00
Dan
cafdc4d100 Removing an unneeded modification to the database structure for lookup tables. 2021-07-06 14:02:07 -04:00
Dan
04842aa66b Undo change to 1 minute. 2021-07-06 13:13:07 -04:00
Dan
7aa4b0833c Merge remote-tracking branch 'origin/dev' into feature/documents_xls_refactor 2021-07-06 13:11:08 -04:00