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Part of the Go project layout migration, item 27. Pure move plus import-path rewrite across 502 files. No API or behaviour change. `internal/` keeps the messaging application logic unimportable from outside the module, which is what the issue asks for -- status-go is consumed through the C-bindings in mobile/, not as a Go library. Things that had to follow the move, beyond the Go imports: - tools/generate-handlers/template.txt. messenger_handlers.go is generated, and the template hard-codes the imports it emits, so the generated file kept importing protocol/common and failed typecheck. - .gitignore. The ignore rule for that generated file was pinned to the old path; without moving it, a 1486-line generated file starts being tracked. - Makefile: the logosstorage and torrent test targets (both the archive packages and ./protocol itself), the archive README, migration-protocol. - scripts/run_unit_tests.sh, which names the protocol package explicitly to shard its tests. - scripts/cleanup_generated_files.sh and .golangci.yml. scripts/migration_check.sh also needed a fix that is not specific to this move: it validated every file the branch touched under a migration dir against the timestamp naming rule, and a directory rename makes every migration in it look newly added. It now excludes renames, so moving a migration is not mistaken for adding one. refs #7067