nim-dagger/codex/erasure/erasure.nim

462 lines
13 KiB
Nim

## Nim-Codex
## Copyright (c) 2022 Status Research & Development GmbH
## Licensed under either of
## * Apache License, version 2.0, ([LICENSE-APACHE](LICENSE-APACHE))
## * MIT license ([LICENSE-MIT](LICENSE-MIT))
## at your option.
## This file may not be copied, modified, or distributed except according to
## those terms.
import pkg/upraises
push: {.upraises: [].}
import std/sequtils
import std/options
import pkg/chronos
import pkg/chronicles
import pkg/questionable
import ../manifest
import ../stores
import ../blocktype as bt
import ./backend
export backend
logScope:
topics = "codex erasure"
type
## Encode a manifest into one that is erasure protected.
##
## The new manifest has K `blocks` that are encoded into
## additional M `parity` blocks. The resulting dataset
## is padded with empty blocks if it doesn't have a square
## shape.
##
## NOTE: The padding blocks could be excluded
## from transmission, but they aren't for now.
##
## The resulting dataset is logically divided into rows
## where a row is made up of B blocks. There are then,
## K + M = N rows in total, each of length B blocks. Rows
## are assumed to be of the same number of (B) blocks.
##
## The encoding is systematic and the rows can be
## read sequentially by any node without decoding.
##
## Decoding is possible with any K rows or partial K
## columns (with up to M blocks missing per column),
## or any combination there of.
##
EncoderProvider* = proc(size, blocks, parity: int): EncoderBackend
{.raises: [Defect], noSideEffect.}
DecoderProvider* = proc(size, blocks, parity: int): DecoderBackend
{.raises: [Defect], noSideEffect.}
Erasure* = ref object
encoderProvider*: EncoderProvider
decoderProvider*: DecoderProvider
store*: BlockStore
GetNext = proc(): Future[?(bt.Block, int)] {.upraises: [], gcsafe, closure.}
PendingBlocksIter* = ref object
finished*: bool
next*: GetNext
func indexToPos(self: Erasure, encoded: Manifest, idx, step: int): int {.inline.} =
## Convert an index to a position in the encoded
## dataset
## `idx` - the index to convert
## `step` - the current step
## `pos` - the position in the encoded dataset
##
(idx - step) div encoded.steps
iterator items*(blocks: PendingBlocksIter): Future[?(bt.Block, int)] =
while not blocks.finished:
yield blocks.next()
proc getPendingBlocks(
self: Erasure,
manifest: Manifest,
start, stop, steps: int): ?!PendingBlocksIter =
## Get pending blocks iterator
##
var
# calculate block indexes to retrieve
blockIdx = toSeq(countup(start, stop, steps))
# request all blocks from the store
pendingBlocks = blockIdx.mapIt(
self.store.getBlock(manifest[it]) # Get the data blocks (first K)
)
indices = pendingBlocks # needed so we can track the block indices
iter = PendingBlocksIter(finished: false)
trace "Requesting blocks", pendingBlocks = pendingBlocks.len
proc next(): Future[?(bt.Block, int)] {.async.} =
if iter.finished:
trace "No more blocks"
return none (bt.Block, int)
if pendingBlocks.len == 0:
iter.finished = true
trace "No more blocks - finished"
return none (bt.Block, int)
let
done = await one(pendingBlocks)
idx = indices.find(done)
logScope:
idx = idx
blockIdx = blockIdx[idx]
manifest = manifest[blockIdx[idx]]
pendingBlocks.del(pendingBlocks.find(done))
without blk =? (await done), error:
trace "Failed retrieving block", err = $error.msg
return none (bt.Block, int)
trace "Retrieved block"
some (blk, blockIdx[idx])
iter.next = next
success iter
proc prepareEncodingData(
self: Erasure,
encoded: Manifest,
step: int,
data: ref seq[seq[byte]],
emptyBlock: seq[byte]): Future[?!int] {.async.} =
## Prepare data for encoding
##
without pendingBlocksIter =?
self.getPendingBlocks(
encoded,
step,
encoded.rounded - 1, encoded.steps), err:
trace "Unable to get pending blocks", error = err.msg
return failure(err)
var resolved = 0
for blkFut in pendingBlocksIter:
if (blk, idx) =? (await blkFut):
let
pos = self.indexToPos(encoded, idx, step)
if blk.isEmpty:
trace "Padding with empty block", idx
shallowCopy(data[pos], emptyBlock)
else:
trace "Encoding block", cid = blk.cid, idx
shallowCopy(data[pos], blk.data)
resolved.inc()
success resolved
proc prepareDecodingData(
self: Erasure,
encoded: Manifest,
step: int,
data: ref seq[seq[byte]],
parityData: ref seq[seq[byte]],
emptyBlock: seq[byte]): Future[?!(int, int)] {.async.} =
## Prepare data for decoding
## `encoded` - the encoded manifest
## `step` - the current step
## `data` - the data to be prepared
## `parityData` - the parityData to be prepared
## `emptyBlock` - the empty block to be used for padding
##
without pendingBlocksIter =?
self.getPendingBlocks(
encoded,
step,
encoded.len - 1, encoded.steps), err:
trace "Unable to get pending blocks", error = err.msg
return failure(err)
var
dataPieces = 0
parityPieces = 0
resolved = 0
for blkFut in pendingBlocksIter:
# Continue to receive blocks until we have just enough for decoding
# or no more blocks can arrive
if resolved >= encoded.ecK:
break
if (blk, idx) =? (await blkFut):
let
pos = self.indexToPos(encoded, idx, step)
logScope:
cid = blk.cid
idx = idx
pos = pos
step = step
empty = blk.isEmpty
if idx >= encoded.rounded:
trace "Retrieved parity block"
shallowCopy(parityData[pos - encoded.ecK], if blk.isEmpty: emptyBlock else: blk.data)
parityPieces.inc
else:
trace "Retrieved data block"
shallowCopy(data[pos], if blk.isEmpty: emptyBlock else: blk.data)
dataPieces.inc
resolved.inc
return success (dataPieces, parityPieces)
proc prepareManifest(
self: Erasure,
manifest: Manifest,
blocks: int,
parity: int): ?!Manifest =
logScope:
original_cid = manifest.cid.get()
original_len = manifest.len
blocks = blocks
parity = parity
if blocks > manifest.len:
trace "Unable to encode manifest, not enough blocks", blocks = blocks, len = manifest.len
return failure("Not enough blocks to encode")
trace "Preparing erasure coded manifest", blocks, parity
without var encoded =? Manifest.new(manifest, blocks, parity), error:
trace "Unable to create manifest", msg = error.msg
return error.failure
logScope:
steps = encoded.steps
rounded_blocks = encoded.rounded
new_manifest = encoded.len
trace "Erasure coded manifest prepared"
success encoded
proc encodeData(
self: Erasure,
manifest: Manifest): Future[?!void] {.async.} =
## Encode blocks pointed to by the protected manifest
##
## `manifest` - the manifest to encode
##
var
encoded = manifest
logScope:
steps = encoded.steps
rounded_blocks = encoded.rounded
new_manifest = encoded.len
protected = encoded.protected
ecK = encoded.ecK
ecM = encoded.ecM
if not encoded.protected:
trace "Manifest is not erasure protected"
return failure("Manifest is not erasure protected")
var
encoder = self.encoderProvider(encoded.blockSize.int, encoded.ecK, encoded.ecM)
emptyBlock = newSeq[byte](encoded.blockSize.int)
try:
for step in 0..<encoded.steps:
# TODO: Don't allocate a new seq every time, allocate once and zero out
var
data = seq[seq[byte]].new() # number of blocks to encode
parityData = newSeqWith[seq[byte]](encoded.ecM, newSeq[byte](encoded.blockSize.int))
data[].setLen(encoded.ecK)
# TODO: this is a tight blocking loop so we sleep here to allow
# other events to be processed, this should be addressed
# by threading
await sleepAsync(10.millis)
without resolved =?
(await self.prepareEncodingData(encoded, step, data, emptyBlock)), err:
trace "Unable to prepare data", error = err.msg
return failure(err)
trace "Erasure coding data", data = data[].len, parity = parityData.len
if (
let res = encoder.encode(data[], parityData);
res.isErr):
trace "Unable to encode manifest!", error = $res.error
return res.mapFailure
var idx = encoded.rounded + step
for j in 0..<encoded.ecM:
without blk =? bt.Block.new(parityData[j]), error:
trace "Unable to create parity block", err = error.msg
return failure(error)
trace "Adding parity block", cid = blk.cid, idx
encoded[idx] = blk.cid
if isErr (await self.store.putBlock(blk)):
trace "Unable to store block!", cid = blk.cid
return failure("Unable to store block!")
idx.inc(encoded.steps)
except CancelledError as exc:
trace "Erasure coding encoding cancelled"
raise exc # cancellation needs to be propagated
except CatchableError as exc:
trace "Erasure coding encoding error", exc = exc.msg
return failure(exc)
finally:
encoder.release()
return success()
proc encode*(
self: Erasure,
manifest: Manifest,
blocks: int,
parity: int): Future[?!Manifest] {.async.} =
## Encode a manifest into one that is erasure protected.
##
## `manifest` - the original manifest to be encoded
## `blocks` - the number of blocks to be encoded - K
## `parity` - the number of parity blocks to generate - M
##
without var encoded =? self.prepareManifest(manifest, blocks, parity), error:
trace "Unable to prepare manifest", error = error.msg
return failure error
if err =? (await self.encodeData(encoded)).errorOption:
trace "Unable to encode data", error = err.msg
return failure err
return success encoded
proc decode*(
self: Erasure,
encoded: Manifest,
all = true): Future[?!Manifest] {.async.} =
## Decode a protected manifest into it's original
## manifest
##
## `encoded` - the encoded (protected) manifest to
## be recovered
## `all` - if true, all blocks will be recovered,
## including parity
##
logScope:
steps = encoded.steps
rounded_blocks = encoded.rounded
new_manifest = encoded.len
protected = encoded.protected
ecK = encoded.ecK
ecM = encoded.ecM
if not encoded.protected:
trace "Manifest is not erasure protected"
return failure "Manifest is not erasure protected"
var
decoder = self.decoderProvider(encoded.blockSize.int, encoded.ecK, encoded.ecM)
emptyBlock = newSeq[byte](encoded.blockSize.int)
hasParity = false
trace "Decoding erasure coded manifest"
try:
for step in 0..<encoded.steps:
# TODO: this is a tight blocking loop so we sleep here to allow
# other events to be processed, this should be addressed
# by threading
await sleepAsync(10.millis)
var
data = seq[seq[byte]].new()
# newSeq[seq[byte]](encoded.ecK) # number of blocks to encode
parityData = seq[seq[byte]].new()
recovered = newSeqWith[seq[byte]](encoded.ecK, newSeq[byte](encoded.blockSize.int))
resolved = 0
data[].setLen(encoded.ecK) # set len to K
parityData[].setLen(encoded.ecM) # set len to M
without (dataPieces, parityPieces) =?
(await self.prepareDecodingData(encoded, step, data, parityData, emptyBlock)), err:
trace "Unable to prepare data", error = err.msg
return failure(err)
if dataPieces >= encoded.ecK:
trace "Retrieved all the required data blocks"
continue
trace "Erasure decoding data"
if (
let err = decoder.decode(data[], parityData[], recovered);
err.isErr):
trace "Unable to decode data!", err = $err.error
return failure($err.error)
for i in 0..<encoded.ecK:
if data[i].len <= 0 and not encoded.blocks[i].isEmpty:
without blk =? bt.Block.new(recovered[i]), error:
trace "Unable to create block!", exc = error.msg
return failure(error)
doAssert blk.cid in encoded.blocks,
"Recovered block not in original manifest"
trace "Recovered block", cid = blk.cid, index = i
if isErr (await self.store.putBlock(blk)):
trace "Unable to store block!", cid = blk.cid
return failure("Unable to store block!")
except CancelledError as exc:
trace "Erasure coding decoding cancelled"
raise exc # cancellation needs to be propagated
except CatchableError as exc:
trace "Erasure coding decoding error", exc = exc.msg
return failure(exc)
finally:
decoder.release()
without decoded =? Manifest.new(blocks = encoded.blocks[0..<encoded.originalLen]), error:
return error.failure
return decoded.success
proc start*(self: Erasure) {.async.} =
return
proc stop*(self: Erasure) {.async.} =
return
proc new*(
T: type Erasure,
store: BlockStore,
encoderProvider: EncoderProvider,
decoderProvider: DecoderProvider
): Erasure =
## Create a new Erasure instance for encoding and decoding manifests
Erasure(
store: store,
encoderProvider: encoderProvider,
decoderProvider: decoderProvider)