import json from json import JSONDecodeError from typing import List, Optional import requests from crc import app from crc.api.common import ApiError from crc.models.protocol_builder import ProtocolBuilderStudySchema, ProtocolBuilderRequiredDocument class ProtocolBuilderService(object): STUDY_URL = app.config['PB_USER_STUDIES_URL'] INVESTIGATOR_URL = app.config['PB_INVESTIGATORS_URL'] REQUIRED_DOCS_URL = app.config['PB_REQUIRED_DOCS_URL'] STUDY_DETAILS_URL = app.config['PB_STUDY_DETAILS_URL'] SPONSORS_URL = app.config['PB_STUDY_DETAILS_URL'] @staticmethod def is_enabled(): if isinstance(app.config['PB_ENABLED'], str): return app.config['PB_ENABLED'].lower() == "true" else: return app.config['PB_ENABLED'] is True @staticmethod def get_studies(user_id) -> {}: ProtocolBuilderService.__enabled_or_raise() if not isinstance(user_id, str): raise ApiError("protocol_builder_error", "This user id is invalid: " + str(user_id)) url = ProtocolBuilderService.STUDY_URL % user_id response = requests.get(url) if response.ok and response.text: try: pb_studies = ProtocolBuilderStudySchema(many=True).loads(response.text) return pb_studies except JSONDecodeError as err: raise ApiError("protocol_builder_error", "Received an invalid response from the protocol builder. The response is not " "valid json. Url: %s, Response: %s, error: %s" % (url, response.text, err.msg)) else: raise ApiError("protocol_builder_error", "Received an invalid response from the protocol builder (status %s): %s" % (response.status_code, response.text)) @staticmethod def get_investigators(study_id) -> {}: return ProtocolBuilderService.__make_request(study_id, ProtocolBuilderService.INVESTIGATOR_URL) @staticmethod def get_required_docs(study_id) -> Optional[List[ProtocolBuilderRequiredDocument]]: return ProtocolBuilderService.__make_request(study_id, ProtocolBuilderService.REQUIRED_DOCS_URL) @staticmethod def get_study_details(study_id) -> {}: return ProtocolBuilderService.__make_request(study_id, ProtocolBuilderService.STUDY_DETAILS_URL) @staticmethod def get_sponsors(study_id) -> {}: return ProtocolBuilderService.__make_request(study_id, ProtocolBuilderService.SPONSORS_URL) @staticmethod def __enabled_or_raise(): if not ProtocolBuilderService.is_enabled(): raise ApiError("protocol_builder_disabled", "The Protocol Builder Service is currently disabled.") @staticmethod def __make_request(study_id, url): ProtocolBuilderService.__enabled_or_raise() if not isinstance(study_id, int): raise ApiError("invalid_study_id", "This study id is invalid: " + str(study_id)) response = requests.get(url % study_id) if response.ok and response.text: return json.loads(response.text) else: raise ApiError("protocol_builder_error", "Received an invalid response from the protocol builder (status %s): %s when calling " "url '%s'." % (response.status_code, response.text, url))