Dan Funk f4342fc785 It became impossible to use the Swagger ui when we started adding authentication to all of the calls. I discovered Connexion and Swagger have a default way of handing JTW authentication and this cleans up our code quite a bit, moves the securing of endpoints into the API Definition, which is quite nice, and removes a whole library dependency (I never get to do that!) I added a SWAGGER_AUTH_KEY that can be used in non-production environments to allow users to quickly authenticate from the Swagger ui. I also removed all api calls to simple little happy api services, because that is just mean and pointless.		2020-03-24 14:15:21 -04:00
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__init__.py	Refactor models into seperate directories	2019-12-31 16:32:47 -05:00
api_models.py	Revert "Merge remote-tracking branch 'origin/feature/reference_files' into feature/workflow_spec_categories"	2020-03-18 17:05:13 -04:00
file.py	Merge remote-tracking branch 'origin/master' into feature/reference_files	2020-03-20 11:07:55 -04:00
protocol_builder.py	Removing the doc_types from the protocol builder, as these will eventually contradict what is coming from IRB and should not be used as an reference. Also fixing a failing test and assuring that only one reference file ever exists with a given name.	2020-03-19 10:40:07 -04:00
stats.py	Resolves marshmallow_sqlalchemy.ModelSchema deprecation warning	2020-03-16 13:37:31 -04:00
study.py	Resolves marshmallow_sqlalchemy.ModelSchema deprecation warning	2020-03-16 13:37:31 -04:00
user.py	It became impossible to use the Swagger ui when we started adding authentication to all of the calls. I discovered Connexion and Swagger have a default way of handing JTW authentication and this cleans up our code quite a bit, moves the securing of endpoints into the API Definition, which is quite nice, and removes a whole library dependency (I never get to do that!) I added a SWAGGER_AUTH_KEY that can be used in non-production environments to allow users to quickly authenticate from the Swagger ui. I also removed all api calls to simple little happy api services, because that is just mean and pointless.	2020-03-24 14:15:21 -04:00
workflow.py	Fixing failed tests, setting unknown=EXCLUDE on the workflow spec model schema so that it can handle getting back the dump-only workflow_spec_category and just ignore it.	2020-03-20 07:54:01 -04:00