Up til now, the block dag has been using `BlockRef`, a structure adapted
for a full DAG, to represent all of chain history. This is a correct and
simple design, but does not exploit the linearity of the chain once
parts of it finalize.
By pruning the in-memory `BlockRef` structure at finalization, we save,
at the time of writing, a cool ~250mb (or 25%:ish) chunk of memory
landing us at a steady state of ~750mb normal memory usage for a
validating node.
Above all though, we prevent memory usage from growing proportionally
with the length of the chain, something that would not be sustainable
over time - instead, the steady state memory usage is roughly
determined by the validator set size which grows much more slowly. With
these changes, the core should remain sustainable memory-wise post-merge
all the way to withdrawals (when the validator set is expected to grow).
In-memory indices are still used for the "hot" unfinalized portion of
the chain - this ensure that consensus performance remains unchanged.
What changes is that for historical access, we use a db-based linear
slot index which is cache-and-disk-friendly, keeping the cost for
accessing historical data at a similar level as before, achieving the
savings at no percievable cost to functionality or performance.
A nice collateral benefit is the almost-instant startup since we no
longer load any large indicies at dag init.
The cost of this functionality instead can be found in the complexity of
having to deal with two ways of traversing the chain - by `BlockRef` and
by slot.
* use `BlockId` instead of `BlockRef` where finalized / historical data
may be required
* simplify clearance pre-advancement
* remove dag.finalizedBlocks (~50:ish mb)
* remove `getBlockAtSlot` - use `getBlockIdAtSlot` instead
* `parent` and `atSlot` for `BlockId` now require a `ChainDAGRef`
instance, unlike `BlockRef` traversal
* prune `BlockRef` parents on finality (~200:ish mb)
* speed up ChainDAG init by not loading finalized history index
* mess up light client server error handling - this need revisiting :)
One more step on the journey to reduce `BlockRef` usage across the
codebase - this one gets rid of `StateData` whose job was to keep track
of which block was last assigned to a state - these duties have now been
taken over by `latest_block_root`, a fairly recent addition that
computes this block root from state data (at a small cost that should be
insignificant)
99% mechanical change.
To calculate the deltas correctly, the `process_inactivity_updates` function
must be called before the rewards and penalties processing code in order to
update the `inactivity_scores` field in the state. This would have required
duplicating more logic from the spec in the ncli modules, so I've decided to
pay the price of introducing a run-time copy of the state at each epoch which
eliminates the need to duplicate logic (both for this fix and the previous one).
Other changes:
* Fixes for the read-only mode of the `BeaconChainDb`
* Fix an uint64 underflow in the debug output procedure for printing
balance deltas
* Allow Bellatrix states in the reward computation helpers
Streamline lookup with Forky and BeaconBlockFork (then we can do the
same for era)
We use type to avoid conditionals, as fork is often already known at a
"higher" level.
* load blockid before loading block by root - this is needed to map root
to slot and will eventually be done via block summary table for "old"
blocks
Co-authored-by: tersec <tersec@users.noreply.github.com>
Update several `ncli_db` commands to run in readOnly mode, allowing them
to be used with a running instance - in particular era export.
* export all eras by default
* skip already-exported eras
Notable improvements:
* A separate aggregation pass is no longer required.
* The user can opt to produce only aggregated data
(resuing in a much smaller data set).
* Large portion of the number cruching in Jupyter is now done in C
through the rich DataFrames API.
* Added support for comparisons against the "median" validator
performance in the network.
* limit by-root requests to non-finalized blocks
Presently, we keep a mapping from block root to `BlockRef` in memory -
this has simplified reasoning about the dag, but is not sustainable with
the chain growing.
We can distinguish between two cases where by-root access is useful:
* unfinalized blocks - this is where the beacon chain is operating
generally, by validating incoming data as interesting for future fork
choice decisions - bounded by the length of the unfinalized period
* finalized blocks - historical access in the REST API etc - no bounds,
really
In this PR, we limit the by-root block index to the first use case:
finalized chain data can more efficiently be addressed by slot number.
Future work includes:
* limiting the `BlockRef` horizon in general - each instance is 40
bytes+overhead which adds up - this needs further refactoring to deal
with the tail vs state problem
* persisting the finalized slot-to-hash index - this one also keeps
growing unbounded (albeit slowly)
Anyway, this PR easily shaves ~128mb of memory usage at the time of
writing.
* No longer honor `BeaconBlocksByRoot` requests outside of the
non-finalized period - previously, Nimbus would generously return any
block through this libp2p request - per the spec, finalized blocks
should be fetched via `BeaconBlocksByRange` instead.
* return `Opt[BlockRef]` instead of `nil` when blocks can't be found -
this becomes a lot more common now and thus deserves more attention
* `dag.blocks` -> `dag.forkBlocks` - this index only carries unfinalized
blocks from now - `finalizedBlocks` covers the other `BlockRef`
instances
* in backfill, verify that the last backfilled block leads back to
genesis, or panic
* add backfill timings to log
* fix missing check that `BlockRef` block can be fetched with
`getForkedBlock` reliably
* shortcut doppelganger check when feature is not enabled
* in REST/JSON-RPC, fetch blocks without involving `BlockRef`
* fix dag.blocks ref
The new format is based on compressed CSV files in two channels:
* Detailed per-epoch data
* Aggregated "daily" summaries
The use of append-only CSV file speeds up significantly the epoch
processing speed during data generation. The use of compression
results in smaller storage requirements overall. The use of the
aggregated files has a very minor cost in both CPU and storage,
but leads to near interactive speed for report generation.
Other changes:
- Implemented support for graceful shut downs to avoid corrupting
the saved files.
- Fixed a memory leak caused by lacking `StateCache` clean up on each
iteration.
- Addressed review comments
- Moved the rewards and penalties calculation code in a separate module
Required invasive changes to existing modules:
- The `data` field of the `KeyedBlockRef` type is made public to be used
by the validator rewards monitor's Chain DAG update procedure.
- The `getForkedBlock` procedure from the `blockchain_dag.nim` module
is made public to be used by the validator rewards monitor's Chain DAG
update procedure.
This is an alternative take on https://github.com/status-im/nimbus-eth2/pull/3107
that aims for more minimal interventions in the spec modules at the expense of
duplicating more of the spec logic in ncli_db.
Time in the beacon chain is expressed relative to the genesis time -
this PR creates a `beacon_time` module that collects helpers and
utilities for dealing the time units - the new module does not deal with
actual wall time (that's remains in `beacon_clock`).
Collecting the time related stuff in one place makes it easier to find,
avoids some circular imports and allows more easily identifying the code
actually needs wall time to operate.
* move genesis-time-related functionality into `spec/beacon_time`
* avoid using `chronos.Duration` for time differences - it does not
support negative values (such as when something happens earlier than it
should)
* saturate conversions between `FAR_FUTURE_XXX`, so as to avoid
overflows
* fix delay reporting in validator client so it uses the expected
deadline of the slot, not "closest wall slot"
* simplify looping over the slots of an epoch
* `compute_start_slot_at_epoch` -> `start_slot`
* `compute_epoch_at_slot` -> `epoch`
A follow-up PR will (likely) introduce saturating arithmetic for the
time units - this is merely code moves, renames and fixing of small
bugs.
* Harden CommitteeIndex, SubnetId, SyncSubcommitteeIndex
Harden the use of `CommitteeIndex` et al to prevent future issues by
using a distinct type, then validating before use in several cases -
datatypes in spec are kept simple though so that invalid data still can
be read.
* fix invalid epoch used in REST
`/eth/v1/beacon/states/{state_id}/committees` committee length (could
return invalid data)
* normalize some variable names
* normalize committee index loops
* fix `RestAttesterDuty` to use `uint64` for `validator_committee_index`
* validate `CommitteeIndex` on ingress in REST API
* update rest rules with stricter parsing
* better REST serializers
* save lots of memory by not using `zip` ...at least a few bytes!
Overhaul of era files, including documentation and reference
implementations
* store blocks, then state, then slot indices for easy lookup at low
cost
* document era file rationale
* altair+ support in era writer
* support downloading blocks / states via JSON in addition to SSZ -
slow, but needed for infura support - SSZ is still used when server
supports it
* use common forked block/state reader in REST API
* fix stack overflows in REST JSON decoder
* fix invalid serialization of `justification_bits` in
`/eth/v1/debug/beacon/states` and `/eth/v2/debug/beacon/states`
* fix REST client to use `/eth/...` instead of `/api/eth/...`, update
"default" urls to expose REST api via `/eth` as well as this is what the
standard says - `/api` was added early on based on an example "base url"
in the spec that has been removed since
* expose Nimbus REST extensions via `/nimbus` in addition to
`/api/nimbus` to stay consistent with `/eth`
* fix invalid state root when reading states via REST
* fix recursive imports in `spec/ssz_codec`
* remove usages of `serialization.useCustomSerialization` - fickle
With checkpoint sync in particular, and state pruning in the future,
loading states or state-dependent data may fail. This PR adjusts the
code to allow this to be handled gracefully.
In particular, the new availability assumption is that states are always
available for the finalized checkpoint and newer, but may fail for
anything older.
The `tail` remains the point where state loading de-facto fails, meaning
that between the tail and the finalized checkpoint, we can still get
historical data (but code should be prepared to handle this as an
error).
However, to harden the code against long replays, several operations
which are assumed to work only with non-final data (such as gossip
verification and validator duties) now limit their search horizon to
post-finalized data.
* harden several state-dependent operations by logging an error instead
of introducing a panic when state loading fails
* `withState` -> `withUpdatedState` to differentiate from the other
`withState`
* `updateStateData` can now fail if no state is found in database - it
is also hardened against excessively long replays
* `getEpochRef` can now fail when replay fails
* reject blocks with invalid target root - they would be ignored
previously
* fix recursion bug in `isProposed`
Introduced in #3171, it turns out we can just follow the block headers
to achieve the same effect
* leaves the constant in the code so as to avoid confusion when reading
database that had the constant written (such as the fleet nodes and
other unstable users)
Validator monitoring based on and mostly compatible with the
implementation in Lighthouse - tracks additional logs and metrics for
specified validators so as to stay on top on performance.
The implementation works more or less the following way:
* Validator pubkeys are singled out for monitoring - these can be
running on the node or not
* For every action that the validator takes, we record steps in the
process such as messages being seen on the network or published in the
API
* When the dust settles at the end of an epoch, we report the
information from one epoch before that, which coincides with the
balances being updated - this is a tradeoff between being correct
(waiting for finalization) and providing relevant information in a
timely manner)
Renames and cleanups split out from the validator monitoring branch, so
as to reduce conflict area vs other PR:s
* add constants for expected message timing
* name validators after the messages they validate, mostly, to make
grepping easier
* unify field naming of EpochInfo across forks to make cross-fork code
easier
* ncli_db: add putState, putBlock
These tools allow modifying an existing nimbus database for the purpose
of recovery or reorg, moving the head, tail and genesis to arbitrary
points.
* remove potentially expensive `putState` in `BeaconStateDB`
* introduce `latest_block_root` which computes the root of the latest
applied block from the `latest_block_header` field (instead of passing
it in separately)
* avoid some unnecessary BeaconState copies during init
* discover https://github.com/nim-lang/Nim/issues/19094
* prefer `HashedBeaconState` in a few places to avoid recomputing state
root
* fetch latest block root from state when creating blocks
* harden `get_beacon_proposer_index` against invalid slots and document
* move random spec function tests to `test_spec.nim`
* avoid unnecessary state root computation before block proposal
* Support starting from altair
* hide `finalized-checkpoint-` - they are incomplete and usage may cause
crashes
* remove genesis detection code (broken, obsolete)
* enable starting ChainDAG from altair checkpoints - this is a
prerequisite for checkpoint sync (TODO: backfill)
* tighten checkpoint state conditions
* show error when starting from checkpoint with existing database (not
supported)
* print rest-compatible JSON in ncli/state_sim
* altair/merge support in ncli
* more altair/merge support in ncli_db
* pre-load header to speed up loading
* fix forked block decoding
* fix stack overflow crash in REST/debug/getStateV2
* introduce `ForkyXxx` for generic type matching of `Xxx` across
branches (SomeHashedBeaconState -> ForkyHashedBeaconState et al) -
`Some` is already used for other types of type classes
* consolidate function naming in BeaconChainDB, use some generics
* import `forks.nim` from other spec modules and move `Forked*` helpers
around to resolve circular imports
* remove `ForkedBeaconState`, use `ForkedHashedBeaconState` throughout
(less data shuffling between the types)
* fix several cases of states being stored on stack in tests, causing
random failures on some platforms
* remove reading json support from ncli - this should be ported to the
rest json reading instead (doesn't currently work because stack sizes)
Similar to the existing `RewardInfo`, this PR adds the infrastructure
needed to export epoch processing information from altair+. Because
accounting is done somewhat differently, the PR uses a fork-specific
object to extrct the information in order to make the cost on the spec
side low.
* RewardInfo -> EpochInfo, ForkedEpochInfo
* use array for computing new sync committee
* avoid repeated total active balance computations in block processing
* simplify proposer index check
* simplify epoch transition tests
* pre-compute base increment and reuse in epoch processing, and a few
other small optimizations
This PR introduces the type and does the heavy lifting in terms of
refactoring - the tools that use the accounting will need separate PR:s
(as well as refinements to the exportred information)
* reorganize ssz dependencies
This PR continues the work in
https://github.com/status-im/nimbus-eth2/pull/2646,
https://github.com/status-im/nimbus-eth2/pull/2779 as well as past
issues with serialization and type, to disentangle SSZ from eth2 and at
the same time simplify imports and exports with a structured approach.
The principal idea here is that when a library wants to introduce SSZ
support, they do so via 3 files:
* `ssz_codecs` which imports and reexports `codecs` - this covers the
basic byte conversions and ensures no overloads get lost
* `xxx_merkleization` imports and exports `merkleization` to specialize
and get access to `hash_tree_root` and friends
* `xxx_ssz_serialization` imports and exports `ssz_serialization` to
specialize ssz for a specific library
Those that need to interact with SSZ always import the `xxx_` versions
of the modules and never `ssz` itself so as to keep imports simple and
safe.
This is similar to how the REST / JSON-RPC serializers are structured in
that someone wanting to serialize spec types to REST-JSON will import
`eth2_rest_serialization` and nothing else.
* split up ssz into a core library that is independendent of eth2 types
* rename `bytes_reader` to `codec` to highlight that it contains coding
and decoding of bytes and native ssz types
* remove tricky List init overload that causes compile issues
* get rid of top-level ssz import
* reenable merkleization tests
* move some "standard" json serializers to spec
* remove `ValidatorIndex` serialization for now
* remove test_ssz_merkleization
* add tests for over/underlong byte sequences
* fix broken seq[byte] test - seq[byte] is not an SSZ type
There are a few things this PR doesn't solve:
* like #2646 this PR is weak on how to handle root and other
dontSerialize fields that "sometimes" should be computed - the same
problem appears in REST / JSON-RPC etc
* Fix a build problem on macOS
* Another way to fix the macOS builds
Co-authored-by: Zahary Karadjov <zahary@gmail.com>
The spec imports are a mess to work with, so this branch cleans them up
a bit to ensure that we avoid generic sandwitches and that importing
stuff generally becomes easier.
* reexport crypto/digest/presets because these are part of the public
symbol set of the rest of the spec types
* don't export `merge` types from `base` - this causes circular deps
* fix circular deps in `ssz/spec_types` - this is the first step in
disentangling ssz from spec
* be explicit about phase0 vs altair - longer term, `altair` will become
the "natural" type set, then merge and so on, so no point in giving
`phase0` special preferential treatment
Simpler module name for stuff that covers forks
* check that runtime config matches database state
* also include some assorted altair cleanups
* use "standard" genesis fork in local testnet to work around missing
runtime config support
* Implement split preset/config support
This is the initial bulk refactor to introduce runtime config values in
a number of places, somewhat replacing the existing mechanism of loading
network metadata.
It still needs more work, this is the initial refactor that introduces
runtime configuration in some of the places that need it.
The PR changes the way presets and constants work, to match the spec. In
particular, a "preset" now refers to the compile-time configuration
while a "cfg" or "RuntimeConfig" is the dynamic part.
A single binary can support either mainnet or minimal, but not both.
Support for other presets has been removed completely (can be readded,
in case there's need).
There's a number of outstanding tasks:
* `SECONDS_PER_SLOT` still needs fixing
* loading custom runtime configs needs redoing
* checking constants against YAML file
* yeerongpilly support
`build/nimbus_beacon_node --network=yeerongpilly --discv5:no --log-level=DEBUG`
* load fork epoch from config
* fix fork digest sent in status
* nicer error string for request failures
* fix tools
* one more
* fixup
* fixup
* fixup
* use "standard" network definition folder in local testnet
Files are loaded from their standard locations, including genesis etc,
to conform to the format used in the `eth2-networks` repo.
* fix launch scripts, allow unknown config values
* fix base config of rest test
* cleanups
* bundle mainnet config using common loader
* fix spec links and names
* only include supported preset in binary
* drop yeerongpilly, add altair-devnet-0, support boot_enr.yaml
* use ForkedHashedBeaconState in StateData
* fix FAR_FUTURE_EPOCH -> slot overflow; almost always use assign()
* avoid stack allocation in maybeUpgradeStateToAltair()
* create and use dispatch functions for check_attester_slashing(), check_proposer_slashing(), and check_voluntary_exit()
* use getStateRoot() instead of various state.data.hbsPhase0.root
* remove withStateVars.hashedState(), which doesn't work as a design anymore
* introduce spec/datatypes/altair into beacon_chain_db
* fix inefficient codegen for getStateField(largeStateField)
* state_transition_slots() doesn't either need/use blocks or runtime presets
* combine process_slots(HBS)/state_transition_slots(HBS) which differ only in last-slot htr optimization
* getStateField(StateData, ...) was replaced by getStateField(ForkedHashedBeaconState, ...)
* fix rollback
* switch some state_transition(), process_slots, makeTestBlocks(), etc to use ForkedHashedBeaconState
* remove state_transition(phase0.HashedBeaconState)
* remove process_slots(phase0.HashedBeaconState)
* remove state_transition_block(phase0.HashedBeaconState)
* remove unused callWithBS(); separate case expression from if statement
* switch back from nested-ref-object construction to (ref Foo)(Bar())
* use StateData in place of BeaconState outside state transition code
* propagate more StateData usage
* remove withStateVars().state
* wrap get_beacon_committee(BeaconState, ...) as gbc(StateData, ...)
* switch makeAttestation() to use StateData
* use StateData wrapper/dispatcher for get_committee_count_per_slot()
* convert AttestationCache.init(), weak subjectivity functions, and updateValidatorMetrics()
* add get_shuffled_active_validator_indices(StateData) and get_block_root_at_slot(StateData)
* switch makeAttestationData() to StateData
* sync AllTests-mainnet.md after rebase
* Revert "Revert "Upgrade database schema" (#2570)"
This reverts commit 6057c2ffb4.
* ssz: fix loading empty lists into existing instances
Not a problem earlier because we didn't reuse instances
* bump nim-eth
* bump nim-web3
The `kvstore` design we're using now turns out to not be the best way to
use `sqlite` - in particular, there are some significant benefits to
using rowid in certain situations and to keep data in separate tables.
With this branch, there are massive improvements in startup time
(seconds instead of minutes) and state/block storage and pruning times
(milliseconds instead of seconds) - these improvements can in particular
be seen on slow drives and translate directly into better attestation
performance.
* update kvstore to new keyspace design
* remove `DirStoreRef` and the hidden `--state-db-kind` option - this
was an experiment to store large blobs in files, but with the new
kvstore, there's no compelling reason to do so
* remove `DbMap` - unused and would need updating for new keyspace
design
* introduce separate tables for each data type (blocks, states etc)
* remove "WITHOUT ROWID" pessimization for tables with large blobs
* close DbSeq statements explicitly (and earlier)
* store beacon block summaries in separate table, without SSZ
compression and load them all with single query on startup
* stop storing backwards compat full states
* mark genesis beacon block as trusted
* avoid faststreams when loading SSZ data
* remove `DisagreementBehavior` (unused)
Jacek Sieka
zah
tersec