80 lines
3.8 KiB
Python
80 lines
3.8 KiB
Python
from tests.base_test import BaseTest
|
|
from crc.scripts.study_info import StudyInfo
|
|
from crc import app
|
|
from unittest.mock import patch
|
|
from crc.services.protocol_builder import ProtocolBuilderService
|
|
|
|
|
|
class TestStudyInfoScript(BaseTest):
|
|
|
|
test_uid = "dhf8r"
|
|
test_study_id = 1
|
|
|
|
def do_work(self, info_type):
|
|
app.config['PB_ENABLED'] = True
|
|
self.load_example_data()
|
|
workflow = self.create_workflow('study_info_script')
|
|
workflow_api = self.get_workflow_api(workflow)
|
|
# grab study_info directly from script
|
|
study_info = StudyInfo().do_task(workflow_api.study_id, workflow.study.id, workflow.id, info_type)
|
|
|
|
# grab study info through a workflow
|
|
first_task = workflow_api.next_task
|
|
self.complete_form(workflow, first_task, {'which': info_type})
|
|
workflow_api = self.get_workflow_api(workflow)
|
|
second_task = workflow_api.next_task
|
|
|
|
return study_info, second_task
|
|
|
|
def test_info_script_info(self):
|
|
study_info, second_task = self.do_work(info_type='info')
|
|
|
|
self.assertEqual(study_info['title'], second_task.data['info']['title'])
|
|
self.assertEqual(study_info['primary_investigator_id'], second_task.data['info']['primary_investigator_id'])
|
|
self.assertIn(study_info['title'], second_task.documentation)
|
|
|
|
@patch('crc.services.protocol_builder.requests.get')
|
|
def test_info_script_investigators(self, mock_get):
|
|
app.config['PB_ENABLED'] = True
|
|
mock_get.return_value.ok = True
|
|
mock_get.return_value.text = self.protocol_builder_response('investigators.json')
|
|
response = ProtocolBuilderService.get_investigators(self.test_study_id)
|
|
study_info, second_task = self.do_work(info_type='investigators')
|
|
for i in range(len(response)):
|
|
r = response[i]
|
|
s = second_task.data['info'][response[i]['INVESTIGATORTYPE']]
|
|
self.assertEqual(r['INVESTIGATORTYPEFULL'], s['label'])
|
|
|
|
# def test_info_script_roles(self):
|
|
# study_info, second_task = self.do_work(info_type='roles')
|
|
# self.assertEqual(study_info, second_task.data['info'])
|
|
|
|
@patch('crc.services.protocol_builder.requests.get')
|
|
def test_info_script_details(self, mock_get):
|
|
app.config['PB_ENABLED'] = True
|
|
mock_get.return_value.ok = True
|
|
mock_get.return_value.text = self.protocol_builder_response('study_details.json')
|
|
response = ProtocolBuilderService.get_study_details(self.test_study_id)
|
|
study_info, second_task = self.do_work(info_type='details')
|
|
self.assertEqual(response['IBC_NUMBER'], second_task.data['info']['IBC_NUMBER'])
|
|
self.assertEqual(response['IDE'], second_task.data['info']['IDE'])
|
|
self.assertEqual(response['IND_1'], second_task.data['info']['IND_1'])
|
|
self.assertEqual(response['IND_2'], second_task.data['info']['IND_2'])
|
|
self.assertEqual(response['IND_3'], second_task.data['info']['IND_3'])
|
|
|
|
# def test_info_script_documents(self):
|
|
# study_info, second_task = self.do_work(info_type='documents')
|
|
# self.assertEqual(study_info, second_task.data['info'])
|
|
|
|
@patch('crc.services.protocol_builder.requests.get')
|
|
def test_info_script_sponsors(self, mock_get):
|
|
app.config['PB_ENABLED'] = True
|
|
mock_get.return_value.ok = True
|
|
mock_get.return_value.text = self.protocol_builder_response('sponsors.json')
|
|
response = ProtocolBuilderService.get_sponsors(self.test_study_id)
|
|
study_info, second_task = self.do_work(info_type='sponsors')
|
|
for i in range(len(response)):
|
|
self.assertEqual(response[i]['SPONSOR_ID'], second_task.data['info'][i]['SPONSOR_ID'])
|
|
self.assertEqual(response[i]['SP_NAME'], second_task.data['info'][i]['SP_NAME'])
|
|
self.assertEqual(response[i]['SS_STUDY'], second_task.data['info'][i]['SS_STUDY'])
|