68 lines
2.8 KiB
Python
68 lines
2.8 KiB
Python
import json
|
|
from unittest.mock import patch
|
|
|
|
from crc import db, session
|
|
from crc.api.common import ApiError
|
|
from crc.models.file import FileDataModel, FileModel
|
|
from crc.models.protocol_builder import ProtocolBuilderRequiredDocumentSchema
|
|
from crc.models.study import StudyModel
|
|
from crc.scripts.study_info import StudyInfo
|
|
from crc.services.file_service import FileService
|
|
from crc.services.study_service import StudyService
|
|
from crc.services.workflow_processor import WorkflowProcessor
|
|
from tests.base_test import BaseTest
|
|
|
|
|
|
class TestStudyDetailsDocumentsScript(BaseTest):
|
|
test_uid = "dhf8r"
|
|
test_study_id = 1
|
|
|
|
"""
|
|
1. get a list of all documents related to the study.
|
|
2. For this study, is this document required accroding to the protocol builder?
|
|
3. For ALL uploaded documents, what the total number of files that were uploaded? per instance of this document naming
|
|
convention that we are implementing for the IRB.
|
|
"""
|
|
|
|
def test_validate_returns_error_if_reference_files_do_not_exist(self):
|
|
self.load_example_data()
|
|
self.create_reference_document()
|
|
study = session.query(StudyModel).first()
|
|
workflow_spec_model = self.load_test_spec("two_forms")
|
|
workflow_model = StudyService._create_workflow_model(study, workflow_spec_model)
|
|
processor = WorkflowProcessor(workflow_model)
|
|
task = processor.next_task()
|
|
|
|
# Remove the reference file.
|
|
file_model = db.session.query(FileModel). \
|
|
filter(FileModel.is_reference == True). \
|
|
filter(FileModel.name == FileService.IRB_PRO_CATEGORIES_FILE).first()
|
|
if file_model:
|
|
db.session.query(FileDataModel).filter(FileDataModel.file_model_id == file_model.id).delete()
|
|
db.session.query(FileModel).filter(FileModel.id == file_model.id).delete()
|
|
db.session.commit()
|
|
db.session.flush()
|
|
|
|
with self.assertRaises(ApiError):
|
|
StudyInfo().do_task_validate_only(task, study.id, "documents")
|
|
|
|
def test_no_validation_error_when_correct_file_exists(self):
|
|
self.load_example_data()
|
|
self.create_reference_document()
|
|
study = session.query(StudyModel).first()
|
|
workflow_spec_model = self.load_test_spec("two_forms")
|
|
workflow_model = StudyService._create_workflow_model(study, workflow_spec_model)
|
|
processor = WorkflowProcessor(workflow_model)
|
|
task = processor.next_task()
|
|
StudyInfo().do_task_validate_only(task, study.id, "documents")
|
|
|
|
def test_load_lookup_data(self):
|
|
self.create_reference_document()
|
|
dict = FileService.get_file_reference_dictionary()
|
|
self.assertIsNotNone(dict)
|
|
|
|
def get_required_docs(self):
|
|
string_data = self.protocol_builder_response('required_docs.json')
|
|
return ProtocolBuilderRequiredDocumentSchema(many=True).loads(string_data)
|
|
|