nimbus-eth2/ncli/ncli_db.nim

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import
os, stats, strformat, tables,
chronicles, confutils, stew/byteutils, eth/db/kvstore_sqlite3,
../beacon_chain/networking/network_metadata,
../beacon_chain/[beacon_chain_db, extras],
../beacon_chain/consensus_object_pools/blockchain_dag,
../beacon_chain/spec/[crypto, datatypes, digest, helpers,
state_transition, presets],
../beacon_chain/ssz, ../beacon_chain/ssz/sszdump,
../research/simutils
type Timers = enum
tInit = "Initialize DB"
tLoadBlock = "Load block from database"
tLoadState = "Load state from database"
performance fixes (#2259) * performance fixes * don't mark tree cache as dirty on read-only List accesses * store only blob in memory for keys and signatures, parse blob lazily * compare public keys by blob instead of parsing / converting to raw * compare Eth2Digest using non-constant-time comparison * avoid some unnecessary validator copying This branch will in particular speed up deposit processing which has been slowing down block replay. Pre (mainnet, 1600 blocks): ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3450.269, 0.000, 3450.269, 3450.269, 1, Initialize DB 0.417, 0.822, 0.036, 21.098, 1400, Load block from database 16.521, 0.000, 16.521, 16.521, 1, Load state from database 27.906, 50.846, 8.104, 1507.633, 1350, Apply block 52.617, 37.029, 20.640, 135.938, 50, Apply epoch block ``` Post: ``` 3502.715, 0.000, 3502.715, 3502.715, 1, Initialize DB 0.080, 0.560, 0.035, 21.015, 1400, Load block from database 17.595, 0.000, 17.595, 17.595, 1, Load state from database 15.706, 11.028, 8.300, 107.537, 1350, Apply block 33.217, 12.622, 17.331, 60.580, 50, Apply epoch block ``` * more perf fixes * load EpochRef cache into StateCache more aggressively * point out security concern with public key cache * reuse proposer index from state when processing block * avoid genericAssign in a few more places * don't parse key when signature is unparseable * fix `==` overload for Eth2Digest * preallocate validator list when getting active validators * speed up proposer index calculation a little bit * reuse cache when replaying blocks in ncli_db * avoid a few more copying loops ``` Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3279.158, 0.000, 3279.158, 3279.158, 1, Initialize DB 0.072, 0.357, 0.035, 13.400, 1400, Load block from database 17.295, 0.000, 17.295, 17.295, 1, Load state from database 5.918, 9.896, 0.198, 98.028, 1350, Apply block 15.888, 10.951, 7.902, 39.535, 50, Apply epoch block 0.000, 0.000, 0.000, 0.000, 0, Database block store ``` * clear full balance cache before processing rewards and penalties ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3947.901, 0.000, 3947.901, 3947.901, 1, Initialize DB 0.124, 0.506, 0.026, 202.370, 363345, Load block from database 97.614, 0.000, 97.614, 97.614, 1, Load state from database 0.186, 0.188, 0.012, 99.561, 357262, Advance slot, non-epoch 14.161, 5.966, 1.099, 395.511, 11524, Advance slot, epoch 1.372, 4.170, 0.017, 276.401, 363345, Apply block, no slot processing 0.000, 0.000, 0.000, 0.000, 0, Database block store ```
2021-01-25 12:04:18 +00:00
tAdvanceSlot = "Advance slot, non-epoch"
tAdvanceEpoch = "Advance slot, epoch"
tApplyBlock = "Apply block, no slot processing"
tDbLoad = "Database load"
tDbStore = "Database store"
type
DbCmd* = enum
bench
dumpState
dumpBlock
pruneDatabase
rewindState
# TODO:
# This should probably allow specifying a run-time preset
DbConf = object
databaseDir* {.
defaultValue: ""
desc: "Directory where `nbc.sqlite` is stored"
name: "db" }: InputDir
eth2Network* {.
desc: "The Eth2 network preset to use"
name: "network" }: Option[string]
case cmd* {.
command
desc: ""
.}: DbCmd
of bench:
slots* {.
defaultValue: 50000
desc: "Number of slots to run benchmark for".}: uint64
storeBlocks* {.
defaultValue: false
desc: "Store each read block back into a separate database".}: bool
storeStates* {.
defaultValue: false
desc: "Store a state each epoch into a separate database".}: bool
performance fixes (#2259) * performance fixes * don't mark tree cache as dirty on read-only List accesses * store only blob in memory for keys and signatures, parse blob lazily * compare public keys by blob instead of parsing / converting to raw * compare Eth2Digest using non-constant-time comparison * avoid some unnecessary validator copying This branch will in particular speed up deposit processing which has been slowing down block replay. Pre (mainnet, 1600 blocks): ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3450.269, 0.000, 3450.269, 3450.269, 1, Initialize DB 0.417, 0.822, 0.036, 21.098, 1400, Load block from database 16.521, 0.000, 16.521, 16.521, 1, Load state from database 27.906, 50.846, 8.104, 1507.633, 1350, Apply block 52.617, 37.029, 20.640, 135.938, 50, Apply epoch block ``` Post: ``` 3502.715, 0.000, 3502.715, 3502.715, 1, Initialize DB 0.080, 0.560, 0.035, 21.015, 1400, Load block from database 17.595, 0.000, 17.595, 17.595, 1, Load state from database 15.706, 11.028, 8.300, 107.537, 1350, Apply block 33.217, 12.622, 17.331, 60.580, 50, Apply epoch block ``` * more perf fixes * load EpochRef cache into StateCache more aggressively * point out security concern with public key cache * reuse proposer index from state when processing block * avoid genericAssign in a few more places * don't parse key when signature is unparseable * fix `==` overload for Eth2Digest * preallocate validator list when getting active validators * speed up proposer index calculation a little bit * reuse cache when replaying blocks in ncli_db * avoid a few more copying loops ``` Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3279.158, 0.000, 3279.158, 3279.158, 1, Initialize DB 0.072, 0.357, 0.035, 13.400, 1400, Load block from database 17.295, 0.000, 17.295, 17.295, 1, Load state from database 5.918, 9.896, 0.198, 98.028, 1350, Apply block 15.888, 10.951, 7.902, 39.535, 50, Apply epoch block 0.000, 0.000, 0.000, 0.000, 0, Database block store ``` * clear full balance cache before processing rewards and penalties ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3947.901, 0.000, 3947.901, 3947.901, 1, Initialize DB 0.124, 0.506, 0.026, 202.370, 363345, Load block from database 97.614, 0.000, 97.614, 97.614, 1, Load state from database 0.186, 0.188, 0.012, 99.561, 357262, Advance slot, non-epoch 14.161, 5.966, 1.099, 395.511, 11524, Advance slot, epoch 1.372, 4.170, 0.017, 276.401, 363345, Apply block, no slot processing 0.000, 0.000, 0.000, 0.000, 0, Database block store ```
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printTimes* {.
defaultValue: true
desc: "Print csv of block processing time".}: bool
resetCache* {.
defaultValue: false
desc: "Process each block with a fresh cache".}: bool
of dumpState:
stateRoot* {.
argument
desc: "State roots to save".}: seq[string]
of dumpBlock:
blockRootx* {.
argument
desc: "Block roots to save".}: seq[string]
of pruneDatabase:
dryRun* {.
defaultValue: false
desc: "Don't write to the database copy; only simulate actions; default false".}: bool
keepOldStates* {.
defaultValue: true
desc: "Keep pre-finalization states; default true".}: bool
verbose* {.
defaultValue: false
desc: "Enables verbose output; default false".}: bool
of rewindState:
blockRoot* {.
argument
desc: "Block root".}: string
slot* {.
argument
desc: "Slot".}: uint64
proc cmdBench(conf: DbConf, runtimePreset: RuntimePreset) =
var timers: array[Timers, RunningStat]
echo "Opening database..."
let
db = BeaconChainDB.init(runtimePreset, conf.databaseDir.string)
dbBenchmark = BeaconChainDB.init(runtimePreset, "benchmark")
defer:
db.close()
dbBenchmark.close()
if not ChainDAGRef.isInitialized(db):
echo "Database not initialized"
quit 1
echo "Initializing block pool..."
let pool = withTimerRet(timers[tInit]):
ChainDAGRef.init(runtimePreset, db, {})
echo &"Loaded {pool.blocks.len} blocks, head slot {pool.head.slot}"
var
blockRefs: seq[BlockRef]
blocks: seq[TrustedSignedBeaconBlock]
cur = pool.head
while cur != nil:
blockRefs.add cur
cur = cur.parent
for b in 1..<blockRefs.len: # Skip genesis block
if blockRefs[blockRefs.len - b - 1].slot > conf.slots:
break
withTimer(timers[tLoadBlock]):
blocks.add db.getBlock(blockRefs[blockRefs.len - b - 1].root).get()
let state = (ref HashedBeaconState)(
root: db.getBlock(blockRefs[^1].root).get().message.state_root
)
withTimer(timers[tLoadState]):
discard db.getState(state[].root, state[].data, noRollback)
var
cache = StateCache()
loadedState = new BeaconState
performance fixes (#2259) * performance fixes * don't mark tree cache as dirty on read-only List accesses * store only blob in memory for keys and signatures, parse blob lazily * compare public keys by blob instead of parsing / converting to raw * compare Eth2Digest using non-constant-time comparison * avoid some unnecessary validator copying This branch will in particular speed up deposit processing which has been slowing down block replay. Pre (mainnet, 1600 blocks): ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3450.269, 0.000, 3450.269, 3450.269, 1, Initialize DB 0.417, 0.822, 0.036, 21.098, 1400, Load block from database 16.521, 0.000, 16.521, 16.521, 1, Load state from database 27.906, 50.846, 8.104, 1507.633, 1350, Apply block 52.617, 37.029, 20.640, 135.938, 50, Apply epoch block ``` Post: ``` 3502.715, 0.000, 3502.715, 3502.715, 1, Initialize DB 0.080, 0.560, 0.035, 21.015, 1400, Load block from database 17.595, 0.000, 17.595, 17.595, 1, Load state from database 15.706, 11.028, 8.300, 107.537, 1350, Apply block 33.217, 12.622, 17.331, 60.580, 50, Apply epoch block ``` * more perf fixes * load EpochRef cache into StateCache more aggressively * point out security concern with public key cache * reuse proposer index from state when processing block * avoid genericAssign in a few more places * don't parse key when signature is unparseable * fix `==` overload for Eth2Digest * preallocate validator list when getting active validators * speed up proposer index calculation a little bit * reuse cache when replaying blocks in ncli_db * avoid a few more copying loops ``` Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3279.158, 0.000, 3279.158, 3279.158, 1, Initialize DB 0.072, 0.357, 0.035, 13.400, 1400, Load block from database 17.295, 0.000, 17.295, 17.295, 1, Load state from database 5.918, 9.896, 0.198, 98.028, 1350, Apply block 15.888, 10.951, 7.902, 39.535, 50, Apply epoch block 0.000, 0.000, 0.000, 0.000, 0, Database block store ``` * clear full balance cache before processing rewards and penalties ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3947.901, 0.000, 3947.901, 3947.901, 1, Initialize DB 0.124, 0.506, 0.026, 202.370, 363345, Load block from database 97.614, 0.000, 97.614, 97.614, 1, Load state from database 0.186, 0.188, 0.012, 99.561, 357262, Advance slot, non-epoch 14.161, 5.966, 1.099, 395.511, 11524, Advance slot, epoch 1.372, 4.170, 0.017, 276.401, 363345, Apply block, no slot processing 0.000, 0.000, 0.000, 0.000, 0, Database block store ```
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for b in blocks.mitems():
while state[].data.slot < b.message.slot:
let isEpoch = state[].data.slot.epoch() != (state[].data.slot + 1).epoch
withTimer(timers[if isEpoch: tAdvanceEpoch else: tAdvanceSlot]):
let ok = process_slots(state[], state[].data.slot + 1, cache, {})
doAssert ok, "Slot processing can't fail with correct inputs"
var start = Moment.now()
withTimer(timers[tApplyBlock]):
if conf.resetCache:
cache = StateCache()
if not state_transition(
runtimePreset, state[], b, cache, {slotProcessed}, noRollback):
dump("./", b)
echo "State transition failed (!)"
quit 1
performance fixes (#2259) * performance fixes * don't mark tree cache as dirty on read-only List accesses * store only blob in memory for keys and signatures, parse blob lazily * compare public keys by blob instead of parsing / converting to raw * compare Eth2Digest using non-constant-time comparison * avoid some unnecessary validator copying This branch will in particular speed up deposit processing which has been slowing down block replay. Pre (mainnet, 1600 blocks): ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3450.269, 0.000, 3450.269, 3450.269, 1, Initialize DB 0.417, 0.822, 0.036, 21.098, 1400, Load block from database 16.521, 0.000, 16.521, 16.521, 1, Load state from database 27.906, 50.846, 8.104, 1507.633, 1350, Apply block 52.617, 37.029, 20.640, 135.938, 50, Apply epoch block ``` Post: ``` 3502.715, 0.000, 3502.715, 3502.715, 1, Initialize DB 0.080, 0.560, 0.035, 21.015, 1400, Load block from database 17.595, 0.000, 17.595, 17.595, 1, Load state from database 15.706, 11.028, 8.300, 107.537, 1350, Apply block 33.217, 12.622, 17.331, 60.580, 50, Apply epoch block ``` * more perf fixes * load EpochRef cache into StateCache more aggressively * point out security concern with public key cache * reuse proposer index from state when processing block * avoid genericAssign in a few more places * don't parse key when signature is unparseable * fix `==` overload for Eth2Digest * preallocate validator list when getting active validators * speed up proposer index calculation a little bit * reuse cache when replaying blocks in ncli_db * avoid a few more copying loops ``` Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3279.158, 0.000, 3279.158, 3279.158, 1, Initialize DB 0.072, 0.357, 0.035, 13.400, 1400, Load block from database 17.295, 0.000, 17.295, 17.295, 1, Load state from database 5.918, 9.896, 0.198, 98.028, 1350, Apply block 15.888, 10.951, 7.902, 39.535, 50, Apply epoch block 0.000, 0.000, 0.000, 0.000, 0, Database block store ``` * clear full balance cache before processing rewards and penalties ``` All time are ms Average, StdDev, Min, Max, Samples, Test Validation is turned off meaning that no BLS operations are performed 3947.901, 0.000, 3947.901, 3947.901, 1, Initialize DB 0.124, 0.506, 0.026, 202.370, 363345, Load block from database 97.614, 0.000, 97.614, 97.614, 1, Load state from database 0.186, 0.188, 0.012, 99.561, 357262, Advance slot, non-epoch 14.161, 5.966, 1.099, 395.511, 11524, Advance slot, epoch 1.372, 4.170, 0.017, 276.401, 363345, Apply block, no slot processing 0.000, 0.000, 0.000, 0.000, 0, Database block store ```
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if conf.printTimes:
echo b.message.slot, ",", toHex(b.root.data), ",", nanoseconds(Moment.now() - start)
if conf.storeBlocks:
withTimer(timers[tDbStore]):
dbBenchmark.putBlock(b)
if conf.storeStates and state[].data.slot.isEpoch:
withTimer(timers[tDbStore]):
dbBenchmark.putState(state[].root, state[].data)
dbBenchmark.checkpoint()
withTimer(timers[tDbLoad]):
doAssert dbBenchmark.getState(state[].root, loadedState[], noRollback)
if state[].data.slot.epoch mod 16 == 0:
doAssert hash_tree_root(state[].data) == hash_tree_root(loadedState[])
printTimers(false, timers)
proc cmdDumpState(conf: DbConf, preset: RuntimePreset) =
let db = BeaconChainDB.init(preset, conf.databaseDir.string)
defer: db.close()
for stateRoot in conf.stateRoot:
try:
let root = Eth2Digest(data: hexToByteArray[32](stateRoot))
var state = (ref HashedBeaconState)(root: root)
if not db.getState(root, state.data, noRollback):
echo "Couldn't load ", root
else:
dump("./", state[])
except CatchableError as e:
echo "Couldn't load ", stateRoot, ": ", e.msg
proc cmdDumpBlock(conf: DbConf, preset: RuntimePreset) =
let db = BeaconChainDB.init(preset, conf.databaseDir.string)
defer: db.close()
for blockRoot in conf.blockRootx:
try:
let root = Eth2Digest(data: hexToByteArray[32](blockRoot))
if (let blck = db.getBlock(root); blck.isSome):
dump("./", blck.get())
else:
echo "Couldn't load ", root
except CatchableError as e:
echo "Couldn't load ", blockRoot, ": ", e.msg
proc copyPrunedDatabase(
db: BeaconChainDB, copyDb: BeaconChainDB,
dryRun, verbose, keepOldStates: bool) =
## Create a pruned copy of the beacon chain database
let
headBlock = db.getHeadBlock()
tailBlock = db.getTailBlock()
doAssert headBlock.isOk and tailBlock.isOk
doAssert db.getBlock(headBlock.get).isOk
doAssert db.getBlock(tailBlock.get).isOk
var
beaconState: ref BeaconState
finalizedEpoch: Epoch # default value of 0 is conservative/safe
prevBlockSlot = db.getBlock(db.getHeadBlock().get).get.message.slot
beaconState = new BeaconState
let headEpoch = db.getBlock(headBlock.get).get.message.slot.epoch
# Tail states are specially addressed; no stateroot intermediary
if not db.getState(
db.getBlock(tailBlock.get).get.message.state_root, beaconState[],
noRollback):
doAssert false, "could not load tail state"
if not dry_run:
copyDb.putState(beaconState[])
for signedBlock in getAncestors(db, headBlock.get):
if not dry_run:
copyDb.putBlock(signedBlock)
if verbose:
echo "copied block at slot ", signedBlock.message.slot
for slot in countdown(prevBlockSlot, signedBlock.message.slot + 1):
if slot mod SLOTS_PER_EPOCH != 0 or
((not keepOldStates) and slot.epoch < finalizedEpoch):
continue
# Could also only copy these states, head and finalized, plus tail state
let stateRequired = slot.epoch in [finalizedEpoch, headEpoch]
let sr = db.getStateRoot(signedBlock.root, slot)
if sr.isErr:
if stateRequired:
echo "skipping state root required for slot ",
slot, " with root ", signedBlock.root
continue
if not db.getState(sr.get, beaconState[], noRollback):
# Don't copy dangling stateroot pointers
if stateRequired:
doAssert false, "state root and state required"
continue
finalizedEpoch = max(
finalizedEpoch, beaconState.finalized_checkpoint.epoch)
if not dry_run:
copyDb.putStateRoot(signedBlock.root, slot, sr.get)
copyDb.putState(beaconState[])
if verbose:
echo "copied state at slot ", slot, " from block at ", shortLog(signedBlock.message.slot)
prevBlockSlot = signedBlock.message.slot
if not dry_run:
copyDb.putHeadBlock(headBlock.get)
copyDb.putTailBlock(tailBlock.get)
proc cmdPrune(conf: DbConf, preset: RuntimePreset) =
let
db = BeaconChainDB.init(preset, conf.databaseDir.string)
# TODO: add the destination as CLI paramter
copyDb = BeaconChainDB.init(preset, "pruned_db")
defer:
db.close()
copyDb.close()
db.copyPrunedDatabase(copyDb, conf.dryRun, conf.verbose, conf.keepOldStates)
proc cmdRewindState(conf: DbConf, preset: RuntimePreset) =
echo "Opening database..."
let db = BeaconChainDB.init(preset, conf.databaseDir.string)
defer: db.close()
if not ChainDAGRef.isInitialized(db):
echo "Database not initialized"
quit 1
echo "Initializing block pool..."
let dag = init(ChainDAGRef, preset, db)
let blckRef = dag.getRef(fromHex(Eth2Digest, conf.blockRoot))
if blckRef == nil:
echo "Block not found in database"
return
dag.withState(dag.tmpState, blckRef.atSlot(Slot(conf.slot))):
echo "Writing state..."
dump("./", hashedState, blck)
when isMainModule:
var
conf = DbConf.load()
runtimePreset = getRuntimePresetForNetwork(conf.eth2Network)
case conf.cmd
of bench:
cmdBench(conf, runtimePreset)
of dumpState:
cmdDumpState(conf, runtimePreset)
of dumpBlock:
cmdDumpBlock(conf, runtimePreset)
of pruneDatabase:
cmdPrune(conf, runtimePreset)
of rewindState:
cmdRewindState(conf, runtimePreset)