This PR makes the necessary adjustments to deal with the revamped snappy
API.
In practical terms for nimbus-eth2, there are performance increases to
gossip processing, database reading and writing as well as era file
processing. Exporting `.era` files for example, a snappy-heavy
operation, almost halves in total processing time:
Pre:
```
Average, StdDev, Min, Max, Samples, Test
39.088, 8.735, 23.619, 53.301, 50, tState
237.079, 46.692, 165.620, 355.481, 49, tBlocks
```
Post:
```
All time are ms
Average, StdDev, Min, Max, Samples, Test
25.350, 5.303, 15.351, 41.856, 50, tState
141.238, 24.164, 99.990, 199.329, 49, tBlocks
```
Some upstream repos still need fixes, but this gets us close enough that
style hints can be enabled by default.
In general, "canonical" spellings are preferred even if they violate
nep-1 - this applies in particular to spec-related stuff like
`genesis_validators_root` which appears throughout the codebase.
`.era` files and Req/Resp protocols use framed formats - aligning the
database with these makes for less recompression work overall as gossip
is sent only once while req/resp repeats (potentially) - this also
allows efficient pruning-to-era where snappy-recompression is the major
cycle thief.
* harden validator API against pre-finalized slot requests
* check `syncHorizon` when responding to validator api requests too far
from `head`
* limit state-id based requests to one epoch ahead of `head`
* put historic data bounds on block/attestation/etc validator production API, preventing them from being used with already-finalized slots
* add validator block smoke tests
* make rest test create a new genesis with the tests running roughly in
the first epoch to allow testing a few more boundary conditions
* era: load blocks and states
Era files contain finalized history and can be thought of as an
alternative source for block and state data that allows clients to avoid
syncing this information from the P2P network - the P2P network is then
used to "top up" the client with the most recent data. They can be
freely shared in the community via whatever means (http, torrent, etc)
and serve as a permanent cold store of consensus data (and, after the
merge, execution data) for history buffs and bean counters alike.
This PR gently introduces support for loading blocks and states in two
cases: block requests from rest/p2p and frontfilling when doing
checkpoint sync.
The era files are used as a secondary source if the information is not
found in the database - compared to the database, there are a few key
differences:
* the database stores the block indexed by block root while the era file
indexes by slot - the former is used only in rest, while the latter is
used both by p2p and rest.
* when loading blocks from era files, the root is no longer trivially
available - if it is needed, it must either be computed (slow) or cached
(messy) - the good news is that for p2p requests, it is not needed
* in era files, "framed" snappy encoding is used while in the database
we store unframed snappy - for p2p2 requests, the latter requires
recompression while the former could avoid it
* front-filling is the process of using era files to replace backfilling
- in theory this front-filling could happen from any block and
front-fills with gaps could also be entertained, but our backfilling
algorithm cannot take advantage of this because there's no (simple) way
to tell it to "skip" a range.
* front-filling, as implemented, is a bit slow (10s to load mainnet): we
load the full BeaconState for every era to grab the roots of the blocks
- it would be better to partially load the state - as such, it would
also be good to be able to partially decompress snappy blobs
* lookups from REST via root are served by first looking up a block
summary in the database, then using the slot to load the block data from
the era file - however, there needs to be an option to create the
summary table from era files to fully support historical queries
To test this, `ncli_db` has an era file exporter: the files it creates
should be placed in an `era` folder next to `db` in the data directory.
What's interesting in particular about this setup is that `db` remains
as the source of truth for security purposes - it stores the latest
synced head root which in turn determines where a node "starts" its
consensus participation - the era directory however can be freely shared
between nodes / people without any (significant) security implications,
assuming the era files are consistent / not broken.
There's lots of future improvements to be had:
* we can drop the in-memory `BlockRef` index almost entirely - at this
point, resident memory usage of Nimbus should drop to a cool 500-600 mb
* we could serve era files via REST trivially: this would drop backfill
times to whatever time it takes to download the files - unlike the
current implementation that downloads block by block, downloading an era
at a time almost entirely cuts out request overhead
* we can "reasonably" recreate detailed state history from almost any
point in time, turning an O(slot) process into O(1) effectively - we'll
still need caches and indices to do this with sufficient efficiency for
the rest api, but at least it cuts the whole process down to minutes
instead of hours, for arbitrary points in time
* CI: ignore failures with Nim-1.6 (temporary)
* test fixes
Co-authored-by: Ștefan Talpalaru <stefantalpalaru@yahoo.com>
Up til now, the block dag has been using `BlockRef`, a structure adapted
for a full DAG, to represent all of chain history. This is a correct and
simple design, but does not exploit the linearity of the chain once
parts of it finalize.
By pruning the in-memory `BlockRef` structure at finalization, we save,
at the time of writing, a cool ~250mb (or 25%:ish) chunk of memory
landing us at a steady state of ~750mb normal memory usage for a
validating node.
Above all though, we prevent memory usage from growing proportionally
with the length of the chain, something that would not be sustainable
over time - instead, the steady state memory usage is roughly
determined by the validator set size which grows much more slowly. With
these changes, the core should remain sustainable memory-wise post-merge
all the way to withdrawals (when the validator set is expected to grow).
In-memory indices are still used for the "hot" unfinalized portion of
the chain - this ensure that consensus performance remains unchanged.
What changes is that for historical access, we use a db-based linear
slot index which is cache-and-disk-friendly, keeping the cost for
accessing historical data at a similar level as before, achieving the
savings at no percievable cost to functionality or performance.
A nice collateral benefit is the almost-instant startup since we no
longer load any large indicies at dag init.
The cost of this functionality instead can be found in the complexity of
having to deal with two ways of traversing the chain - by `BlockRef` and
by slot.
* use `BlockId` instead of `BlockRef` where finalized / historical data
may be required
* simplify clearance pre-advancement
* remove dag.finalizedBlocks (~50:ish mb)
* remove `getBlockAtSlot` - use `getBlockIdAtSlot` instead
* `parent` and `atSlot` for `BlockId` now require a `ChainDAGRef`
instance, unlike `BlockRef` traversal
* prune `BlockRef` parents on finality (~200:ish mb)
* speed up ChainDAG init by not loading finalized history index
* mess up light client server error handling - this need revisiting :)
One more step on the journey to reduce `BlockRef` usage across the
codebase - this one gets rid of `StateData` whose job was to keep track
of which block was last assigned to a state - these duties have now been
taken over by `latest_block_root`, a fairly recent addition that
computes this block root from state data (at a small cost that should be
insignificant)
99% mechanical change.
To calculate the deltas correctly, the `process_inactivity_updates` function
must be called before the rewards and penalties processing code in order to
update the `inactivity_scores` field in the state. This would have required
duplicating more logic from the spec in the ncli modules, so I've decided to
pay the price of introducing a run-time copy of the state at each epoch which
eliminates the need to duplicate logic (both for this fix and the previous one).
Other changes:
* Fixes for the read-only mode of the `BeaconChainDb`
* Fix an uint64 underflow in the debug output procedure for printing
balance deltas
* Allow Bellatrix states in the reward computation helpers
Streamline lookup with Forky and BeaconBlockFork (then we can do the
same for era)
We use type to avoid conditionals, as fork is often already known at a
"higher" level.
* load blockid before loading block by root - this is needed to map root
to slot and will eventually be done via block summary table for "old"
blocks
Co-authored-by: tersec <tersec@users.noreply.github.com>
Update several `ncli_db` commands to run in readOnly mode, allowing them
to be used with a running instance - in particular era export.
* export all eras by default
* skip already-exported eras
Notable improvements:
* A separate aggregation pass is no longer required.
* The user can opt to produce only aggregated data
(resuing in a much smaller data set).
* Large portion of the number cruching in Jupyter is now done in C
through the rich DataFrames API.
* Added support for comparisons against the "median" validator
performance in the network.
* limit by-root requests to non-finalized blocks
Presently, we keep a mapping from block root to `BlockRef` in memory -
this has simplified reasoning about the dag, but is not sustainable with
the chain growing.
We can distinguish between two cases where by-root access is useful:
* unfinalized blocks - this is where the beacon chain is operating
generally, by validating incoming data as interesting for future fork
choice decisions - bounded by the length of the unfinalized period
* finalized blocks - historical access in the REST API etc - no bounds,
really
In this PR, we limit the by-root block index to the first use case:
finalized chain data can more efficiently be addressed by slot number.
Future work includes:
* limiting the `BlockRef` horizon in general - each instance is 40
bytes+overhead which adds up - this needs further refactoring to deal
with the tail vs state problem
* persisting the finalized slot-to-hash index - this one also keeps
growing unbounded (albeit slowly)
Anyway, this PR easily shaves ~128mb of memory usage at the time of
writing.
* No longer honor `BeaconBlocksByRoot` requests outside of the
non-finalized period - previously, Nimbus would generously return any
block through this libp2p request - per the spec, finalized blocks
should be fetched via `BeaconBlocksByRange` instead.
* return `Opt[BlockRef]` instead of `nil` when blocks can't be found -
this becomes a lot more common now and thus deserves more attention
* `dag.blocks` -> `dag.forkBlocks` - this index only carries unfinalized
blocks from now - `finalizedBlocks` covers the other `BlockRef`
instances
* in backfill, verify that the last backfilled block leads back to
genesis, or panic
* add backfill timings to log
* fix missing check that `BlockRef` block can be fetched with
`getForkedBlock` reliably
* shortcut doppelganger check when feature is not enabled
* in REST/JSON-RPC, fetch blocks without involving `BlockRef`
* fix dag.blocks ref
The new format is based on compressed CSV files in two channels:
* Detailed per-epoch data
* Aggregated "daily" summaries
The use of append-only CSV file speeds up significantly the epoch
processing speed during data generation. The use of compression
results in smaller storage requirements overall. The use of the
aggregated files has a very minor cost in both CPU and storage,
but leads to near interactive speed for report generation.
Other changes:
- Implemented support for graceful shut downs to avoid corrupting
the saved files.
- Fixed a memory leak caused by lacking `StateCache` clean up on each
iteration.
- Addressed review comments
- Moved the rewards and penalties calculation code in a separate module
Required invasive changes to existing modules:
- The `data` field of the `KeyedBlockRef` type is made public to be used
by the validator rewards monitor's Chain DAG update procedure.
- The `getForkedBlock` procedure from the `blockchain_dag.nim` module
is made public to be used by the validator rewards monitor's Chain DAG
update procedure.
This is an alternative take on https://github.com/status-im/nimbus-eth2/pull/3107
that aims for more minimal interventions in the spec modules at the expense of
duplicating more of the spec logic in ncli_db.
Time in the beacon chain is expressed relative to the genesis time -
this PR creates a `beacon_time` module that collects helpers and
utilities for dealing the time units - the new module does not deal with
actual wall time (that's remains in `beacon_clock`).
Collecting the time related stuff in one place makes it easier to find,
avoids some circular imports and allows more easily identifying the code
actually needs wall time to operate.
* move genesis-time-related functionality into `spec/beacon_time`
* avoid using `chronos.Duration` for time differences - it does not
support negative values (such as when something happens earlier than it
should)
* saturate conversions between `FAR_FUTURE_XXX`, so as to avoid
overflows
* fix delay reporting in validator client so it uses the expected
deadline of the slot, not "closest wall slot"
* simplify looping over the slots of an epoch
* `compute_start_slot_at_epoch` -> `start_slot`
* `compute_epoch_at_slot` -> `epoch`
A follow-up PR will (likely) introduce saturating arithmetic for the
time units - this is merely code moves, renames and fixing of small
bugs.
* Harden CommitteeIndex, SubnetId, SyncSubcommitteeIndex
Harden the use of `CommitteeIndex` et al to prevent future issues by
using a distinct type, then validating before use in several cases -
datatypes in spec are kept simple though so that invalid data still can
be read.
* fix invalid epoch used in REST
`/eth/v1/beacon/states/{state_id}/committees` committee length (could
return invalid data)
* normalize some variable names
* normalize committee index loops
* fix `RestAttesterDuty` to use `uint64` for `validator_committee_index`
* validate `CommitteeIndex` on ingress in REST API
* update rest rules with stricter parsing
* better REST serializers
* save lots of memory by not using `zip` ...at least a few bytes!
* REST cleanups
* reject out-of-range committee requests
* print all hex values as lower-case
* allow requesting state information by head state root
* turn `DomainType` into array (follow spec)
* `uint_to_bytesXX` -> `uint_to_bytes` (follow spec)
* fix wrong dependent root in `/eth/v1/validator/duties/proposer/`
* update documentation - `--subscribe-all-subnets` is no longer needed
when using the REST interface with validator clients
* more fixes
* common helpers for dependent block
* remove test rules obsoleted by more strict epoch tests
* fix trailing commas
* Update docs/the_nimbus_book/src/rest-api.md
* Update docs/the_nimbus_book/src/rest-api.md
Co-authored-by: sacha <sacha@status.im>
Overhaul of era files, including documentation and reference
implementations
* store blocks, then state, then slot indices for easy lookup at low
cost
* document era file rationale
* altair+ support in era writer
* support downloading blocks / states via JSON in addition to SSZ -
slow, but needed for infura support - SSZ is still used when server
supports it
* use common forked block/state reader in REST API
* fix stack overflows in REST JSON decoder
* fix invalid serialization of `justification_bits` in
`/eth/v1/debug/beacon/states` and `/eth/v2/debug/beacon/states`
* fix REST client to use `/eth/...` instead of `/api/eth/...`, update
"default" urls to expose REST api via `/eth` as well as this is what the
standard says - `/api` was added early on based on an example "base url"
in the spec that has been removed since
* expose Nimbus REST extensions via `/nimbus` in addition to
`/api/nimbus` to stay consistent with `/eth`
* fix invalid state root when reading states via REST
* fix recursive imports in `spec/ssz_codec`
* remove usages of `serialization.useCustomSerialization` - fickle
With checkpoint sync in particular, and state pruning in the future,
loading states or state-dependent data may fail. This PR adjusts the
code to allow this to be handled gracefully.
In particular, the new availability assumption is that states are always
available for the finalized checkpoint and newer, but may fail for
anything older.
The `tail` remains the point where state loading de-facto fails, meaning
that between the tail and the finalized checkpoint, we can still get
historical data (but code should be prepared to handle this as an
error).
However, to harden the code against long replays, several operations
which are assumed to work only with non-final data (such as gossip
verification and validator duties) now limit their search horizon to
post-finalized data.
* harden several state-dependent operations by logging an error instead
of introducing a panic when state loading fails
* `withState` -> `withUpdatedState` to differentiate from the other
`withState`
* `updateStateData` can now fail if no state is found in database - it
is also hardened against excessively long replays
* `getEpochRef` can now fail when replay fails
* reject blocks with invalid target root - they would be ignored
previously
* fix recursion bug in `isProposed`
Introduced in #3171, it turns out we can just follow the block headers
to achieve the same effect
* leaves the constant in the code so as to avoid confusion when reading
database that had the constant written (such as the fleet nodes and
other unstable users)
Validator monitoring based on and mostly compatible with the
implementation in Lighthouse - tracks additional logs and metrics for
specified validators so as to stay on top on performance.
The implementation works more or less the following way:
* Validator pubkeys are singled out for monitoring - these can be
running on the node or not
* For every action that the validator takes, we record steps in the
process such as messages being seen on the network or published in the
API
* When the dust settles at the end of an epoch, we report the
information from one epoch before that, which coincides with the
balances being updated - this is a tradeoff between being correct
(waiting for finalization) and providing relevant information in a
timely manner)
Renames and cleanups split out from the validator monitoring branch, so
as to reduce conflict area vs other PR:s
* add constants for expected message timing
* name validators after the messages they validate, mostly, to make
grepping easier
* unify field naming of EpochInfo across forks to make cross-fork code
easier
* ncli_db: add putState, putBlock
These tools allow modifying an existing nimbus database for the purpose
of recovery or reorg, moving the head, tail and genesis to arbitrary
points.
* remove potentially expensive `putState` in `BeaconStateDB`
* introduce `latest_block_root` which computes the root of the latest
applied block from the `latest_block_header` field (instead of passing
it in separately)
* avoid some unnecessary BeaconState copies during init
* discover https://github.com/nim-lang/Nim/issues/19094
* prefer `HashedBeaconState` in a few places to avoid recomputing state
root
* fetch latest block root from state when creating blocks
* harden `get_beacon_proposer_index` against invalid slots and document
* move random spec function tests to `test_spec.nim`
* avoid unnecessary state root computation before block proposal
* Support starting from altair
* hide `finalized-checkpoint-` - they are incomplete and usage may cause
crashes
* remove genesis detection code (broken, obsolete)
* enable starting ChainDAG from altair checkpoints - this is a
prerequisite for checkpoint sync (TODO: backfill)
* tighten checkpoint state conditions
* show error when starting from checkpoint with existing database (not
supported)
* print rest-compatible JSON in ncli/state_sim
* altair/merge support in ncli
* more altair/merge support in ncli_db
* pre-load header to speed up loading
* fix forked block decoding
* fix stack overflow crash in REST/debug/getStateV2
* introduce `ForkyXxx` for generic type matching of `Xxx` across
branches (SomeHashedBeaconState -> ForkyHashedBeaconState et al) -
`Some` is already used for other types of type classes
* consolidate function naming in BeaconChainDB, use some generics
* import `forks.nim` from other spec modules and move `Forked*` helpers
around to resolve circular imports
* remove `ForkedBeaconState`, use `ForkedHashedBeaconState` throughout
(less data shuffling between the types)
* fix several cases of states being stored on stack in tests, causing
random failures on some platforms
* remove reading json support from ncli - this should be ported to the
rest json reading instead (doesn't currently work because stack sizes)
So far, the REST config response did not include all spec constants.
The spec for `/eth/v1/config/spec` defines that the response should
include constants for all hard forks known by the beacon node. This
patch extends the corresponding response to include more constants.
* Initial commit.
* Fix path.
* Add validator keys to indices cache mechanism.
Move syncComitteeParticipants to common place.
* Fix sync participants order issue.
* Fix error code when state could not be found.
Refactor `state/validators` to use keysToIndices mechanism.
* Fix RestValidatorIndex to ValidatorIndex conversion TODOs.
* Address review comments.
* Fix REST test rules.
Similar to the existing `RewardInfo`, this PR adds the infrastructure
needed to export epoch processing information from altair+. Because
accounting is done somewhat differently, the PR uses a fork-specific
object to extrct the information in order to make the cost on the spec
side low.
* RewardInfo -> EpochInfo, ForkedEpochInfo
* use array for computing new sync committee
* avoid repeated total active balance computations in block processing
* simplify proposer index check
* simplify epoch transition tests
* pre-compute base increment and reuse in epoch processing, and a few
other small optimizations
This PR introduces the type and does the heavy lifting in terms of
refactoring - the tools that use the accounting will need separate PR:s
(as well as refinements to the exportred information)
* reorganize ssz dependencies
This PR continues the work in
https://github.com/status-im/nimbus-eth2/pull/2646,
https://github.com/status-im/nimbus-eth2/pull/2779 as well as past
issues with serialization and type, to disentangle SSZ from eth2 and at
the same time simplify imports and exports with a structured approach.
The principal idea here is that when a library wants to introduce SSZ
support, they do so via 3 files:
* `ssz_codecs` which imports and reexports `codecs` - this covers the
basic byte conversions and ensures no overloads get lost
* `xxx_merkleization` imports and exports `merkleization` to specialize
and get access to `hash_tree_root` and friends
* `xxx_ssz_serialization` imports and exports `ssz_serialization` to
specialize ssz for a specific library
Those that need to interact with SSZ always import the `xxx_` versions
of the modules and never `ssz` itself so as to keep imports simple and
safe.
This is similar to how the REST / JSON-RPC serializers are structured in
that someone wanting to serialize spec types to REST-JSON will import
`eth2_rest_serialization` and nothing else.
* split up ssz into a core library that is independendent of eth2 types
* rename `bytes_reader` to `codec` to highlight that it contains coding
and decoding of bytes and native ssz types
* remove tricky List init overload that causes compile issues
* get rid of top-level ssz import
* reenable merkleization tests
* move some "standard" json serializers to spec
* remove `ValidatorIndex` serialization for now
* remove test_ssz_merkleization
* add tests for over/underlong byte sequences
* fix broken seq[byte] test - seq[byte] is not an SSZ type
There are a few things this PR doesn't solve:
* like #2646 this PR is weak on how to handle root and other
dontSerialize fields that "sometimes" should be computed - the same
problem appears in REST / JSON-RPC etc
* Fix a build problem on macOS
* Another way to fix the macOS builds
Co-authored-by: Zahary Karadjov <zahary@gmail.com>
The spec imports are a mess to work with, so this branch cleans them up
a bit to ensure that we avoid generic sandwitches and that importing
stuff generally becomes easier.
* reexport crypto/digest/presets because these are part of the public
symbol set of the rest of the spec types
* don't export `merge` types from `base` - this causes circular deps
* fix circular deps in `ssz/spec_types` - this is the first step in
disentangling ssz from spec
* be explicit about phase0 vs altair - longer term, `altair` will become
the "natural" type set, then merge and so on, so no point in giving
`phase0` special preferential treatment
Simpler module name for stuff that covers forks
* check that runtime config matches database state
* also include some assorted altair cleanups
* use "standard" genesis fork in local testnet to work around missing
runtime config support
* add aggregated attestation tracing to logtrace and enable it in Jenkins CI
* use a slightly less cryptic acronym than aasr
* mostly, nimbus and the eth2 spec use aggregate attestation, not aggregated attestation
* Implement split preset/config support
This is the initial bulk refactor to introduce runtime config values in
a number of places, somewhat replacing the existing mechanism of loading
network metadata.
It still needs more work, this is the initial refactor that introduces
runtime configuration in some of the places that need it.
The PR changes the way presets and constants work, to match the spec. In
particular, a "preset" now refers to the compile-time configuration
while a "cfg" or "RuntimeConfig" is the dynamic part.
A single binary can support either mainnet or minimal, but not both.
Support for other presets has been removed completely (can be readded,
in case there's need).
There's a number of outstanding tasks:
* `SECONDS_PER_SLOT` still needs fixing
* loading custom runtime configs needs redoing
* checking constants against YAML file
* yeerongpilly support
`build/nimbus_beacon_node --network=yeerongpilly --discv5:no --log-level=DEBUG`
* load fork epoch from config
* fix fork digest sent in status
* nicer error string for request failures
* fix tools
* one more
* fixup
* fixup
* fixup
* use "standard" network definition folder in local testnet
Files are loaded from their standard locations, including genesis etc,
to conform to the format used in the `eth2-networks` repo.
* fix launch scripts, allow unknown config values
* fix base config of rest test
* cleanups
* bundle mainnet config using common loader
* fix spec links and names
* only include supported preset in binary
* drop yeerongpilly, add altair-devnet-0, support boot_enr.yaml
* add Altair support to the block quarantine
* switch some spec/datatypes imports to spec/datatypes/base
* add Altair support to block_clearance
* allow runtime configuration of Altair transition slot
* enable Altair in block_sim, including in CI
* use ForkedHashedBeaconState in StateData
* fix FAR_FUTURE_EPOCH -> slot overflow; almost always use assign()
* avoid stack allocation in maybeUpgradeStateToAltair()
* create and use dispatch functions for check_attester_slashing(), check_proposer_slashing(), and check_voluntary_exit()
* use getStateRoot() instead of various state.data.hbsPhase0.root
* remove withStateVars.hashedState(), which doesn't work as a design anymore
* introduce spec/datatypes/altair into beacon_chain_db
* fix inefficient codegen for getStateField(largeStateField)
* state_transition_slots() doesn't either need/use blocks or runtime presets
* combine process_slots(HBS)/state_transition_slots(HBS) which differ only in last-slot htr optimization
* getStateField(StateData, ...) was replaced by getStateField(ForkedHashedBeaconState, ...)
* fix rollback
* switch some state_transition(), process_slots, makeTestBlocks(), etc to use ForkedHashedBeaconState
* remove state_transition(phase0.HashedBeaconState)
* remove process_slots(phase0.HashedBeaconState)
* remove state_transition_block(phase0.HashedBeaconState)
* remove unused callWithBS(); separate case expression from if statement
* switch back from nested-ref-object construction to (ref Foo)(Bar())
* use StateData in place of BeaconState outside state transition code
* propagate more StateData usage
* remove withStateVars().state
* wrap get_beacon_committee(BeaconState, ...) as gbc(StateData, ...)
* switch makeAttestation() to use StateData
* use StateData wrapper/dispatcher for get_committee_count_per_slot()
* convert AttestationCache.init(), weak subjectivity functions, and updateValidatorMetrics()
* add get_shuffled_active_validator_indices(StateData) and get_block_root_at_slot(StateData)
* switch makeAttestationData() to StateData
* sync AllTests-mainnet.md after rebase
* Revert "Revert "Upgrade database schema" (#2570)"
This reverts commit 6057c2ffb4.
* ssz: fix loading empty lists into existing instances
Not a problem earlier because we didn't reuse instances
* bump nim-eth
* bump nim-web3
The `kvstore` design we're using now turns out to not be the best way to
use `sqlite` - in particular, there are some significant benefits to
using rowid in certain situations and to keep data in separate tables.
With this branch, there are massive improvements in startup time
(seconds instead of minutes) and state/block storage and pruning times
(milliseconds instead of seconds) - these improvements can in particular
be seen on slow drives and translate directly into better attestation
performance.
* update kvstore to new keyspace design
* remove `DirStoreRef` and the hidden `--state-db-kind` option - this
was an experiment to store large blobs in files, but with the new
kvstore, there's no compelling reason to do so
* remove `DbMap` - unused and would need updating for new keyspace
design
* introduce separate tables for each data type (blocks, states etc)
* remove "WITHOUT ROWID" pessimization for tables with large blobs
* close DbSeq statements explicitly (and earlier)
* store beacon block summaries in separate table, without SSZ
compression and load them all with single query on startup
* stop storing backwards compat full states
* mark genesis beacon block as trusted
* avoid faststreams when loading SSZ data
* remove `DisagreementBehavior` (unused)
Currently, we have a bit of a convoluted flow where when sending
attestations, we start broadcasting them over gossip then pass them to
the attestation validation to include them in the local attestation pool
- it should be the other way around: we should be checking attestations
_before_ gossipping them - this serves as an additional safety net to
ensure that we don't publish junk - this becomes more important when
publishing attestations from the API.
Also, the REST API was performing its own validation meaning
attestations coming from REST would be validated twice - finally, the
JSON RPC wasn't pre-validating and would happily broadcast invalid
attestations.
* Unified attestation production pipeline with the same flow for gossip,
locally and API-produced attestations: all are now validated and entered
into the pool, then broadcast/republished
* Refactor subnet handling with specific SubnetId alias, streamlining
where subnets are computed, avoiding the need to pass around the number
of active validators
* Move some of the subnet handling code to eth2_network
* Use BitArray throughout for subnet handling
This also makes future efforts to provide metrics and logs for
attestation efficiency easier
* Export rewards from epoch transition
* Use less memory for reward calculation (bool -> set[enum], field
alignment)
* Reuse reward memory when replaying, avoiding spike
* Allow replaying any range in ncli_db benchmark
* REST API test framework and tests.
* Fix ValidatorIndex tests to properly handle int32, but not uint32 values.
* Fix tests to follow latest REST fixes.
* refactor restapi.sh
and add it to the test suite
* Fix issues.
Add delay timeout which is required.
* Fix restapi.sh script for Windows.
Co-authored-by: Ștefan Talpalaru <stefantalpalaru@yahoo.com>
* set upper bound on EpochRef cache
* max 32 EpochRef instances
* less memory waste in BlockRef by removing EpochRef seq that is mostly
unused (~20mb)
* less memory waste in dag block lookup by not keeping an extra copy of
digest (~70mb)
* fix `==` and `$` for Eth2Digest
* remove `ChainDAG.tmpState` (~50mb?)
all in all, this branch cuts mainnet memory usage by ~160-180mb and puts
limits on EpochRef cache usage - where normally it hovered around 950mb
before, it's now sitting at 600-700mb on my machine.
* docs
* initial immutable validator database factoring
* remove changes from chain_dag: this abstraction properly belongs in beacon_chain_db
* add merging mutable/immutable validator portions; individually test database roundtripping of immutable validators and states-sans-immutable-validators
* update test summaries
* use stew/assign2 instead of Nim assignment
* add reading/writing of immutable validators in chaindag
* remove unused import
* replace chunked k/v store of immutable validators with per-row SQL table storage
* use List instead of HashList
* un-stub some ncli_db code so that it uses
* switch HashArray to array; move BeaconStateNoImmutableValidators from datatypes to beacon_chain_db
* begin only-mutable-part state storage
* uncomment some assigns
* work around https://github.com/nim-lang/Nim/issues/17253
* fix most of the issues/oversights; local sim runs again
* fix test suite by adding missing beaconstate field to copy function
* have ncli bench also store immutable validators
* extract some immutable-validator-specific code from the beacon chain db module
* add more rigorous database state roundtripping, with changing validator sets
* adjust ncli_db to use new schema
* simplify putState/getState by moving all immutable validator accounting into beacon state DB
* remove redundant test case and move code to immutable-beacon-chain module
* more efficient, but still brute-force, mutable+immutable validator merging
* reuse BeaconState in getState
* ensure HashList/HashArray caches are cleared when reusing getState buffers; add ncli_db and a unit test to verify this
* HashList.clear() -> HashList.clearCache()
* only copy incrementally necessary immutable validators
* increase strictness of test cases and fix/work around resulting HashList cache invalidation issues
* remove explanatory scaffolding
* allow for storage of full (with all validators) states for backwards/forwards-compatibility
* adjust DbSeq type usage
* store full, with-validators, state every 64 epochs to enable reverting versions
* reduce memory allocation and intermediate objects in state storage codepath
* eliminate allocation/copying through intermediate BeaconStateNoImmutableValidators objects
* skip benchmarking initial genesis-validator-heavy state store
* always store new-style state and sometimes old-style state
* document intent behind BeaconState/Validator type-punnery
* more accurate failure message on SQLite in-memory database initialization failure
Era files contain 8192 blocks and a state corresponding to the length of
the array holding block roots in the state, meaning that each block is
verifiable using the pubkeys and block roots from the state. Of course,
one would need to know the root of the state as well, which is available
in the first block of the _next_ file - or known from outside.
This PR also adds an implementation to write e2s, e2i and era files, as
well as a python script to inspect them.
All in all, the format is very similar to what goes on in the network
requests meaning it can trivially serve as a backing format for serving
said requests.
Mainnet, up to the first 671k slots, take up 3.5gb - in each era file,
the BeaconState contributes about 9mb at current validator set sizes, up
from ~3mb in the early blocks, for a grand total of ~558mb for the 82 eras
tested - this overhead could potentially be calculated but one would lose
the ability to verify individual blocks (eras could still be verified using
historical roots).
```
-rw-rw-r--. 1 arnetheduck arnetheduck 16 5 mar 11.47 ethereum2-mainnet-00000000-00000001.e2i
-rw-rw-r--. 1 arnetheduck arnetheduck 1,8M 5 mar 11.47 ethereum2-mainnet-00000000-00000001.e2s
-rw-rw-r--. 1 arnetheduck arnetheduck 65K 5 mar 11.47 ethereum2-mainnet-00000001-00000001.e2i
-rw-rw-r--. 1 arnetheduck arnetheduck 18M 5 mar 11.47 ethereum2-mainnet-00000001-00000001.e2s
...
-rw-rw-r--. 1 arnetheduck arnetheduck 65K 5 mar 11.52 ethereum2-mainnet-00000051-00000001.e2i
-rw-rw-r--. 1 arnetheduck arnetheduck 68M 5 mar 11.52 ethereum2-mainnet-00000051-00000001.e2s
-rw-rw-r--. 1 arnetheduck arnetheduck 61K 5 mar 11.11 ethereum2-mainnet-00000052-00000001.e2i
-rw-rw-r--. 1 arnetheduck arnetheduck 62M 5 mar 11.11 ethereum2-mainnet-00000052-00000001.e2s
```
* database state storage benchmarking via ncli_db
* more cleanups from immutable validator state branch
* unexport some eth2_network constants and remove unused variables/templates
* make two PeerScore constants public
* Create CLI tool for slashing export
* Use SQLite as a DB instead of a KV-store
* Keeps v1 and v2 DBs around
* Uses the same schema as Lighthouse v1.1.0
* Passes all interchange tests + skeleton of finalization pruning
* Removes tests that would violate v5 / minimal slashing DB and MinSlot rules
* Migration tool added using low-watermark scheme for faster migration of large number of validators
* performance fixes
* don't mark tree cache as dirty on read-only List accesses
* store only blob in memory for keys and signatures, parse blob lazily
* compare public keys by blob instead of parsing / converting to raw
* compare Eth2Digest using non-constant-time comparison
* avoid some unnecessary validator copying
This branch will in particular speed up deposit processing which has
been slowing down block replay.
Pre (mainnet, 1600 blocks):
```
All time are ms
Average, StdDev, Min, Max, Samples, Test
Validation is turned off meaning that no BLS operations are performed
3450.269, 0.000, 3450.269, 3450.269, 1, Initialize DB
0.417, 0.822, 0.036, 21.098, 1400, Load block from database
16.521, 0.000, 16.521, 16.521, 1, Load state from database
27.906, 50.846, 8.104, 1507.633, 1350, Apply block
52.617, 37.029, 20.640, 135.938, 50, Apply epoch block
```
Post:
```
3502.715, 0.000, 3502.715, 3502.715, 1, Initialize DB
0.080, 0.560, 0.035, 21.015, 1400, Load block from database
17.595, 0.000, 17.595, 17.595, 1, Load state from database
15.706, 11.028, 8.300, 107.537, 1350, Apply block
33.217, 12.622, 17.331, 60.580, 50, Apply epoch block
```
* more perf fixes
* load EpochRef cache into StateCache more aggressively
* point out security concern with public key cache
* reuse proposer index from state when processing block
* avoid genericAssign in a few more places
* don't parse key when signature is unparseable
* fix `==` overload for Eth2Digest
* preallocate validator list when getting active validators
* speed up proposer index calculation a little bit
* reuse cache when replaying blocks in ncli_db
* avoid a few more copying loops
```
Average, StdDev, Min, Max, Samples, Test
Validation is turned off meaning that no BLS operations are performed
3279.158, 0.000, 3279.158, 3279.158, 1, Initialize DB
0.072, 0.357, 0.035, 13.400, 1400, Load block from database
17.295, 0.000, 17.295, 17.295, 1, Load state from database
5.918, 9.896, 0.198, 98.028, 1350, Apply block
15.888, 10.951, 7.902, 39.535, 50, Apply epoch block
0.000, 0.000, 0.000, 0.000, 0, Database block store
```
* clear full balance cache before processing rewards and penalties
```
All time are ms
Average, StdDev, Min, Max, Samples, Test
Validation is turned off meaning that no BLS operations are performed
3947.901, 0.000, 3947.901, 3947.901, 1, Initialize DB
0.124, 0.506, 0.026, 202.370, 363345, Load block from database
97.614, 0.000, 97.614, 97.614, 1, Load state from database
0.186, 0.188, 0.012, 99.561, 357262, Advance slot, non-epoch
14.161, 5.966, 1.099, 395.511, 11524, Advance slot, epoch
1.372, 4.170, 0.017, 276.401, 363345, Apply block, no slot processing
0.000, 0.000, 0.000, 0.000, 0, Database block store
```
It turns out that we often save lots of states in the database that are
the result of empty slot processing only - here, we make sure to only
save a state if a block follows - this fixes several issues:
* empty slot states are not always pruned leading to state database size
explosion
* storing states is (very) slow which slows down processing in general,
so we should only do it when it's likely to be useful
* attestation processing doesn't get stuck on saving random states that
won't appear in the chain history
about 40% better slot processing times (with LTO enabled) - these don't
do BLS but are used
heavily during replay (state transition = slot + block transition)
tests using a recent medalla state and advancing it 1000 slots:
```
./ncli slots --preState2:state-302271-3c1dbf19-c1f944bf.ssz --slot:1000
--postState2:xx.ssz
```
pre:
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
39.236, 0.000, 39.236, 39.236, 1,
Load state from file
0.049, 0.002, 0.046, 0.063, 968,
Apply slot
256.504, 81.008, 213.471, 591.902, 32,
Apply epoch slot
28.597, 0.000, 28.597, 28.597, 1,
Save state to file
```
cast:
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
37.079, 0.000, 37.079, 37.079, 1,
Load state from file
0.042, 0.002, 0.040, 0.090, 968,
Apply slot
215.552, 68.763, 180.155, 500.103, 32,
Apply epoch slot
25.106, 0.000, 25.106, 25.106, 1,
Save state to file
```
cast+rewards:
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
40.049, 0.000, 40.049, 40.049, 1,
Load state from file
0.048, 0.001, 0.045, 0.060, 968,
Apply slot
164.981, 76.273, 142.099, 477.868, 32,
Apply epoch slot
28.498, 0.000, 28.498, 28.498, 1,
Save state to file
```
cast+rewards+shr
```
All time are ms
Average, StdDev, Min, Max, Samples,
Test
Validation is turned off meaning that no BLS operations are performed
12.898, 0.000, 12.898, 12.898, 1,
Load state from file
0.039, 0.002, 0.038, 0.054, 968,
Apply slot
139.971, 68.797, 120.088, 428.844, 32,
Apply epoch slot
24.761, 0.000, 24.761, 24.761, 1,
Save state to file
```
* add ncli_db subcommand to prune database of unnecessary blocks, states, and state roots
* tweak comments
* reduce default aggressiveness in pruning old states
* move copyPrunedDatabase() to ncli_db, as it's not generally useful as part of beacon_chain_db and doesn't use any internal interfaces
* removed the BlockPool type and all of the proxy functions around it - passing the chain DAG and the quarantine explicitly where appropriately - they don't need to be bundled in a type
* fixed the build after the rebase
* combine ncli_hash_tree_root and ncli_pretty into ncli_ssz
* disable ncli_query building by default
* fold ncli_transition into ncli_ssz and rename to ncli
* limit attestations kept in attestation pool
With fork choice updated, the attestation pool only needs to keep track
of attestations that will eventually end up in blocks - we can thus
limit the horizon of attestations that we keep more aggressively.
To get here, we expose getEpochRef which gets metadata about a
particular epochref, and make sure to populate it when a block is added
- this ensures that state rewinds during block addition are minimized.
In addition, we'll use the target root/epoch when validating
attestations - this helps minimize the number of different states that
we need to rewind to, in general.
* remove CandidateChains.justifiedState
unused
* remove BlockPools.Head object
* avoid quadratic quarantine loop
* fix
hash_tree_root was turning up when running beacon_node, turns out to be
repeated hash_tree_root invocations - this pr brings them back down to
normal.
this PR caches the root of a block in the SignedBeaconBlock object -
this has the potential downside that even invalid blocks will be hashed
(as part of deserialization) - later, one could imagine delaying this
until checks have passed
there's also some cleanup of the `cat=` logs which were applied randomly
and haphazardly, and to a large degree are duplicated by other
information in the log statements - in particular, topics fulfill the
same role
* cleanups
* fix ncli state root check flag
* add block dump to ncli_db
* limit ncli_db benchmark length
* tone down finalization logs
* introduce trusted blocks
We only store blocks whose signature we've verified in the database - as
such, there's no need to check it again, and most importantly, no need
to deserialize the signature when loading from database.
50x startup time improvement, 200x block load time improvement.
* fix rewinding when deposits have invalid signature
* speed up ancestor iteration by avoiding copy
* avoid deserializing signatures for trusted data
* load blocks lazily when rewinding (less memory used)
* chronicles workarounds
* document trustedbeaconblock
* don't write blocks that get added to database
* don't write states
* write to folders
* add state dumping feature to `ncli_db` to get any known state from the
database
* random fixes
* create dump dir on startup
* don't crash on failure to write dump
* fix a few `uint64` instances being used when indexing arrays - this
should be a compile error but isn't due to compiler bugs
* fix standalone test_block_pool compilation
* add signed block processing in ncli
* reuse cache entry instead of allocating a new one
* allow for small clock disparities when validating blocks
* reorder ssz
* split into hash_trees and ssz_serialization, roughly, for hashing and
IO
* move bitseqs into ssz (from stew)
* clean up imports
* docs, imports
* be stricter about SSZ length prefix
* compute zeroHash list at compile time
* remove SSZ schema stuff
* move SSZ navigation to ncli
* cleanup a few leftover openArray uses
* ssz: move ref support outside
Instead of allocating ref's inside SSZ, move it to separate helper:
* makes `ref` allocations explicit
* less magic inside SSZ
* `ref` in nim generally means reference whereas SSZ was loading as
value - if a type indeed used references it would get copies instead of
references to a single value on roundtrip which is unexpected
TODO: EF tests would benefit from some refactoring since they all do the
same thing practically..
Co-authored-by: Zahary Karadjov <zahary@gmail.com>
In BlockPool, we keep the head state around, so it's trivial to restore
the temporary state there and keep going as if nothing happened.
This solves 3 problems:
* stack space - the state copy on mainnet is huge
* GC scanning - using stack space for state slows down the GC
significantly
* reckless copying - the copy itself takes a long time
In state_sim, we'll do the same and allocate on heap - this helps a
little with GC - without it, the collection of the temporary strings
created with `toHex` while printing the json dominates the trace.
* Initial implementation of runtime bls skipping.
Add libnfuzz skipBLSValidation handling, check that it propagates.
* Rename skipBLSValidation -> skipBlsValidation, start skipStateRootValidation
* Replace skipValidation flags with more granular flags.
Also added skipBlockParentRootValidation flag
Mainly replaced with skipBlsValidation but also StateRoot or
BlockParentRootValidation flags where appropriate.
* Adjust interop test to pass when skipping merkle validation.
* Stop skipping validation for mainchain_monitor.
* Remove comment.
* Also skipMerkleValidation for test_beacon_chain_db.
* beacon node code cleanup
* rudimentary error checking on mainnet monitor
* start client even when sending deposit
* work around missing block number exception
* connect to testnet with web3 url
* pretty-print digests in json
tersec
Jacek Sieka
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Mamy Ratsimbazafy
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Joao Gabriel Carvalho