Aaron Louie
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9a26fc8e80
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Merge remote-tracking branch 'origin/feature/reference_files' into feature/workflow_spec_categories
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2020-03-18 16:58:57 -04:00 |
Dan Funk
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02be8ede75
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Merge remote-tracking branch 'origin/master' into feature/reference_files
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2020-03-18 15:16:34 -04:00 |
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Aaron Louie
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532d6b5dd6
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Adds CRUD endpoints for workflow spec categories
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2020-03-16 16:30:56 -04:00 |
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Aaron Louie
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7d31bc24eb
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Attempting to address "FutureWarning: Implicit (flask) JSON serialization" warning
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2020-03-16 13:24:15 -04:00 |
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Aaron Louie
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a98251237b
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Adds workflow spec category to API
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2020-03-16 12:10:32 -04:00 |
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Dan Funk
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779674ab60
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Add the ability to upload and request general reference files by name. These will be used across workflows and will frequently contain lookup tables that can be referenced by various script tasks.
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2020-03-13 15:03:57 -04:00 |
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Aaron Louie
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bbfe9291e0
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Adds endpoint to get workflow stats. Adds a test for the endpoint.
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2020-03-11 14:28:53 -04:00 |
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Aaron Louie
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f1b6718068
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Adds task counts
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2020-03-10 15:46:14 -04:00 |
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Dan Funk
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e91d7aff2f
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Fixes #11: adding a delete endpoint for studies. It won't delete studies that have workflows, you have to delete those first)
Removing the "default" error response from the api.yml, it was all noise.
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2020-03-09 15:12:40 -04:00 |
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Dan Funk
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9fcd6f38f4
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Merge remote-tracking branch 'origin/master' into feature/pb_services
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2020-03-05 17:13:41 -05:00 |
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Dan Funk
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e501fb31fd
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Cleaning up swagger docs.
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2020-03-05 17:10:00 -05:00 |
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Dan Funk
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906bacff6a
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Expose a flag on the workflow model in the api to shown if it is using the latest spec. Added a soft_reset and hard_reset onto the workflow endpoint that will allow you to cause a hard or soft reset.
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2020-03-05 16:45:44 -05:00 |
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Aaron Louie
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01720a8bbf
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Replaces migration and fixes broken tests
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2020-03-03 16:02:01 -05:00 |
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Dan Funk
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94f828dfd6
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Adding a simple endpoint that describes what scripts are currently available, along with a brief description.
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2020-03-03 15:30:42 -05:00 |
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Dan Funk
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5e3fdaaa94
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New set of "Tools" api endpoints, that provides a way to quickly render markdown or word documents by uploading json data and a template to populate.
Improved Error messages / Error processing. You can now just throw an APIError anywhere, and it will be properly serialized and returned.
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2020-02-29 17:22:38 -05:00 |
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Aaron Louie
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3ef4860391
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Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
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2020-02-26 18:06:51 -05:00 |
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Aaron Louie
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002207cbca
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Adds redirect URL to login handler
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2020-02-24 16:59:16 -05:00 |
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Aaron Louie
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eb6354db6e
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Moves sso_backdoor parameters to query string. Prevents duplication of user on update.
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2020-02-21 11:24:39 -05:00 |
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Aaron Louie
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581434b453
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Adds SSO header attributes
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2020-02-20 15:43:29 -05:00 |
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Dan Funk
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1a9b5b50e5
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Merge branch 'master' of github.com:sartography/cr-connect-workflow
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2020-02-18 16:39:11 -05:00 |
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Dan Funk
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a642593e3d
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Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
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2020-02-18 16:38:56 -05:00 |
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Aaron Louie
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16db1e3504
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Adds default_value to Task schema
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2020-02-18 10:14:03 -05:00 |
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Aaron Louie
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f142d02a30
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Adds workflow_spec_id back in to WorkflowApi
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2020-02-07 12:36:08 -05:00 |
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Dan Funk
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9bd93748be
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Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
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2020-02-07 11:34:44 -05:00 |
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Aaron Louie
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5a6d589e6d
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Adds form_field_key to API
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2020-02-05 15:06:19 -05:00 |
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Aaron Louie
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3ee0426ba9
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Adds workflow_id to file endpoints.
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2020-02-04 14:26:53 -05:00 |
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Aaron Louie
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e717c25a25
|
Study ID is an integer. Task ID is a string.
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2020-02-03 22:29:41 -05:00 |
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Aaron Louie
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0368657549
|
Adds ability to get FileModel records by study and task
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2020-02-03 21:56:18 -05:00 |
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Aaron Louie
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e4b2a7a641
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Adds endpoint to retrieve all user tasks for a workflow, regardless of state
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2020-01-31 12:40:08 -05:00 |
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Aaron Louie
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918a6d5ab7
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Removes unsupported read-only flag on File schema for now
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2020-01-31 11:33:31 -05:00 |
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Aaron Louie
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a0e60ddd77
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Renames endpoint methods for clarity. Adds endpoint for just updating file info.
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2020-01-31 10:39:19 -05:00 |
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Dan Funk
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3fb831bae4
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When you create a study, all possible workflows are then associated with that study.
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2020-01-30 09:11:17 -05:00 |
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Dan Funk
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acca1523b7
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adding an api call for getting a single workflow spec.
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2020-01-28 10:14:06 -05:00 |
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Aaron Louie
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6aa3d711ce
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Adds endpoint to delete workflow spec
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2020-01-23 16:05:09 -05:00 |
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Dan Funk
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900819e647
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fixing failed run
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2020-01-14 15:39:54 -05:00 |
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Aaron Louie
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7ce48e8deb
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Removes type hinting, in case that's breaking something.
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2020-01-14 15:10:43 -05:00 |
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Aaron Louie
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054bd88760
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Fixes path to api methods
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2020-01-14 14:55:10 -05:00 |
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Aaron Louie
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790b0dfc3a
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Adds endpoint for modifying existing workflow spec
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2020-01-14 14:10:53 -05:00 |
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Dan Funk
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6361e94af5
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Allow submitting data and progressing to the next task in a workflow.
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2020-01-14 11:02:44 -05:00 |
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Aaron Louie
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75881bf1d3
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Adds endpoint for adding a workflow specification
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2020-01-13 21:43:09 -05:00 |
|
Dan Funk
|
a3d7ba8114
|
WIP
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2020-01-07 13:23:46 -05:00 |
Aaron Louie
|
872f3fca1b
|
Returns workflow spec id with Workflow schema
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2020-01-06 09:18:13 -05:00 |
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Aaron Louie
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e75da611ca
|
Adds endpoints for creating and updating a Study.
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2020-01-03 11:44:24 -05:00 |
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Dan Funk
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c4cbaeb64e
|
Refactor models into seperate directories
|
2019-12-31 16:32:47 -05:00 |
|
Dan Funk
|
115a88347f
|
Stupid tag
|
2019-12-30 13:34:18 -05:00 |
|
Dan Funk
|
fb465531ca
|
Add the ability to delete a workflow.
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2019-12-30 13:15:39 -05:00 |
|
Dan Funk
|
2ac2514e32
|
merge conflicts
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2019-12-27 13:53:29 -05:00 |
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Dan Funk
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0b71833946
|
Adding file management. Files are stored in the database along with basic meta data.
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2019-12-27 13:50:03 -05:00 |
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Aaron Louie
|
9b6599505d
|
Adds task title and documentation
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2019-12-20 15:39:02 -05:00 |
|
Aaron Louie
|
dc13855593
|
Adds properties and validation to form
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2019-12-20 14:32:04 -05:00 |
|
Dan Funk
|
bb6ab4b8e8
|
Tasks can have forms and they are returned correctly.
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2019-12-19 11:58:51 -05:00 |
|
Dan Funk
|
fbbd6c6659
|
Adding a workflow from a spec
|
2019-12-18 14:42:40 -05:00 |
|
Dan Funk
|
9861f6baf3
|
Lots and lots of random stuff as I organize code and get things to make sense.
|
2019-12-18 14:02:17 -05:00 |