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cr-connect-workflow
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2408 Commits

Author SHA1 Message Date
alicia pritchett 962cf7c32c Fixes problem with initializing some task data fields 
we had a problem where sometimes, task data gets some values set in its fields to None, which conflicts with default values. this fixes that
 2021-12-10 11:33:26 -05:00
mike cullerton 52baf25459 In `WorkflowService.do_waiting`, if a workflow causes an exception, change its status from `waiting` to `erroring` so we don't continue to call it in `do_waiting`. 2021-12-09 15:33:39 -05:00
mike cullerton 49ba36c95e Use one of the new statuses in the test. 
Fix bug in validation test
 2021-12-09 13:33:20 -05:00
mike cullerton ac82187bac We need a migration for the new study statuses 2021-12-09 13:32:21 -05:00
Dan 06960644fa #557 - scheduler recursion because each call to 'process_witing_tasks' would kick off an additional scheduler by settting up a new app_context. 2021-12-09 08:54:44 -05:00
Dan Funk 23fa28bc23
Merge pull request #434 from sartography/bug/ldap_service_rollback_expoded_the_world 
The LDAP service didn't do a good enough check to see if the record w…
 2021-12-09 06:42:02 -05:00
Dan 412290f2ab The LDAP service didn't do a good enough check to see if the record was already in the database. This caused an error, which left the workflow in a waiting state. And that waiting state meant the error would just happen a million times over again until we pushed up this code change. 2021-12-09 06:33:30 -05:00
Dan Funk 350c4be9c0
Merge pull request #433 from sartography/more-study-statuses-562 
New study statuses #562
 2021-12-08 12:59:48 -05:00
mike cullerton 6db9cdabc7 New study statuses 2021-12-08 10:50:30 -05:00
Dan Funk 0cfa59bfea
Merge pull request #429 from sartography/chore/clear-form-data-553 
Fixes #553 - Don't load Form data
 2021-12-08 10:37:44 -05:00
Dan Funk b28ddef842
Merge pull request #430 from sartography/study-status-scripts-556 
Study status scripts #556
 2021-12-08 10:36:53 -05:00
Dan Funk c3513cc6e8
Merge pull request #432 from sartography/bug/task_data_overwrite_by_previous_submission 
assure we don't overwrite task data with a previous form submission i…
 2021-12-08 10:36:27 -05:00
Dan ffafc1674a assure we don't overwrite task data with a previous form submission if that data already exists. 2021-12-07 17:04:20 -05:00
Dan Funk 14438f0073
Merge pull request #431 from sartography/user-studies-endpoint-561 
User studies endpoint #561
 2021-12-07 10:15:42 -05:00
mike cullerton 4ea3682dd6 Updated for new ProtocolBuilderCreatorStudy model and schema 
Removed unused imports
 2021-12-06 14:43:07 -05:00
mike cullerton 9785a2fe5a Updated for new ProtocolBuilderCreatorStudy model and schema 
Added with `session.no_autoflush` to stop rollback during test
 2021-12-06 14:42:34 -05:00
mike cullerton d08b2a8562 Updated for new ProtocolBuilderCreatorStudy model and schema 
Removed unused imports
 2021-12-06 14:40:56 -05:00
mike cullerton d0ddc7a00f Updated to match new UVA API endpoint 2021-12-06 14:39:49 -05:00
mike cullerton 8813098190 Updated to use new ProtocolBuilderCreatorStudy model and schema 2021-12-06 14:37:42 -05:00
mike cullerton db1f3ba6ab Model and schema for new StudyCreator api endpoint 
Update StudyModel to use new model
 2021-12-06 14:36:34 -05:00
alicia pritchett 22320efad4 test for this ticket 2021-12-03 12:23:57 -05:00
mike cullerton 791328d520 Don't need to ask the question twice 2021-12-03 12:18:17 -05:00
mike cullerton 7ca7de177e Removed print statements 2021-12-03 11:55:35 -05:00
mike cullerton 6be9529b22 Fixed the class names 2021-12-03 11:53:21 -05:00
mike cullerton fa61aa0354 Tests for set_study_status 2021-12-03 11:45:39 -05:00
mike cullerton 34b4913542 Restructured `do_task` 
Fixed up `do_task_validate_only`
 2021-12-03 11:45:02 -05:00
mike cullerton 52bfa848ac *** WIP *** 
Script to set study status
 2021-12-02 17:11:28 -05:00
mike cullerton 1ed76bf534 test for get_study_status 2021-12-02 15:31:14 -05:00
mike cullerton 8c66a3d2ef Script to get the status of the current script 2021-12-02 15:30:47 -05:00
Dan 5cf011f1d9 Quick fix for ldap. 2021-12-02 12:19:36 -05:00
alicia pritchett 7524e97c9a Fixes #553 - Don't load Form data 
adds an extension so that you can opt to clear out form data on a given task
 2021-12-01 16:11:52 -05:00
Mike Cullerton acf4b5596e
Merge pull request #428 from sartography/bug/555_timer_event 
We were not correctly handing the possibility of there only being a w…
 2021-11-30 13:44:37 -05:00
Dan cf3f8ce444 Missing the bpmns for a test. 2021-11-30 13:29:31 -05:00
Dan 676321c2e2 Fixing a test. 2021-11-30 12:55:52 -05:00
Dan ad93b5fae6 We were not correctly handing the possibility of there only being a waiting task (and no ready tasks). 
We also had a problem with the validator throwing a 500 when it was trying tell us it would never finish validation.
 2021-11-30 12:44:35 -05:00
Mike Cullerton ec9d8f8a5c
Merge pull request #425 from sartography/bug/slow_ldap 
Remove wild-card from uid search, it performs very badly.  Add a bit …
 2021-11-30 11:09:42 -05:00
Mike Cullerton 8cc581611e
Merge pull request #426 from sartography/feature/performance_improvement 
Performance upgrades - study dashboard in less than 2 seconds now
 2021-11-30 11:09:28 -05:00
Dan Funk 8c30df011b
Merge pull request #427 from sartography/workflow-status-script-548 
Workflow status script #548
 2021-11-30 10:51:57 -05:00
Dan Funk c8c8c8b244
Merge pull request #424 from sartography/xls-xlsx-issue-540 
Xls xlsx issue #540
 2021-11-30 10:50:33 -05:00
mike cullerton 0f1ccd7db5 New script to check workflow status. 
Includes test and test workflow
 2021-11-30 08:54:15 -05:00
Dan 455c1035f1 Performance upgrade to script.py - reduce the number of times we generate the augmented list of script functions for running python evals. 
Performance upgrade to study_service.py - Don't query on the whole WorkflowModel, just get the status that we need.  Saves lots of complex joins.
Performance upgrade to SpiffWorkflow - don't convert to box unless we have to do so.
 2021-11-29 17:48:05 -05:00
Dan b9c936da38 Fix the test. 2021-11-29 11:25:45 -05:00
Dan e5b1daa3d9 Remove wild-card from uid search, it performs very badly. Add a bit of logging so we can easily see performance in the future. 2021-11-29 11:03:14 -05:00
Dan 8ec58fd6d7 Assure better error messages when parsing word documents with jinja syntax. 
I also have a pull request into the folks that run the python docx library to improve their error messages that we depend on here.
 2021-11-23 14:38:48 -05:00
Dan 4a1285b8e0 When validating a workflow, don't run the master workflow multiple times, its a huge waste of time. 
Provide decent data when calling get_study_associate(s) scripts.
 2021-11-22 17:17:19 -05:00
Dan 5bb7dbfb19 Improve the error messages returned from jinja template processing. Try to find the actual line with an error in it. 2021-11-22 14:46:33 -05:00
Dan 12b78c1f99 Value Errors should also alert us that we can't serialize the json. 
Enum Label was depending on the options attribute not existing in some situtations, which is a bad assumption.  Rather, check for specific properties, and call back to using options as the default.
 2021-11-22 12:37:10 -05:00
Dan 4d1f4429ff Fixing a bug in enum_label that was not working when lookup up an select list from a spreadsheet. 
Assure we raise more thoughtful error messages when running getting exceptions in engine tasks.
Field Options should always be available now due to a fix in Spiffworkflow.
 2021-11-22 12:26:30 -05:00
Dan 7041c2285b bumping spiffworkflow for some small fixes. 2021-11-18 14:23:55 -05:00
Dan 84fd3da99f Force celery to be <5 to deal with the increasing pain of Connexion. We should definitely kill Connexion and go a diffrent rounte. 2021-11-18 13:32:26 -05:00