* Revert "Revert "Upgrade database schema" (#2570)"
This reverts commit 6057c2ffb4.
* ssz: fix loading empty lists into existing instances
Not a problem earlier because we didn't reuse instances
* bump nim-eth
* bump nim-web3
The `kvstore` design we're using now turns out to not be the best way to
use `sqlite` - in particular, there are some significant benefits to
using rowid in certain situations and to keep data in separate tables.
With this branch, there are massive improvements in startup time
(seconds instead of minutes) and state/block storage and pruning times
(milliseconds instead of seconds) - these improvements can in particular
be seen on slow drives and translate directly into better attestation
performance.
* update kvstore to new keyspace design
* remove `DirStoreRef` and the hidden `--state-db-kind` option - this
was an experiment to store large blobs in files, but with the new
kvstore, there's no compelling reason to do so
* remove `DbMap` - unused and would need updating for new keyspace
design
* introduce separate tables for each data type (blocks, states etc)
* remove "WITHOUT ROWID" pessimization for tables with large blobs
* close DbSeq statements explicitly (and earlier)
* store beacon block summaries in separate table, without SSZ
compression and load them all with single query on startup
* stop storing backwards compat full states
* mark genesis beacon block as trusted
* avoid faststreams when loading SSZ data
* remove `DisagreementBehavior` (unused)
Currently, we have a bit of a convoluted flow where when sending
attestations, we start broadcasting them over gossip then pass them to
the attestation validation to include them in the local attestation pool
- it should be the other way around: we should be checking attestations
_before_ gossipping them - this serves as an additional safety net to
ensure that we don't publish junk - this becomes more important when
publishing attestations from the API.
Also, the REST API was performing its own validation meaning
attestations coming from REST would be validated twice - finally, the
JSON RPC wasn't pre-validating and would happily broadcast invalid
attestations.
* Unified attestation production pipeline with the same flow for gossip,
locally and API-produced attestations: all are now validated and entered
into the pool, then broadcast/republished
* Refactor subnet handling with specific SubnetId alias, streamlining
where subnets are computed, avoiding the need to pass around the number
of active validators
* Move some of the subnet handling code to eth2_network
* Use BitArray throughout for subnet handling
* Introduce unittest2 and junit reports
* fix XML path
* don't combine multiple CI runs
* fixup
* public combined report also
Co-authored-by: Ștefan Talpalaru <stefantalpalaru@yahoo.com>
With the introduction of batching and lazy attestation aggregation, it
no longer makes sense to enqueue attestations between the signature
check and adding them to the attestation pool - this only takes up
valuable CPU without any real benefit.
* add successfully validated attestations to attestion pool directly
* avoid copying participant list around for single-vote attestations,
pass single validator index instead
* release decompressed gossip memory earlier, specially during async
message validation
* use cooked signatures in a few more places to avoid reloads and errors
* remove some Defect-raising versions of signature-loading
* release decompressed data memory before validating message
This is a revamp of the attestation pool that cleans up several aspects
of attestation processing as the network grows larger and block space
becomes more precious.
The aim is to better exploit the divide between attestation subnets and
aggregations by keeping the two kinds separate until it's time to either
produce a block or aggregate. This means we're no longer eagerly
combining single-vote attestations, but rather wait until the last
moment, and then try to add singles to all aggregates, including those
coming from the network.
Importantly, the branch improves on poor aggregate quality and poor
attestation packing in cases where block space is running out.
A basic greed scoring mechanism is used to select attestations for
blocks - attestations are added based on how much many new votes they
bring to the table.
* Collect single-vote attestations separately and store these until it's
time to make aggregates
* Create aggregates based on single-vote attestations
* Select _best_ aggregate rather than _first_ aggregate when on
aggregation duty
* Top up all aggregates with singles when it's time make the attestation
cut, thus improving the chances of grabbing the best aggregates out
there
* Improve aggregation test coverage
* Improve bitseq operations
* Simplify aggregate signature creation
* Make attestation cache temporary instead of storing it in attestation
pool - most of the time, blocks are not being produced, no need to keep
the data around
* Remove redundant aggregate storage that was used only for RPC
* Use tables to avoid some linear seeks when looking up attestation data
* Fix long cleanup on large slot jumps
* Avoid some pointers
* Speed up iterating all attestations for a slot (fixes#2490)
* Reset cached indices when resetting cache on SSZ read
When deserializing into an existing structure, the cache should be
cleared - goes for json also. Also improve error messages.
* update some v1.1.0 alpha1 to alpha2
* remove unused getDepositMessage overload and move other out of datatypes/base
* bump nim-eth2-scenarios to download v1.1.0-alpha.2 test vectors
* construct object rather than result
* initial immutable validator database factoring
* remove changes from chain_dag: this abstraction properly belongs in beacon_chain_db
* add merging mutable/immutable validator portions; individually test database roundtripping of immutable validators and states-sans-immutable-validators
* update test summaries
* use stew/assign2 instead of Nim assignment
* add reading/writing of immutable validators in chaindag
* remove unused import
* replace chunked k/v store of immutable validators with per-row SQL table storage
* use List instead of HashList
* un-stub some ncli_db code so that it uses
* switch HashArray to array; move BeaconStateNoImmutableValidators from datatypes to beacon_chain_db
* begin only-mutable-part state storage
* uncomment some assigns
* work around https://github.com/nim-lang/Nim/issues/17253
* fix most of the issues/oversights; local sim runs again
* fix test suite by adding missing beaconstate field to copy function
* have ncli bench also store immutable validators
* extract some immutable-validator-specific code from the beacon chain db module
* add more rigorous database state roundtripping, with changing validator sets
* adjust ncli_db to use new schema
* simplify putState/getState by moving all immutable validator accounting into beacon state DB
* remove redundant test case and move code to immutable-beacon-chain module
* more efficient, but still brute-force, mutable+immutable validator merging
* reuse BeaconState in getState
* ensure HashList/HashArray caches are cleared when reusing getState buffers; add ncli_db and a unit test to verify this
* HashList.clear() -> HashList.clearCache()
* only copy incrementally necessary immutable validators
* increase strictness of test cases and fix/work around resulting HashList cache invalidation issues
* remove explanatory scaffolding
* allow for storage of full (with all validators) states for backwards/forwards-compatibility
* adjust DbSeq type usage
* store full, with-validators, state every 64 epochs to enable reverting versions
* reduce memory allocation and intermediate objects in state storage codepath
* eliminate allocation/copying through intermediate BeaconStateNoImmutableValidators objects
* skip benchmarking initial genesis-validator-heavy state store
* always store new-style state and sometimes old-style state
* document intent behind BeaconState/Validator type-punnery
* more accurate failure message on SQLite in-memory database initialization failure
* Create CLI tool for slashing export
* Use SQLite as a DB instead of a KV-store
* Keeps v1 and v2 DBs around
* Uses the same schema as Lighthouse v1.1.0
* Passes all interchange tests + skeleton of finalization pruning
* Removes tests that would violate v5 / minimal slashing DB and MinSlot rules
* Migration tool added using low-watermark scheme for faster migration of large number of validators
* detect already-aggregate-voted condition before attestation pool; add is_aggregator tests
* replace pair of attestation-per-epoch tracking lists with single list and remove Option use
* fix attestation condition
* use safer type conversions; add more is_aggregator tests
* update ve1.0.0-rc.0 preset spec references
* remove runtime preset ETH1_FOLLOW_DISTANCE from preset files; remove two CI build items to try to keep Travis from timing out
* in exit pool, filter out already-packaged messages; bundle remaining messages into beaconblocks
* filter messages at block construction time
* allow adding up to intended capacity of buffers, beyond per-block limits
* document rationale/design for filtering mechanism
about 40% better slot processing times (with LTO enabled) - these don't
do BLS but are used
heavily during replay (state transition = slot + block transition)
tests using a recent medalla state and advancing it 1000 slots:
```
./ncli slots --preState2:state-302271-3c1dbf19-c1f944bf.ssz --slot:1000
--postState2:xx.ssz
```
pre:
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
39.236, 0.000, 39.236, 39.236, 1,
Load state from file
0.049, 0.002, 0.046, 0.063, 968,
Apply slot
256.504, 81.008, 213.471, 591.902, 32,
Apply epoch slot
28.597, 0.000, 28.597, 28.597, 1,
Save state to file
```
cast:
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
37.079, 0.000, 37.079, 37.079, 1,
Load state from file
0.042, 0.002, 0.040, 0.090, 968,
Apply slot
215.552, 68.763, 180.155, 500.103, 32,
Apply epoch slot
25.106, 0.000, 25.106, 25.106, 1,
Save state to file
```
cast+rewards:
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
40.049, 0.000, 40.049, 40.049, 1,
Load state from file
0.048, 0.001, 0.045, 0.060, 968,
Apply slot
164.981, 76.273, 142.099, 477.868, 32,
Apply epoch slot
28.498, 0.000, 28.498, 28.498, 1,
Save state to file
```
cast+rewards+shr
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
12.898, 0.000, 12.898, 12.898, 1,
Load state from file
0.039, 0.002, 0.038, 0.054, 968,
Apply slot
139.971, 68.797, 120.088, 428.844, 32,
Apply epoch slot
24.761, 0.000, 24.761, 24.761, 1,
Save state to file
```
This implements disparity, resolving a part of
https://github.com/status-im/nim-beacon-chain/issues/1367
* make BeaconTime a duration for fractional seconds
* factor out attestation/aggregate validation
* simplify recording of queued attestations
* simplify attestation signature check
* fix blocks_received metric
* add some trivial validation tests
* remove unresolved attestation table - attestations for unknown blocks
are dropped instead (cannot verify their signature)
* collect all epochrefs in specific blocks to make them easier to find
and to avoid lots of small seqs
* reuse validator key databases more aggressively by comparing keys
* make state cache available from within `withState`
* make epochRef available from within onBlockAdded callback
* integrate getEpochInfo into block resolution and epoch ref logic such
that epochrefs are created when blocks are added to pool or lazily when
needed by a getEpochRef
* fill state cache better from EpochRef, speeding up replay and
validation
* store epochRef in specific blocks to make them easier to find and
reuse
* fix database corruption when state is saved while replaying quarantine
* replay slots fully from block pool before processing state
* compare bls values more smartly
* store epoch state without block applied in database - it's recommended
to resync the node!
this branch will drastically speed up processing in times of long
non-finality, as well as cut memory usage by 10x during the recent
medalla madness.
* removed the BlockPool type and all of the proxy functions around it - passing the chain DAG and the quarantine explicitly where appropriately - they don't need to be bundled in a type
* fixed the build after the rebase
This also assigns precise types to the constants in the minimal
and mainnet presets in order to reduce the chance of compilation
errors when custom presets are used (previously, only the custom
presets have precisely assigned types for the constants).
* update most of the remaining non-fork-choice spec refs, updating code where necessary
* revert presumably harmless compute_signing_root() change, but this way, keep things really unchanged outside inspector
* Dual headed fork choice
* fix finalizedEpoch not moving
* reduce fork choice verbosity
* Add failing tests due to pruning
* Properly handle duplicate blocks in sync
* test_block_pool also add a test for duplicate blocks
* comments addressing review
* Fix fork choice v2, was missing integrating block proposed
* remove a spurious debug writeStackTrace
* update block_sim
* Use OrderedTable to ensure that we always load parents before children in fork choice
* Load the DAG data in fork choice at init if there is some (can sync witti)
* Cluster of quarantined blocks were not properly added to the fork choice
* Workaround async gcsafe warnings
* Update blockpoool tests
* Do the callback before clearing the quarantine
* Revert OrderedTable, implement topological sort of DAG, allow forkChoice to be initialized from arbitrary finalized heads
* Make it work with latest devel - Altona readyness
* Add a recovery mechanism when forkchoice desyncs with blockpool
* add the current problematic node to the stack
* Fix rebase indentation bug (but still producing invalid block)
* Fix cache at epoch boundaries and lateBlock addition
* add tests for unviable blocks
also enable finalization tests in all test configs - they're plenty fast
now
also fix newClone for non-rvo cases. sigh.
* fixes
* reorder ssz
* split into hash_trees and ssz_serialization, roughly, for hashing and
IO
* move bitseqs into ssz (from stew)
* clean up imports
* docs, imports
* wip: cache
* cache lists and arrays of complex objects (5x block processing speed
on ncli_db)
trivial baseline cache that stores tree in flat memory structure
* support array of uint64
* work around type issues
* more type compiler bug workarounds
* cache balances, more type fixes
* index type
* ncli_db: add validation flag, better ux
* int64 fixes
* test fix
* "oops"
```
647.913, 0.000, 647.913, 647.913, 1,
Initialize DB
0.540, 0.402, 0.340, 9.451, 619,
Load block from database
40.268, 0.000, 40.268, 40.268, 1,
Load state from database
0.498, 0.150, 0.343, 0.930, 596,
Apply block
3.548, 11.005, 0.729, 54.022, 23,
Apply epoch block
```
* support all basic types
* cleanups
* a few more cleanups
* update more spec refs in beacon_chain/spec/presets; skip skipped constant sanity checks also from markdown reports' perspectives
* mark skipped as skipped in markdown
* initial fork-choice refactor
* Add fork_choice test for "no votes"
* Initial test with voting: fix handling of unknown validators and parent blocks
* Fix tiebreak of votes
* Cleanup debugging traces
* Complexify the vote test
* fakeHash use the bigEndian repr of number + fix tiebreak for good
* Stash changes: found critical bug in nimcrypto `==` and var openarray
* Passing fork choice tests with varying votes
* Add FFG fork choice scenario + fork choice to the test suite
* Not sure why lmdb / rocksdb reappeared in rebase
* Add sanity checks to .nimble file + integrate fork choice tests to the test DB and test timing
* Cleanup debugging echos
* nimcrypto fix https://github.com/status-im/nim-beacon-chain/pull/864 as been merged, remove TODO comment
* Turn fork choice exception-free
* Cleanup "result" to ensure early return is properly used
* Add a comment on private/public error code vs Result
* result -> results following https://github.com/status-im/nim-beacon-chain/pull/866
* Address comments:
- raises: [Defect] doesn't work -> TODO
- process_attestation cannot fail
- try/except as expression pending Nim v1.2.0
- cleanup TODOs
* re-enable all sanity checks
* tag no raise for process_attestation
* use raises defect everywhere in fork choice and fix process_attestation test
* initial 0.11.1 spec commit; no test regressions and finalizes in eth2_network_simulation
* with BLS 0.10/0.11 available, stop skipping attester slashing, proposer slashing, and voluntary exist operations fixture tests
* switch param orders to group state.{fork, genesis_validators_root}; bump spec/datatypes spec version for network purposes
* mark attestation construction and broadcast and some minimal/mainnet constants as 0.11.1-compatible; remove phase 1 sharding constants from minimal which don't exist in that preset
Dustin Brody
Jacek Sieka
Mamy Ratsimbazafy
Zahary Karadjov
Ștefan Talpalaru
Viktor Kirilov
Zed