85 lines
4.0 KiB
Python
85 lines
4.0 KiB
Python
import json
|
|
from unittest.mock import patch
|
|
|
|
from crc import db
|
|
from crc.models.protocol_builder import ProtocolBuilderStatus
|
|
from crc.models.study import StudyModel
|
|
from crc.models.user import UserModel
|
|
from crc.models.workflow import WorkflowModel, WorkflowStatus, \
|
|
WorkflowSpecCategoryModel
|
|
from crc.services.study_service import StudyService
|
|
from crc.services.workflow_processor import WorkflowProcessor
|
|
from example_data import ExampleDataLoader
|
|
from tests.base_test import BaseTest
|
|
|
|
|
|
class TestStudyService(BaseTest):
|
|
"""Largely tested via the test_study_api, and time is tight, but adding new tests here."""
|
|
|
|
@patch('crc.services.protocol_builder.ProtocolBuilderService.get_required_docs') # mock_docs
|
|
def test_total_tasks_updated(self, mock_docs):
|
|
"""Assure that as a users progress is available when getting a list of studies for that user."""
|
|
|
|
docs_response = self.protocol_builder_response('required_docs.json')
|
|
mock_docs.return_value = json.loads(docs_response)
|
|
|
|
# Assure some basic models are in place, This is a damn mess. Our database models need an overhaul to make
|
|
# this easier - better relationship modeling is now critical.
|
|
self.load_test_spec("top_level_workflow", master_spec=True)
|
|
user = UserModel(uid="dhf8r", email_address="whatever@stuff.com", display_name="Stayathome Smellalots")
|
|
db.session.add(user)
|
|
db.session.commit()
|
|
study = StudyModel(title="My title", protocol_builder_status=ProtocolBuilderStatus.ACTIVE, user_uid=user.uid)
|
|
cat = WorkflowSpecCategoryModel(name="approvals", display_name="Approvals", display_order=0)
|
|
db.session.add_all([study, cat])
|
|
db.session.commit()
|
|
|
|
self.assertIsNotNone(cat.id)
|
|
self.load_test_spec("random_fact", category_id=cat.id)
|
|
|
|
self.assertIsNotNone(study.id)
|
|
workflow = WorkflowModel(workflow_spec_id="random_fact", study_id=study.id, status=WorkflowStatus.not_started)
|
|
db.session.add(workflow)
|
|
db.session.commit()
|
|
# Assure there is a master specification, one standard spec, and lookup tables.
|
|
ExampleDataLoader().load_reference_documents()
|
|
|
|
# The load example data script should set us up a user and at least one study, one category, and one workflow.
|
|
studies = StudyService.get_studies_for_user(user)
|
|
self.assertTrue(len(studies) == 1)
|
|
self.assertTrue(len(studies[0].categories) == 1)
|
|
self.assertTrue(len(studies[0].categories[0].workflows) == 1)
|
|
|
|
workflow = next(iter(studies[0].categories[0].workflows)) # Workflows is a set.
|
|
|
|
# workflow should not be started, and it should have 0 completed tasks, and 0 total tasks.
|
|
self.assertEqual(WorkflowStatus.not_started, workflow.status)
|
|
self.assertEqual(None, workflow.spec_version)
|
|
self.assertEqual(0, workflow.total_tasks)
|
|
self.assertEqual(0, workflow.completed_tasks)
|
|
|
|
# Initialize the Workflow with the workflow processor.
|
|
workflow_model = db.session.query(WorkflowModel).filter(WorkflowModel.id == workflow.id).first()
|
|
processor = WorkflowProcessor(workflow_model)
|
|
|
|
# Assure the workflow is now started, and knows the total and completed tasks.
|
|
studies = StudyService.get_studies_for_user(user)
|
|
workflow = next(iter(studies[0].categories[0].workflows)) # Workflows is a set.
|
|
# self.assertEqual(WorkflowStatus.user_input_required, workflow.status)
|
|
self.assertTrue(workflow.total_tasks > 0)
|
|
self.assertEqual(0, workflow.completed_tasks)
|
|
self.assertIsNotNone(workflow.spec_version)
|
|
|
|
# Complete a task
|
|
task = processor.next_task()
|
|
processor.complete_task(task)
|
|
|
|
# Assure the workflow has moved on to the next task.
|
|
studies = StudyService.get_studies_for_user(user)
|
|
workflow = next(iter(studies[0].categories[0].workflows)) # Workflows is a set.
|
|
self.assertEqual(1, workflow.completed_tasks)
|
|
|
|
# Get approvals
|
|
approvals = StudyService.get_approvals(studies[0].id)
|
|
self.assertGreater(len(approvals), 0)
|