Commit Graph

12 Commits

Author SHA1 Message Date
Jordan Hrycaj 13f51939f6
Core db aristo hasher profiling and timing improvement (#1938)
* Explicitly use shared `Kvt` table on `Ledger` and `Clique` lookup.

why:
  Speeds up lookup time with `Aristo` backend. For writing `Clique` data,
  the `Companion` model allows to write `Clique` data past the database
  locked by evm transactions.

* Implement `CoreDb` profiling with API tracking

why:
  Chasing time spent per APT procs ...

* Implement `Ledger` profiling with API tracking

why:
  Chasing time spent per APT procs ...

* Always hashify when commiting or storing

why:
  A dirty cache makes no sense when committing

* Make sure that a zero key is created when adding/updating vertices

why:
  This is an error fix mainly for edge cases. A typical error was
  that the root key got deleted when there were only a few vertices
  left on the DB.

* Need all created and changed vertices zero-keyed on the cache

why:
  A zero key (i.e. empty Merkle hash) indicates that a vertex key
  needs to be updated. This would not be needed immediately after
  a merge as there is an actual leaf path on the cache layer. But
  after subsequent merge and delete operations this information
  might get blurred.

* Re-org hashing algorithm

why:
  Apart from errors, the previous implementation was too slow for
  two reasons:
  + some control hashes were calculated for debugging (now all
    verification is done in `aristo_check` module)
  + the leaf paths stored on the cache are used to build the
    labelling (aka hashing) schedule; there paths were accumulated
    over successive hash sessions although it is clear that all
    keys were generated, already
2023-12-12 17:47:41 +00:00
Jordan Hrycaj 5462c05dc6
Core db update api tracking (#1907)
* Fix copyright year

* Show elapsed times with enabled `CoreDb` API tracking

* Show elapsed times with enabled `LedgerRef` API tracking

* Reorg `CoreDb` auto destructors for `Aristo` DB

why:
  While `Aristo` supports some parallelism for concurrent database access,
  this comes with a price of management overhead. With a naive approach,
  the auto-destructor will slow down execution because the ledger and
  evm treat the database in a shared mode where a DB descriptor is just
  created and thrown away shortly after.

  This is reflected in the `Coredb` abstraction layer above `Aristo`/`Kvt`
  where a few `Shared` type descriptors are cached and a shared reference
  is returned rather than a disposable new object.

* For `CoreDb` support transaction level tracking

details:
  This is mainly an extra for the legacy DB as `Aristo` and `Kvt` support
  this already.

  Also return an error on the legacy DB backend when `persistent()` is
  called while there are transactions pending (the `persistent()` call
  does nothing otherwise on the legacy backend.)

* Clear compiler warnings (remove unused variables etc.)
2023-11-24 22:16:21 +00:00
Jordan Hrycaj 3e88589eb1
Optional accounts cache module for creating genesis (#1897)
* Split off `ReadOnlyStateDB` from `AccountStateDB` from `state_db.nim`

why:
  Apart from testing, applications use `ReadOnlyStateDB` as an easy
  way to access the accounts ledger. This is well supported by the
  `Aristo` db, but writable mode is only parially supported.

  The writable AccountStateDB` object for modifying accounts is not
  used by production code.

  So, for lecgacy and testing apps, the full support of the previous
  `AccountStateDB` is now enabled by `import db/state_db/read_write`
  and the `import db/state_db` provides read-only mode.

* Encapsulate `AccountStateDB` as `GenesisLedgerRef` or genesis creation

why:
  `AccountStateDB` has poor support for `Aristo` and is not widely used
   in favour of `AccountsLedger` (which will be abstracted as `ledger`.)

   Currently, using other than the `AccountStateDB` ledgers within the
   `GenesisLedgerRef` wrapper is experimental and test only. Eventually,
    the wrapper should disappear so that the `Ledger` object (which
    encapsulates `AccountsCache` and `AccountsLedger`) will prevail.

* For the `Ledger`, provide access to raw accounts `MPT`

why:
  This gives to the `CoreDbMptRef` descriptor from the `CoreDb` (which is
  the legacy version of 	CoreDxMptRef`.) For the new `ledger` API, the
  accounts are based on the `CoreDxMAccRef` descriptor which uses a
  particular sub-system for accounts while legacy applications use the
  `CoreDbPhkRef` equivalent of the `SecureHexaryTrie`.

  The only place where this feature will currently be used is the
 `genesis.nim` source file.

* Fix `Aristo` bugs, missing boundary checks, typos, etc.

* Verify root vertex in `MPT` and account constructors

why:
  Was missing so far, in particular the accounts constructor must
  verify `VertexID(1)

* Fix include file
2023-11-20 11:51:43 +00:00
Jordan Hrycaj c47f021596
Core db and aristo updates for destructor and tx logic (#1894)
* Disable `TransactionID` related functions from `state_db.nim`

why:
  Functions `getCommittedStorage()` and `updateOriginalRoot()` from
  the `state_db` module are nowhere used. The emulation of a legacy
  `TransactionID` type functionality is administratively expensive to
  provide by `Aristo` (the legacy DB version is only partially
  implemented, anyway).

  As there is no other place where `TransactionID`s are used, they will
  not be provided by the `Aristo` variant of the `CoreDb`. For the
  legacy DB API, nothing will change.

* Fix copyright headers in source code

* Get rid of compiler warning

* Update Aristo code, remove unused `merge()` variant, export `hashify()`

why:
  Adapt to upcoming `CoreDb` wrapper

* Remove synced tx feature from `Aristo`

why:
+ This feature allowed to synchronise transaction methods like begin,
  commit, and rollback for a group of descriptors.
+ The feature is over engineered and not needed for `CoreDb`, neither
  is it complete (some convergence features missing.)

* Add debugging helpers to `Kvt`

also:
  Update database iterator, add count variable yield argument similar
  to `Aristo`.

* Provide optional destructors for `CoreDb` API

why;
  For the upcoming Aristo wrapper, this allows to control when certain
  smart destruction and update can take place. The auto destructor works
  fine in general when the storage/cache strategy is known and acceptable
  when creating descriptors.

* Add update option for `CoreDb` API function `hash()`

why;
  The hash function is typically used to get the state root of the MPT.
  Due to lazy hashing, this might be not available on the `Aristo` DB.
  So the `update` function asks for re-hashing the gurrent state changes
  if needed.

* Update API tracking log mode: `info` => `debug

* Use shared `Kvt` descriptor in new Ledger API

why:
  No need to create a new descriptor all the time
2023-11-16 19:35:03 +00:00
Jordan Hrycaj 4feaa2cfab
Aristo db update for short nodes key edge cases (#1887)
* Aristo: Provide key-value list signature calculator

detail:
  Simple wrappers around `Aristo` core functionality

* Update new API for `CoreDb`

details:
+ Renamed new API functions `contains()` => `hasKey()` or `hasPath()`
  which disables the `in` operator on non-boolean 	`contains()` functions
+ The functions `get()` and `fetch()` always return a not-found error if
  there is no item, available. The new functions `getOrEmpty()` and
  `mergeOrEmpty()` return an an empty `Blob` if there is no such key
  found.

* Rewrite `core_apps.nim` using new API from `CoreDb`

* Use `Aristo` functionality for calculating Merkle signatures

details:
  For debugging, the `VerifyAristoForMerkleRootCalc` can be set so
  that `Aristo` results will be verified against the legacy versions.

* Provide general interface for Merkle signing key-value tables

details:
  Export `Aristo` wrappers

* Activate `CoreDb` tests

why:
  Now, API seems to be stable enough for general tests.

* Update `toHex()` usage

why:
  Byteutils' `toHex()` is superior to `toSeq.mapIt(it.toHex(2)).join`

* Split `aristo_transcode` => `aristo_serialise` + `aristo_blobify`

why:
+ Different modules for different purposes
+ `aristo_serialise`: RLP encoding/decoding
+ `aristo_blobify`: Aristo database encoding/decoding

* Compacted representation of small nodes' links instead of Keccak hashes

why:
  Ethereum MPTs use Keccak hashes as node links if the size of an RLP
  encoded node is at least 32 bytes. Otherwise, the RLP encoded node
  value is used as a pseudo node link (rather than a hash.) Such a node
  is nor stored on key-value database. Rather the RLP encoded node value
  is stored instead of a lode link in a parent node instead. Only for
  the root hash, the top level node is always referred to by the hash.

  This feature needed an abstraction of the `HashKey` object which is now
  either a hash or a blob of length at most 31 bytes. This leaves two
  ways of representing an empty/void `HashKey` type, either as an empty
  blob of zero length, or the hash of an empty blob.

* Update `CoreDb` interface (mainly reducing logger noise)

* Fix copyright years (to make `Lint` happy)
2023-11-08 12:18:32 +00:00
Jordan Hrycaj 3198ad1bbd
Fix default pruning for ledger and update core db and ledger logging (#1861)
* Make sure that storage tries are not pruned (by default) on the new Ledger API

why:
  Pruning might kill some unwanted entries from storage tries ending up with an unstable database
  leading to crashes.

* Implement `CoreDb` and `LedgerRef` API tracing

details:
+ Locally enabled at compile time via constants `ProvideCoreDbLegacyAPI`
  and `EnableApiTracking` in either `base.nim` source
+ If enabled it can be selectively turned on/off via public switches in
  the `CoreDb` descriptor.

* Allow suppressing opportunistic `ifNecessaryGetXxx()` functions

why:
  Better troubleshooting when the system crashes (assertions will then
  most probably happen outside an `async` function.)
2023-10-25 15:03:09 +01:00
Jordan Hrycaj 786263c0b8
Core db update api and fix tracer methods (#1816)
* CoreDB: Re-org API

details:
  Legacy API internally uses vertex ID for root node abstraction

* Cosmetics: Move some unit test helpers to common sub-directory

* Extract constant from `accouns_cache.nim` => `constants.nim`

* Fix tracer methods

why:
  Logger dump data were wrongly dumped from the production database. This
  caused an assert exception when iterating over the persistent database
  (instead of the memory logger.) This event in turn was enabled after
  fixing another inconsistency which just set up an empty iterator. Unit
  tests failed to detect that.
2023-10-11 20:09:11 +01:00
Jordan Hrycaj ea2b5b4c7e
Redefine result[] error object as ref (see issue #1796) (#1797)
details:
 This does not affect the legacy interface which is the production one,
 currently.
2023-10-02 19:05:17 +01:00
Jordan Hrycaj 6d132811ba
Core db update providing additional results code interface (#1776)
* Split `core_db/base.nim` into several sources

* Rename `core_db/legacy.nim` => `core_db/legacy_db.nim`

* Update `CoreDb` API, dual methods returning `Result[]` or plain value

detail:
  Plain value methods implemet the legacy API, they defect on error results

* Redesign `CoreDB` direct backend access

why:
  Made the `backend` directive integral part of the API

* Discontinue providing unused or otherwise available functions

details:
+ setTransactionID() removed, not used and not easily replicable in Aristo
+ maybeGet() removed, available via direct backend access
+ newPhk() removed, never used & was experimental anyway

* Update/reorg backend API

why:
+ Added error print function `$$()`
+ General descriptor completion (and optional validation) via `bless()`

* Update `Aristo`/`Kvt` exception handling

why:
  Avoid `CatchableError` exceptions, rather pass them as error code where
  appropriate.

* More `CoreDB` compliant `Aristo` and `Kvt` methods

details:
+ Providing functions like `contains()`, `getVtxRc()` (returns `Result[]`).
+ Additional error code: `NotImplemented`

* Rewrite/reorg of Aristo DB constructor

why:
  Previously used global object `DefaultQidLayoutRef` as default
  initialiser. This object was created at compile time which lead to
  non-gc safe functions.

* Update nimbus/db/core_db/legacy_db.nim

Co-authored-by: Kim De Mey <kim.demey@gmail.com>

* Update nimbus/db/aristo/aristo_transcode.nim

Co-authored-by: Kim De Mey <kim.demey@gmail.com>

* Update nimbus/db/core_db/legacy_db.nim

Co-authored-by: Kim De Mey <kim.demey@gmail.com>

---------

Co-authored-by: Kim De Mey <kim.demey@gmail.com>
2023-09-26 10:21:13 +01:00
Jordan Hrycaj 6bc55d4e6f
Core db aristo and kvt updates preparing for integration (#1760)
* Kvt: Implemented multi-descriptor access on the same backend

why:
  This behaviour mirrors the one of Aristo and can be used for
  simultaneous transactions on Aristo + Kvt

* Kvt: Update database iterators

why:
  Forgot to run on the top layer first

* Kvt: Misc fixes

* Aristo, use `openArray[byte]` rather than `Blob` in prototype

* Aristo, by default hashify right after cloning descriptor

why:
  Typically, a completed descriptor is expected after cloning. Hashing
  can be suppressed by argument flag.

* Aristo provides `replicate()` iterator, similar to legacy `replicate()`

* Aristo API fixes and updates

* CoreDB: Rename `legacy_persistent` => `legacy_rocksdb`

why:
  More systematic, will be in line with Aristo DB which might have
  more than one persistent backends

* CoreDB: Prettify API sources

why:
  Better to read and maintain

details:
  Annotating with custom pragmas which cleans up the prototypes

* CoreDB: Update MPT/put() prototype allowing `CatchableError`

why:
  Will be needed for Aristo API (legacy is OK with `RlpError`)
2023-09-18 21:20:28 +01:00
Jordan Hrycaj d3d172edee
Replace `CoreDbRef` oo-methods by closures (#1668)
why:
* Resolves some compiler coughing when it bails out on persitent
  db constructor inside `test()` caluses (works perfectly outside.)
* API looks cleaner and better to maintain for the price of slightly
  more work at the backend
2023-08-02 21:46:41 +01:00
Jordan Hrycaj 322f1c2e9e
Unified database frontend (#1661)
* Remove 32bit os support from `custom_network` unit test

also:
* Fix compilation annoyance #1648
* Fix unit test on Kiln (changed `merge` logic?)

* Hide unused sources do not compile

why:
* Get them out of the way before major update
* Import and function prototype mismatch -- maybe some changes got out
  of scope.

* Re-implemented `db_chain` as `core_db`

why:
  Hiding `TrieDatabaseRef` and `HexaryTrie` by default allows to replace
  the current db wrapper by some other one, e.g. Aristo

* Support compiler exception warnings for CoreDbRef base methods.

* Allow `pairs()` iterator on all memory based key-value tables

why:
  Previously only available for capture recorder.

* Backport `chain_db.nim` changes into its re-implementation `core_apps.nim`

* Fix exception annotation
2023-07-31 14:43:38 +01:00