import json from unittest.mock import patch from tests.base_test import BaseTest from crc import session, app from crc.api.common import ApiErrorSchema from crc.models.protocol_builder import ProtocolBuilderStudySchema from crc.models.workflow import WorkflowSpecModel from crc.services.workflow_service import WorkflowService class TestWorkflowSpecValidation(BaseTest): def validate_workflow(self, workflow_name): spec_model = self.load_test_spec(workflow_name) rv = self.app.get('/v1.0/workflow-specification/%s/validate' % spec_model.id, headers=self.logged_in_headers()) self.assert_success(rv) json_data = json.loads(rv.get_data(as_text=True)) return ApiErrorSchema(many=True).load(json_data) def test_successful_validation_of_test_workflows(self): app.config['PB_ENABLED'] = False # Assure this is disabled. self.load_example_data() self.assertEqual(0, len(self.validate_workflow("parallel_tasks"))) self.assertEqual(0, len(self.validate_workflow("decision_table"))) self.assertEqual(0, len(self.validate_workflow("docx"))) self.assertEqual(0, len(self.validate_workflow("exclusive_gateway"))) self.assertEqual(0, len(self.validate_workflow("file_upload_form"))) self.assertEqual(0, len(self.validate_workflow("random_fact"))) self.assertEqual(0, len(self.validate_workflow("study_details"))) self.assertEqual(0, len(self.validate_workflow("two_forms"))) @patch('crc.services.protocol_builder.ProtocolBuilderService.get_investigators') # mock_studies @patch('crc.services.protocol_builder.ProtocolBuilderService.get_required_docs') # mock_docs @patch('crc.services.protocol_builder.ProtocolBuilderService.get_study_details') # mock_details @patch('crc.services.protocol_builder.ProtocolBuilderService.get_studies') # mock_studies def test_successful_validation_of_crc_workflows(self, mock_studies, mock_details, mock_docs, mock_investigators): # Mock Protocol Builder responses studies_response = self.protocol_builder_response('user_studies.json') mock_studies.return_value = ProtocolBuilderStudySchema(many=True).loads(studies_response) details_response = self.protocol_builder_response('study_details.json') mock_details.return_value = json.loads(details_response) docs_response = self.protocol_builder_response('required_docs.json') mock_docs.return_value = json.loads(docs_response) investigators_response = self.protocol_builder_response('investigators.json') mock_investigators.return_value = json.loads(investigators_response) self.load_example_data(use_crc_data=True) app.config['PB_ENABLED'] = True self.validate_all_loaded_workflows() def test_successful_validation_of_rrt_workflows(self): self.load_example_data(use_rrt_data=True) self.validate_all_loaded_workflows() def validate_all_loaded_workflows(self): workflows = session.query(WorkflowSpecModel).all() errors = [] for w in workflows: rv = self.app.get('/v1.0/workflow-specification/%s/validate' % w.id, headers=self.logged_in_headers()) self.assert_success(rv) json_data = json.loads(rv.get_data(as_text=True)) errors.extend(ApiErrorSchema(many=True).load(json_data)) self.assertEqual(0, len(errors), json.dumps(errors)) def test_invalid_expression(self): self.load_example_data() errors = self.validate_workflow("invalid_expression") self.assertEqual(2, len(errors)) self.assertEqual("workflow_validation_exception", errors[0]['code']) self.assertEqual("ExclusiveGateway_003amsm", errors[0]['task_id']) self.assertEqual("Has Bananas Gateway", errors[0]['task_name']) self.assertEqual("invalid_expression.bpmn", errors[0]['file_name']) self.assertEqual('When populating all fields ... ExclusiveGateway_003amsm: Error evaluating expression \'this_value_does_not_exist==true\', ' 'name \'this_value_does_not_exist\' is not defined', errors[0]["message"]) self.assertIsNotNone(errors[0]['task_data']) self.assertIn("has_bananas", errors[0]['task_data']) def test_validation_error(self): self.load_example_data() errors = self.validate_workflow("invalid_spec") self.assertEqual(2, len(errors)) self.assertEqual("workflow_validation_error", errors[0]['code']) self.assertEqual("StartEvent_1", errors[0]['task_id']) self.assertEqual("invalid_spec.bpmn", errors[0]['file_name']) def test_invalid_script(self): self.load_example_data() errors = self.validate_workflow("invalid_script") self.assertEqual(2, len(errors)) self.assertEqual("workflow_validation_exception", errors[0]['code']) self.assertTrue("NoSuchScript" in errors[0]['message']) self.assertEqual("Invalid_Script_Task", errors[0]['task_id']) self.assertEqual("An Invalid Script Reference", errors[0]['task_name']) self.assertEqual("invalid_script.bpmn", errors[0]['file_name']) def test_repeating_sections_correctly_populated(self): self.load_example_data() spec_model = self.load_test_spec('repeat_form') final_data = WorkflowService.test_spec(spec_model.id) self.assertIsNotNone(final_data) self.assertIn('cats', final_data) def test_required_fields(self): self.load_example_data() spec_model = self.load_test_spec('required_fields') final_data = WorkflowService.test_spec(spec_model.id) self.assertIsNotNone(final_data) self.assertIn('string_required', final_data) self.assertIn('string_not_required', final_data) final_data = WorkflowService.test_spec(spec_model.id, required_only=True) self.assertIsNotNone(final_data) self.assertIn('string_required', final_data) self.assertNotIn('string_not_required', final_data)