Commit Graph

51 Commits

Author SHA1 Message Date
Jordan Hrycaj 1502014e36
Core db+aristo re org tracer (#2123)
* Kvt: Update API hooks

* Aristo: Generalised merging snap proofs, now for multiple state roots

why:
  This accommodates pre-loading partial tries for unit tests

* Aristo: Update some unit tests

* CoreDb+Aristo: Re-factor tracer

why:
  Was bonkers anyway. The main change is that the trace journal is now
  kept in a way similar to a transaction layer so that it can predictably
  interact with DB transactions.

* Ledger: Debugging helper

* Update tracer unit test applicable for `Aristo`

* Fix copyright year

* Disable `dump()` function as compile time default

why:
  This needs to pull in the `rocks_db` library at compile time.
2024-04-03 15:48:35 +00:00
Jordan Hrycaj 8ed40c78e0
Core db+aristo provides tracer funtionality (#2089)
* Aristo: Provide descriptor fork based on search in transaction stack

details:
  Try to find the tx that has a particular pair `(vertex-id,hash-key)`,
  and by extension try filter and backend if the former fails.

* Cleanup & docu

* CoreDb+Aristo: Implement context re-position to earlier in-memory state

why:
  It is a easy way to explore how there can be concurrent access to the
  same backend storage DB with different view states. This one can access
  an earlier state from the transaction stack.

* CoreDb+Aristo: Populate tracer stubs with real functionality

* Update `tracer.nim` to new API

why:
  Legacy API does not sufficiently support `Aristo`

* Fix logging problems in tracer

details:
  Debug logging turned off by default

* Fix function prototypes

* Add Copyright header

* Add tables import

why:
  For older compiler versions on CI
2024-03-21 10:45:57 +00:00
Jordan Hrycaj 0d73637f14
Core db simplify new api storage modes (#2075)
* Aristo+Kvt: Fix backend `dup()` function in api setup

why:
  Backend object is subject to an inheritance cascade which was not
  taken care of, before. Only the base object was duplicated.

* Kvt: Simplify DB clone/peers management

* Aristo: Simplify DB clone/peers management

* Aristo: Adjust unit test for working with memory DB only

why:
  This currently causes some memory corruption persumably in the
  `libc` background layer.

* CoredDb+Kvt: Simplify API for KVT

why:
  Simplified storage models (was over engineered) for better performance
  and code maintenance.

* CoredDb+Aristo: Simplify API for `Aristo`

why:
  Only single database state needed here. Accessing a similar state will
  be implemented from outside this module using a context layer. This
  gives better performance and improves code maintenance.

* Fix Copyright headers

* CoreDb: Turn off API tracking

why:
  CI would ot go through. Was accidentally turned on.
2024-03-14 22:17:43 +00:00
web3-developer 799acf301d
Added support for namespaces to RocksDb kvstore. (#2066)
* Add new RocksNamespaceRef type and remove backups and readonly support from RocksDb KvStore.

* Bump nim-rocksdb to fc2ba4a836b6b47ae1b17d1c45801c7e06585e19

* Fix tests.

* Fix copyright notice.
2024-03-12 11:04:46 +08:00
Jordan Hrycaj 587ca3abbe
Coredb use stackable api for aristo backend (#2060)
* Aristo/Kvt: Provide function hooks APIs

why:
  These APIs can be used for installing tracers, profiling functoinality,
  and other niceties on the databases.

* Aristo: Provide optional API profiling

details:
  It basically is a re-implementation of the `CoreDb` profiling
  implementation

* Kvt: Provide optional API profiling similar to `Aristo`

* CoreDb: Re-implementing profiling using `aristo_profile`

* Ledger: Re-implementing profiling using `aristo_profile`

* CoreDb: Update unit tests for maintainability

* update copyright dates
2024-02-29 21:10:24 +00:00
Jordan Hrycaj 8e18e85288
Aristodb remove obsolete and time consuming admin features (#2048)
* Aristo: Reorg `hashify()` using different schedule algorithm

why:
  Directly calculating the search tree top down from the roots turns
  out to be faster than using the cached structures left over by `merge()`
  and `delete()`.
  Time gains is short of 20%

* Aristo: Remove `lTab[]` leaf entry object type

why:
  Not used anymore. It was previously needed to build the schedule for
  `hashify()`.

* Aristo: Avoid unnecessary re-org of the vertex ID recycling list

why:
  This list can become quite large so a heuristic is employed whether
  it makes sense to re-org.

  Also, re-org check is only done by `delete()` functions.

* Aristo: Remove key/reverse lookup table from tx layers

why:
  It is ignored except for handling proof nodes and costs unnecessary
  run time resources.

  This feature was originally needed to accommodate the mental transition
  from the legacy MPT to the `Aristo` trie :).

* Fix copyright year
2024-02-22 08:24:58 +00:00
andri lim 7c1af9a78f
Add style check to config.nims and fix styles in source code (#2038)
* Add style check to config.nims and fix styles in source code

* Fix copyright year
2024-02-20 10:07:38 +07:00
andri lim bea558740f
Reduce compiler warnings (#2030)
* Reduce compiler warnings

* Reduce compiler warnings in test code
2024-02-16 16:08:07 +07:00
Jordan Hrycaj 1b4a43c140
Aristo db remove over engineered object type (#2027)
* CoreDb: update test suite

* Aristo: Simplify reverse key map

why:
  The reverse key map `pAmk: (root,key) -> {vid,..}` as been simplified to
  `pAmk: key -> {vid,..}` as the state `root` domain argument is not used,
  anymore

* Aristo: Remove `HashLabel` object type and replace it by `HashKey`

why:
  The `HashLabel` object attaches a root hash to a hash key. This is
  nowhere used, anymore.

* Fix copyright
2024-02-14 19:11:59 +00:00
Jordan Hrycaj d5a54f66ee
Core db+friends fix sync bail outs (#2026)
* Aristo: Update schedule runner for `hashify()`

why:
  Width-first schedule walker overlooked resolvable vertex and ended in
  a deadlock situation

* CoreDb+Aristo: Update error code for fringe condition

* Ledger: Remove redundant extra MPT hashing statements

why:
  These statement were used for troubleshooting

* CoreDb: Couch medicine for legacy DB backend

why:
  MPT will occasionally enter inconsistent states after deletion, some
  dirty fix is randomly added to mitgate that.
2024-02-14 10:02:09 +00:00
Jordan Hrycaj 9e50af839f
Core db+aristo update storage trie handling (#2023)
* CoreDb: Test module with additional sample selector cmd line options

* Aristo: Do not automatically remove a storage trie with the account

why:
  This is an unnecessary side effect. Rather than using an automatism, a
  a storage root must be deleted manually.

* Aristo: Can handle stale storage root vertex IDs as empty IDs.

why:
  This is currently needed for the ledger API supporting both, a legacy
  and the `Aristo` database backend.

  This feature can be disabled at compile time by re-setting the
  `LOOSE_STORAGE_TRIE_COUPLING` flag in the `aristo_constants` module.

* CoreDb+Aristo: Flush/delete storage trie when deleting account

why:
  On either backend, a deleted account leave a dangling storage trie on
  the database.

  For consistency nn the legacy backend, storage tries must not be
  deleted as they might be shared by several accounts whereas on `Aristo`
  they are always unique.
2024-02-12 19:37:00 +00:00
Jordan Hrycaj 2c35390bdf
Core db and aristo maintenance update (#2014)
* Aristo: Update error return code

why:
  Failing of `Aristo` function `delete()` might fail because there is
  no such data item on the db. This must return a single error code
  as is done with `fetch()`.

* Ledger: Better error handling

why:
  The `expect()` clauses have been replaced by raising asserts indicating
  the error from the database backend.

   Also, `delete()` failures are legitimate if the item to delete does not
   exist.

* Aristo: Delete function must always leave a label on DB for `hashify()`

why:
  The `hashify()` uses the labels left bu `merge()` and `delete()` to
  compile (and optimise) a scheduler for subsequent hashing.

  Originally, the labels were not used for deleted entries and `delete()`
  still had some edge case where the deletion label was not properly
  handled.

* Aristo: Update `hashify()` scheduler, remove buggy optimisation

why:
  Was left over from version without virtual state roots which did not
  know about account payload leaf vertices referring to storage roots.

* Aristo: Label storage trie account in `delete()` similar to `merge()`

details;
  The `delete()` function applied to a non-static state root (assumed
  to be a storage root) will check the payload of an accounts leaf
  and mark its Merkle keys to be re-checked when runninh `hashify()`

* Aristo: Clean up and re-org recycled vertex IDs in `hashify()`

why:
  Re-organising the recycled vertex IDs list intends to reduce the size of the
  list.

  This list is organised as a LIFO (or stack.) By reorganising it in a way
  so that the least vertex ID numbers are on top, the list will be kept
  smaller as observed on some examples (less than 30%.)

* CoreDb: Accept storage trie deletion requests in non-initialised state

why:
  Due to lazy initialisation, the root vertex ID might not yet exist. So
  the `Aristo` database handlers would reject this call with an error and
  this condition needs to be handled by the API (which realises the lazy
  feature.)

* Cosmetics & code massage, prettify logging

* fix missing import
2024-02-08 16:32:16 +00:00
Jordan Hrycaj 3b306a9689
Aristo: Update unit test suite (#2002)
* Aristo: Update unit test suite

* Aristo/Kvt: Fix iterators

why:
  Generic iterators were not properly updated after backend change

* Aristo: Add sub-trie deletion functionality

why:
  For storage tries linked to an account payload vertex ID, a the
  whole storage trie needs to be deleted with the account.

* Aristo: Reserve vertex ID numbers for static custom state roots

why:
  Static custom state roots may be controlled by an application,
  e.g. for a receipt or a transaction root. The `Aristo` functions
  are agnostic of what the static state roots are when different
  from the internal tree vertex ID 1.

details;
  The `merge()` function applied to a non-static state root (assumed
  to be a storage root) will check the payload of an accounts leaf
  and mark its Merkle keys to be re-checked.

* Aristo: Correct error code symbol

* Aristo: Update error code symbols

* Aristo: Code cosmetics/comments

* Aristo: Fix hashify schedule calculator

why:
  Had a tendency to stop early leaving an incomplete job
2024-02-01 21:27:48 +00:00
Jordan Hrycaj a1161b537b
Core db update storage root management for sub tries (#1964)
* Aristo: Re-phrase `LayerDelta` and `LayerFinal` as object references

why:
  Avoids copying in some cases

* Fix copyright header

* Aristo: Verify `leafTie.root` function argument for `merge()` proc

why:
  Zero root will lead to inconsistent DB entry

* Aristo: Update failure condition for hash labels compiler `hashify()`

why:
  Node need not be rejected as long as links are on the schedule. In
  that case, `redo[]` is to become `wff.base[]` at a later stage.

  This amends an earlier fix, part of #1952 by also testing against
  the target nodes of the `wff.base[]` sets.

* Aristo: Add storage root glue record to `hashify()` schedule

why:
  An account leaf node might refer to a non-resolvable storage root ID.
  Storage root node chains will end up at the storage root. So the link
  `storage-root->account-leaf` needs an extra item in the schedule.

* Aristo: fix error code returned by `fetchPayload()`

details:
  Final error code is implied by the error code form the `hikeUp()`
  function.

* CoreDb: Discard `createOk` argument in API `getRoot()` function

why:
  Not needed for the legacy DB. For the `Arsto` DB, a lazy approach is
  implemented where a stprage root node is created on-the-fly.

* CoreDb: Prevent `$$` logging in some cases

why:
  Logging the function `$$` is not useful when it is used for internal
  use, i.e. retrieving an an error text for logging.

* CoreDb: Add `tryHashFn()` to API for pretty printing

why:
  Pretty printing must not change the hashification status for the
  `Aristo` DB. So there is an independent API wrapper for getting the
  node hash which never updated the hashes.

* CoreDb: Discard `update` argument in API `hash()` function

why:
  When calling the API function `hash()`, the latest state is always
  wanted. For a version that uses the current state as-is without checking,
  the function `tryHash()` was added to the backend.

* CoreDb: Update opaque vertex ID objects for the `Aristo` backend

why:
  For `Aristo`, vID objects encapsulate a numeric `VertexID`
  referencing a vertex (rather than a node hash as used on the
  legacy backend.) For storage sub-tries, there might be no initial
  vertex known when the descriptor is created. So opaque vertex ID
  objects are supported without a valid `VertexID` which will be
  initalised on-the-fly when the first item is merged.

* CoreDb: Add pretty printer for opaque vertex ID objects

* Cosmetics, printing profiling data

* CoreDb: Fix segfault in `Aristo` backend when creating MPT descriptor

why:
  Missing initialisation  error

* CoreDb: Allow MPT to inherit shared context on `Aristo` backend

why:
  Creates descriptors with different storage roots for the same
  shared `Aristo` DB descriptor.

* Cosmetics, update diagnostic message items for `Aristo` backend

* Fix Copyright year
2024-01-11 19:11:38 +00:00
Jordan Hrycaj 43e5f428af
Aristo db kvt maintenance update (#1952)
* Update KVT layers abstraction

details:
  modelled after Aristo layers

* Simplified KVT database iterators (removed item counters)

why:
  Not needed for production functions

* Simplify KVT merge function `layersCc()`

* Simplified Aristo database iterators (removed item counters)

why:
  Not needed for production functions

* Update failure condition for hash labels compiler `hashify()`

why:
  Node need not be rejected as long as links are on the schedule. In
  that case, `redo[]` is to become `wff.base[]` at a later stage.

* Update merging layers and label update functions

why:
+ Merging a stack of layers with `layersCc()` could be simplified
+ Merging layers will optimise the reverse `kMap[]` table maps
  `pAmk: label->{vid, ..}` by deleting empty mappings `label->{}` where
  they are redundant.
+ Updated `layersPutLabel()` for optimising `pAmk[]` tables
2023-12-20 16:19:00 +00:00
Jordan Hrycaj ffa8ad2246
Core db use differential tx layers for aristo and kvt (#1949)
* Fix kvt headers

* Provide differential layers for KVT transaction stack

why:
  Significant performance improvement

* Provide abstraction layer for database top cache layer

why:
  This will eventually implemented as a differential database layers
  or transaction layers. The latter is needed to improve performance.

behavioural changes:
  Zero vertex and keys (i.e. delete requests) are not optimised out
  until the last layer is written to the database.

* Provide differential layers for Aristo transaction stack

why:
  Significant performance improvement
2023-12-19 12:39:23 +00:00
Jordan Hrycaj 13f51939f6
Core db aristo hasher profiling and timing improvement (#1938)
* Explicitly use shared `Kvt` table on `Ledger` and `Clique` lookup.

why:
  Speeds up lookup time with `Aristo` backend. For writing `Clique` data,
  the `Companion` model allows to write `Clique` data past the database
  locked by evm transactions.

* Implement `CoreDb` profiling with API tracking

why:
  Chasing time spent per APT procs ...

* Implement `Ledger` profiling with API tracking

why:
  Chasing time spent per APT procs ...

* Always hashify when commiting or storing

why:
  A dirty cache makes no sense when committing

* Make sure that a zero key is created when adding/updating vertices

why:
  This is an error fix mainly for edge cases. A typical error was
  that the root key got deleted when there were only a few vertices
  left on the DB.

* Need all created and changed vertices zero-keyed on the cache

why:
  A zero key (i.e. empty Merkle hash) indicates that a vertex key
  needs to be updated. This would not be needed immediately after
  a merge as there is an actual leaf path on the cache layer. But
  after subsequent merge and delete operations this information
  might get blurred.

* Re-org hashing algorithm

why:
  Apart from errors, the previous implementation was too slow for
  two reasons:
  + some control hashes were calculated for debugging (now all
    verification is done in `aristo_check` module)
  + the leaf paths stored on the cache are used to build the
    labelling (aka hashing) schedule; there paths were accumulated
    over successive hash sessions although it is clear that all
    keys were generated, already
2023-12-12 17:47:41 +00:00
Jordan Hrycaj 657379f484
Aristo db update merkle hasher (#1925)
* Register paths for added leafs because of trie re-balancing

why:
  While the payload would not change, the prefix in the leaf vertex
  would. So it needs to be flagged for hash recompilation for the
  `hashify()` module.

also:
  Make sure that `Hike` paths which might have vertex links into the
  backend filter are replaced by vertex copies before manipulating.
  Otherwise the vertices on the immutable filter might be involuntarily
  changed.

* Also check for paths where the leaf vertex is on the backend, already

why:
  A a path can have dome vertices on the top layer cache with the
  `Leaf` vertex on  the backend.

* Re-define a void `HashLabel` type.

why:
  A `HashLabel` type is a pair `(root-vertex-ID, Keccak-hash)`. Previously,
  a valid `HashLabel` consisted of a non-empty hash and a non-zero vertex
  ID. This definition leads to a non-unique representation of a void
  `HashLabel` with either root-ID or has void. This has been changed to
  the unique void `HashLabel` exactly if the hash entry is void.

* Update consistency checkers

* Re-org `hashify()` procedure

why:
  Syncing against block chain showed serious deficiencies which produced
  wrong hashes or simply bailed out with error.

  So all fringe cases (mainly due to deleted entries) could be integrated
  into the labelling schedule rather than handling separate fringe cases.
2023-12-04 20:39:26 +00:00
Jordan Hrycaj 5462c05dc6
Core db update api tracking (#1907)
* Fix copyright year

* Show elapsed times with enabled `CoreDb` API tracking

* Show elapsed times with enabled `LedgerRef` API tracking

* Reorg `CoreDb` auto destructors for `Aristo` DB

why:
  While `Aristo` supports some parallelism for concurrent database access,
  this comes with a price of management overhead. With a naive approach,
  the auto-destructor will slow down execution because the ledger and
  evm treat the database in a shared mode where a DB descriptor is just
  created and thrown away shortly after.

  This is reflected in the `Coredb` abstraction layer above `Aristo`/`Kvt`
  where a few `Shared` type descriptors are cached and a shared reference
  is returned rather than a disposable new object.

* For `CoreDb` support transaction level tracking

details:
  This is mainly an extra for the legacy DB as `Aristo` and `Kvt` support
  this already.

  Also return an error on the legacy DB backend when `persistent()` is
  called while there are transactions pending (the `persistent()` call
  does nothing otherwise on the legacy backend.)

* Clear compiler warnings (remove unused variables etc.)
2023-11-24 22:16:21 +00:00
Jordan Hrycaj 3e88589eb1
Optional accounts cache module for creating genesis (#1897)
* Split off `ReadOnlyStateDB` from `AccountStateDB` from `state_db.nim`

why:
  Apart from testing, applications use `ReadOnlyStateDB` as an easy
  way to access the accounts ledger. This is well supported by the
  `Aristo` db, but writable mode is only parially supported.

  The writable AccountStateDB` object for modifying accounts is not
  used by production code.

  So, for lecgacy and testing apps, the full support of the previous
  `AccountStateDB` is now enabled by `import db/state_db/read_write`
  and the `import db/state_db` provides read-only mode.

* Encapsulate `AccountStateDB` as `GenesisLedgerRef` or genesis creation

why:
  `AccountStateDB` has poor support for `Aristo` and is not widely used
   in favour of `AccountsLedger` (which will be abstracted as `ledger`.)

   Currently, using other than the `AccountStateDB` ledgers within the
   `GenesisLedgerRef` wrapper is experimental and test only. Eventually,
    the wrapper should disappear so that the `Ledger` object (which
    encapsulates `AccountsCache` and `AccountsLedger`) will prevail.

* For the `Ledger`, provide access to raw accounts `MPT`

why:
  This gives to the `CoreDbMptRef` descriptor from the `CoreDb` (which is
  the legacy version of 	CoreDxMptRef`.) For the new `ledger` API, the
  accounts are based on the `CoreDxMAccRef` descriptor which uses a
  particular sub-system for accounts while legacy applications use the
  `CoreDbPhkRef` equivalent of the `SecureHexaryTrie`.

  The only place where this feature will currently be used is the
 `genesis.nim` source file.

* Fix `Aristo` bugs, missing boundary checks, typos, etc.

* Verify root vertex in `MPT` and account constructors

why:
  Was missing so far, in particular the accounts constructor must
  verify `VertexID(1)

* Fix include file
2023-11-20 11:51:43 +00:00
Jordan Hrycaj c47f021596
Core db and aristo updates for destructor and tx logic (#1894)
* Disable `TransactionID` related functions from `state_db.nim`

why:
  Functions `getCommittedStorage()` and `updateOriginalRoot()` from
  the `state_db` module are nowhere used. The emulation of a legacy
  `TransactionID` type functionality is administratively expensive to
  provide by `Aristo` (the legacy DB version is only partially
  implemented, anyway).

  As there is no other place where `TransactionID`s are used, they will
  not be provided by the `Aristo` variant of the `CoreDb`. For the
  legacy DB API, nothing will change.

* Fix copyright headers in source code

* Get rid of compiler warning

* Update Aristo code, remove unused `merge()` variant, export `hashify()`

why:
  Adapt to upcoming `CoreDb` wrapper

* Remove synced tx feature from `Aristo`

why:
+ This feature allowed to synchronise transaction methods like begin,
  commit, and rollback for a group of descriptors.
+ The feature is over engineered and not needed for `CoreDb`, neither
  is it complete (some convergence features missing.)

* Add debugging helpers to `Kvt`

also:
  Update database iterator, add count variable yield argument similar
  to `Aristo`.

* Provide optional destructors for `CoreDb` API

why;
  For the upcoming Aristo wrapper, this allows to control when certain
  smart destruction and update can take place. The auto destructor works
  fine in general when the storage/cache strategy is known and acceptable
  when creating descriptors.

* Add update option for `CoreDb` API function `hash()`

why;
  The hash function is typically used to get the state root of the MPT.
  Due to lazy hashing, this might be not available on the `Aristo` DB.
  So the `update` function asks for re-hashing the gurrent state changes
  if needed.

* Update API tracking log mode: `info` => `debug

* Use shared `Kvt` descriptor in new Ledger API

why:
  No need to create a new descriptor all the time
2023-11-16 19:35:03 +00:00
Kim De Mey bb88b50298
Add chronicles formatters for aristo db types (#1889) 2023-11-09 13:22:51 +01:00
Jordan Hrycaj 6e0397e276
Aristo and ledger small updates (#1888)
* Fix debug noise in `hashify()` for perfectly normal situation

why:
  Was previously considered a fixable error

* Fix test sample file names

why:
  The larger test file `goerli68161.txt.gz` is already in the local
  archive. So there is no need to use the smaller one from the external
  repo.

* Activate `accounts_cache` module from `db/ledger`

why:
  A copy of the original `accounts_cache.nim` source to be integrated
  into the `Ledger` module wrapper which allows to switch between
  different `accounts_cache` implementations unser tha same API.

details:
  At a later state, the `db/accounts_cache.nim` wrapper will be
  removed so that there is only one access to that module via
  `db/ledger/accounts_cache.nim`.

* Fix copyright headers in source code
2023-11-08 16:52:25 +00:00
Jordan Hrycaj 4feaa2cfab
Aristo db update for short nodes key edge cases (#1887)
* Aristo: Provide key-value list signature calculator

detail:
  Simple wrappers around `Aristo` core functionality

* Update new API for `CoreDb`

details:
+ Renamed new API functions `contains()` => `hasKey()` or `hasPath()`
  which disables the `in` operator on non-boolean 	`contains()` functions
+ The functions `get()` and `fetch()` always return a not-found error if
  there is no item, available. The new functions `getOrEmpty()` and
  `mergeOrEmpty()` return an an empty `Blob` if there is no such key
  found.

* Rewrite `core_apps.nim` using new API from `CoreDb`

* Use `Aristo` functionality for calculating Merkle signatures

details:
  For debugging, the `VerifyAristoForMerkleRootCalc` can be set so
  that `Aristo` results will be verified against the legacy versions.

* Provide general interface for Merkle signing key-value tables

details:
  Export `Aristo` wrappers

* Activate `CoreDb` tests

why:
  Now, API seems to be stable enough for general tests.

* Update `toHex()` usage

why:
  Byteutils' `toHex()` is superior to `toSeq.mapIt(it.toHex(2)).join`

* Split `aristo_transcode` => `aristo_serialise` + `aristo_blobify`

why:
+ Different modules for different purposes
+ `aristo_serialise`: RLP encoding/decoding
+ `aristo_blobify`: Aristo database encoding/decoding

* Compacted representation of small nodes' links instead of Keccak hashes

why:
  Ethereum MPTs use Keccak hashes as node links if the size of an RLP
  encoded node is at least 32 bytes. Otherwise, the RLP encoded node
  value is used as a pseudo node link (rather than a hash.) Such a node
  is nor stored on key-value database. Rather the RLP encoded node value
  is stored instead of a lode link in a parent node instead. Only for
  the root hash, the top level node is always referred to by the hash.

  This feature needed an abstraction of the `HashKey` object which is now
  either a hash or a blob of length at most 31 bytes. This leaves two
  ways of representing an empty/void `HashKey` type, either as an empty
  blob of zero length, or the hash of an empty blob.

* Update `CoreDb` interface (mainly reducing logger noise)

* Fix copyright years (to make `Lint` happy)
2023-11-08 12:18:32 +00:00
Jordan Hrycaj 3fe0a49a5e
Aristo db allow shorter than 64 nibbles path keys (#1864)
* Aristo: Single `FetchPathNotFound` error in `fetchXxx()` and `hasPath()`

why:
  Missing path hike returns too many detailed reasons why it failed
  which becomes cumbersome to handle.

also:
  Renamed `contains()` => `hasPath()` which disables the `in` operator on
  non-boolean 	`contains()` functions

* Kvt: Renamed `contains()` => `hasKey()`

why:
  which disables the `in` operator on non-boolean 	`contains()` functions

* Aristo: Generalising `HashID` by variable length `PathID`

why:
  There are cases when the `Aristo` database is to be used with
  shorter than 64 nibbles keys when handling transactions indexes
  with sequence IDs.

caveat:
  This patch only works reliable for full length `PathID` values. Tests
  for shorter `PathID` values are currently missing.
2023-10-27 22:36:51 +01:00
Jordan Hrycaj 395580ff9d
Aristo and core db updates (#1800)
* Aristo: remove obsolete functions

* Aristo: Fix error code for non-available hash keys

why:
  Must not return `not-found` when the key is not available (i.e. the
  current changes were not hashified, yet.)

* CoreDB: Provide TDD and test framework
2023-10-03 12:56:13 +01:00
Jordan Hrycaj 6d132811ba
Core db update providing additional results code interface (#1776)
* Split `core_db/base.nim` into several sources

* Rename `core_db/legacy.nim` => `core_db/legacy_db.nim`

* Update `CoreDb` API, dual methods returning `Result[]` or plain value

detail:
  Plain value methods implemet the legacy API, they defect on error results

* Redesign `CoreDB` direct backend access

why:
  Made the `backend` directive integral part of the API

* Discontinue providing unused or otherwise available functions

details:
+ setTransactionID() removed, not used and not easily replicable in Aristo
+ maybeGet() removed, available via direct backend access
+ newPhk() removed, never used & was experimental anyway

* Update/reorg backend API

why:
+ Added error print function `$$()`
+ General descriptor completion (and optional validation) via `bless()`

* Update `Aristo`/`Kvt` exception handling

why:
  Avoid `CatchableError` exceptions, rather pass them as error code where
  appropriate.

* More `CoreDB` compliant `Aristo` and `Kvt` methods

details:
+ Providing functions like `contains()`, `getVtxRc()` (returns `Result[]`).
+ Additional error code: `NotImplemented`

* Rewrite/reorg of Aristo DB constructor

why:
  Previously used global object `DefaultQidLayoutRef` as default
  initialiser. This object was created at compile time which lead to
  non-gc safe functions.

* Update nimbus/db/core_db/legacy_db.nim

Co-authored-by: Kim De Mey <kim.demey@gmail.com>

* Update nimbus/db/aristo/aristo_transcode.nim

Co-authored-by: Kim De Mey <kim.demey@gmail.com>

* Update nimbus/db/core_db/legacy_db.nim

Co-authored-by: Kim De Mey <kim.demey@gmail.com>

---------

Co-authored-by: Kim De Mey <kim.demey@gmail.com>
2023-09-26 10:21:13 +01:00
Jordan Hrycaj cd1d370543
Aristo db api extensions for use as core db backend (#1754)
* Update docu

* Update Aristo/Kvt constructor prototype

why:
  Previous version used an `enum` value to indicate what backend is to
  be used. This was replaced by using the backend object type.

* Rewrite `hikeUp()` return code into `Result[Hike,(Hike,AristoError)]`

why:
  Better code maintenance. Previously, the `Hike` object was returned. It
  had an internal error field so partial success was also available on
  a failure. This error field has been removed.

* Use `openArray[byte]` rather than `Blob` in functions prototypes

* Provide synchronised multi instance transactions

why:
  The `CoreDB` object was geared towards the legacy DB which used a single
  transaction for the key-value backend DB. Different state roots are
  provided by the backend database, so all instances work directly on the
  same backend.

  Aristo db instances have different in-memory mappings (aka different
  state roots) and the transactions are on top of there mappings. So each
  instance might run different transactions.

  Multi instance transactions are a compromise to converge towards the
  legacy behaviour. The synchronised transactions span over all instances
  available at the time when base transaction was opened. Instances
  created later are unaffected.

* Provide key-value pair database iterator

why:
  Needed in `CoreDB` for `replicate()` emulation

also:
  Some update of internal code

* Extend API (i.e. prototype variants)

why:
  Needed for `CoreDB` geared towards the legacy backend which has a more
  basic API than Aristo.
2023-09-15 16:23:53 +01:00
andri lim 56215ed83f
Bump stint to v2.0: new array backend (#1747)
* Bump stint to v2.0: new array backend
2023-09-13 09:32:38 +07:00
Jordan Hrycaj 8e00143313
Aristo db code massage n cosmetics (#1745)
* Rewrite remaining `AristoError` return code into `Result[void,AristoError]`

why:
  Better code maintenance

* Update import sections

* Update Aristo DB paths

why:
 More systematic so directory can be shared with other DB types

* More cosmetcs

* Update unit tests runners

why:
  Proper handling of persistent and mem-only DB. The latter can be
  consistently triggered by an empty DB path.
2023-09-12 19:45:12 +01:00
Jordan Hrycaj 8e46953390
Aristo db state root repos and reorg (#1744)
* Reorg of distributed backend access

details:
  Now handled via API provided in `aristo_desc`.

* Rename `checkCache()` => `checkTop()`

why:
  Better naming for top layer cache checker

also:
  Provide cascaded fifos checker

* Provide `eq` directive for finding filter by exact filter ID (think block number)

* Some code beautification (for better code reading)

* State root reposition and reorg

details:
  Repositioning is supported by forking a new descriptor. Reorg is then
  accomplished by writing this forked state on the backend database.
2023-09-11 21:38:49 +01:00
Jordan Hrycaj 070b06f809
Implement backend filter mechanics (#1730)
details:
* Tested features
  + Successively store filters with increasing filter ID (think block number)
  + Cascading through fifos, deeper fifos merge groups of filters
  + Fetch squash merged N top fifos
  + Delete N top fifos, push back merged fifo, continue storing
  + Fifo chain is verified by hashes and filter ID
* Not tested yet
  + Real live scenario (using data dumps)
  + Real filter data (only shallow filters used so far)
2023-09-05 19:00:40 +01:00
Jordan Hrycaj 3936d4d0ad
Aristo db fixes n updates needed for filter fifo (#1728)
* Set scheduler state as part of the backend descriptor

details:
  Moved type definitions `QidLayoutRef` and `QidSchedRef` to
 `desc_structural.nim` so that it shares the same folder as
  `desc_backend.nim`

* Automatic filter queue table initialisation in backend

details:
  Scheduler can be tweaked or completely disabled

* Updated backend unit tests

details:
+ some code clean up/beautification, reads better now
+ disabled persistent filters so that there is no automated filter
   management which will be implemented next

* Prettify/update unit tests source code

details:
  Mostly replacing the `check()` paradigm by `xCheck()`

* Somewhat simplified backend type management

why:
  Backend objects are labelled with a `BackendType` symbol where the
  `BackendVoid` label is implicitly assumed for a `nil` backend object
  reference.

  To make it easier, a `kind()` function is used now applicable to
  `nil` references as well.

* Fix DB storage layout for filter objects

why:
  Need to store the filter ID with the object

* Implement reverse [] index on fifo

why:
  An integer index argument on `[]` retrieves the QueueID (label) of the
  fifo item while a QueueID argument on `[]` retrieves the index (so
  it is inverse to the former variant).

* Provide iterator over filters as fifo

why:
  This iterator goes along the cascased fifo structure (i.e. in
  historical order)
2023-09-05 14:57:20 +01:00
Jordan Hrycaj 465d694834
Aristo db implement filter storage scheduler (#1713)
* Rename FilterID => QueueID

why:
  The current usage does not identify a particular filter but uses it as
  storage tag to manage it on the database (to be organised in a set of
  FIFOs or queues.)

* Split `aristo_filter` source into sub-files

why:
  Make space for filter management API

* Store filter queue IDs in pairs on the backend

why:
  Any pair will will describe a FIFO accessed by bottom/top IDs

* Reorg some source file names

why:
  The "aristo_" prefix for make local/private files is tedious to
  use, so removed.

* Implement filter slot scheduler

details:
  Filters will be stored on the database on cascaded FIFOs. When a FIFO
  queue is full, some filter items are bundled together and stored on the
  next FIFO.
2023-08-25 23:53:59 +01:00
Jordan Hrycaj 124ac064c6
Aristo db store filters on backend (#1703)
* Simplify RocksDB sub-tables iterator

* Implement `filter` storage on backend db

details:
  Unit tests working
2023-08-22 19:44:54 +01:00
Jordan Hrycaj b9a4fd3137
Aristo db update serialisation (#1700)
* Remove unused unit test sources

* Redefine and document serialised data records for Aristo backend

why:
  Unique record types determined by marker byte, i.e. the last byte of a
  serialisation record. This just needed some tweaking after adding new
  record types.
2023-08-21 19:18:06 +01:00
Jordan Hrycaj 4c9141ffac
Aristo db implement filter serialisation for storage (#1695)
* Remove concept of empty/blind filters

why:
  Not needed. A non-existent filter is is coded as a nil reference.

* Slightly generalised backend iterators

why:
 * VertexID as key for the ID generator state makes no sense
 * there will be more tables addressed by non-VertexID keys

* Store serialised/blobified vertices on memory backend

why:
  This is more in line with the RocksDB backend so more appropriate
  for testing when comparing behaviour. For a speedy memory database,
  a backend-less variant should be used.

* Drop the `Aristo` prefix from names `AristoLayerRef`, etc.

* Suppress compiler warning

why:
  duplicate imports

* Add filter serialisation transcoder

why:
  Will be used as storage format
2023-08-18 20:46:55 +01:00
Jordan Hrycaj 3078c207ca
Aristo db implement distributed backend access (#1688)
* Fix hashing algorithm

why:
  Particular case where a sub-tree is on the backend, linked by an
  Extension vertex to the top level.

* Update backend verification to report `dirty` top layer

* Implement distributed merge of backend filters

* Implement distributed backend access management

details:
  Implemented and tested as described in chapter 5 of the `README.md`
  file.
2023-08-17 14:42:01 +01:00
Jordan Hrycaj 01fe172738
Aristo db integrate hashify into tx (#1679)
* Renamed type `NoneBackendRef` => `VoidBackendRef`

* Clarify names: `BE=filter+backend` and `UBE=backend (unfiltered)`

why:
  Most functions used full names as `getVtxUnfilteredBackend()` or
  `getKeyBackend()`. After defining abbreviations (and its meaning) it
   seems easier to use `getVtxUBE()` and `getKeyBE()`.

* Integrate `hashify()` process into transaction logic

why:
  Is now transparent unless explicitly controlled.

details:
  Cache changes imply setting a `dirty` flag which in turn triggers
  `hashify()` processing in transaction and `pack()` directives.

* Removed `aristo_tx.exec()` directive

why:
  Inconsistent implementation, functionality will be provided with a
  different paradigm.
2023-08-11 18:23:57 +01:00
Jordan Hrycaj 09fabd04eb
Aristo db use filter betw backend and tx cache (#1678)
* Provide deep copy for each transaction layer

why:
  Localising changes. Selective deep copy was just overlooked.

* Generalise vertex ID generator state reorg function `vidReorg()`

why:
  makes it somewhat easier to handle when saving layers.

* Provide dummy back end descriptor `NoneBackendRef`

* Optional read-only filter between backend and transaction cache

why:
  Some staging area for accumulating changes to the backend DB. This
  will eventually be an access layer for emulating a backend with
  multiple/historic state roots.

* Re-factor `persistent()` with filter between backend/tx-cache => `stow()`

why:
  The filter provides an abstraction from the physically stored data on
  disk. So, there can be several MPT instances using the same disk data
  with different state roots. Of course, all the MPT instances should
  not differ too much for practical reasons :).

TODO:
  Filter administration tools need to be provided.
2023-08-10 21:01:28 +01:00
Jordan Hrycaj 71c91e2280
Aristo db refactor tx paradim (#1674)
* Better error handling

why:
  Bail out on some error as early as possible before any changes.

* Implement `fetch()` as opposite of `merge()`

rationale:
  In the `Aristo` realm, the action named `fetch()` and `merge()` indicate
  leaf value related actions on the MPT, while actions `get()` and `put()`
   handle vertex or hash key related operations that constitute the MPT.

* Re-factor `merge()` prototypes

why:
  The most used variant of `merge()` should have the simplest prototype.

* Persistent DB constructor needs to import `aristo/aristo_init/persistent`

why:
  Most applications use memory DB anyway. This avoids linking `-lrocksdb`
  or any other back end libraries by default.

* Re-factor transaction module

why:
  Got the paradigm wrong. The transaction descriptor did replace the
  database one but should be handled separately.
2023-08-07 18:45:23 +01:00
Jordan Hrycaj 56d5c382d7
Aristo db traversal helpers (#1638)
* Misc fixes

detail:
* Fix de-serialisation for account leafs
* Update node recovery from unit tests

* Remove `LegacyAccount` from `PayloadRef` object

why:
  Legacy accounts use a hash key as storage root which is detrimental
  to the working of the Aristo database which uses a vertex ID.

* Dissolve `hashify_helper` into `aristo_utils` and `aristo_transcode`

why:
  Functions are of general interest so they should live in first level
  code files.

* Added left/right iterators over leaf nodes

* Some helper/wrapper functions that might be useful
2023-07-13 00:03:14 +01:00
Jordan Hrycaj 93a72025a1
Extended data Payload specs for the backend. (#1630)
why:
  For the main tree with root vertex ID 1, the leaf nodes hold the
  account data. These accounts may link to sub trees the storage root
  node ID of which must be registered here. There is no reverse key
  lookup on the backend.

note:
  These definitions are experimental. Also, there are some tests missing
  for validating Payload data conversions.
2023-07-05 21:27:48 +01:00
Jordan Hrycaj ccf639fc3c
Aristo db transaction based interface (#1628)
* Provide transaction based interface for standard operations

* Provide unit tests for new Aristo interface using transactions

details:
  These new tests combine and replace several single-purpose tests.
  The now unused test sources will be kept for a while to be eventually
  removed.
2023-07-05 14:50:11 +01:00
Jordan Hrycaj ff6673beac
Aristo db tidy up a bit (#1625)
* Slightly tighten some self-check conditions

* Redefined the database descriptor object as reference (to the object)

why:
  The upcoming transaction wrapper will work with a database reference
  rather than the object itself

* Append state before `save()` to the Aristo descriptor

why:
  This stae was previously returned by the function. Appending it to
  a field of the Aristo descriptor seems easier to handle.
2023-07-04 19:24:03 +01:00
Jordan Hrycaj dd1c8ed6f2
Aristo db update delete functionality (#1621)
* Fix missing branch checks in transcoder

why:
  Symmetry problem. `Blobify()` allowed for encoding degenerate branch
  vertices while `Deblobify()` rejected decoding wrongly encoded data.

* Update memory backend so that it rejects storing bogus vertices.

why:
  Error behaviour made similar to the rocks DB backend.

* Make sure that leaf vertex IDs are not repurposed

why:
  This makes it easier to record leaf node changes

* Update error return code for next()/right() traversal

why:
  Returning offending vertex ID (besides error code) helps debugging

* Update Merkle hasher for deleted nodes

why:
  Not implemented, yet

also:
  Provide cache & backend consistency check functions. This was
  partly re-implemented from `hashifyCheck()`

* Simplify some unit tests

* Fix delete function

why:
  Was conceptually wrong
2023-06-30 23:22:33 +01:00
Jordan Hrycaj 15cc9f962e
Aristo db update vertex caching when merging (#1606)
* Added missing deferred cleanup directive to sub-test functions

why:
  Rocksdb keeps the files locked for a short while leading to errors. This
  was previously solved my using different db sub-directories

* Provide vertex deep-copy function globally.

why:
  is just handy

* Avoid unnecessary vertex caching when merging proof nodes

also:
  Run all merge tests on the rocksdb backend
  Previously, proof node tests were run without backend
2023-06-22 20:21:33 +01:00
Jordan Hrycaj 83dbe87159
Aristo db update foreground caching (#1605)
* Fix vertex ID generator state handling for rocksdb backend

why:
 * Key error in walk iterator
 * Needs to be loaded when opening the database

* Use non-zero sub-table prefixes for rocksdb

why:
  Handy for debugging

* Fix error code for missing key on rocksdb backend

why:
  Previously returned `VOID_HASH_KEY` rather than `GetKeyNotFound`

* Explicitly copy vertex data between internal table and function/result argument

why:
  Function argument or return reference may still refer to the same data
  object.

* Updated error symbols

why:
  Error symbol names for the hike module now start with the prefix `Hike`.

* Write back modified branch node into local top layer cache

why:
  With the backend available, the source of the branch node references
  might not be the top layer cache. So any change must be explicitely
  recorded.
2023-06-22 12:13:24 +01:00
Jordan Hrycaj 4b66f93274
Aristo db with storage backends (#1603)
* Generalised Aristo DB constructor for any type of backend

details:
  * Records to be deleted are represented as key-void (rather than
    key-value) pairs by the put-function arguments
  * Allow direct driver access, iterators as example implementation and
    for testing.

* Provide backend storage interface

details:
  Stores the top layer onto backend tables

* Implemented Rocks DB backend

details:
  Transaction based `put()` functionality
  Iterators (based on direct RocksDB access)
2023-06-20 14:26:25 +01:00
Jordan Hrycaj d7f40516a7
Detach from snap/sync declarations & definitions (#1601)
why:
  Tests and some basic components were originally borrowed from the
  snap/sync implementation. These have fully been re-implemented.
2023-06-12 19:16:03 +01:00