from crc.models.api_models import DocumentDirectorySchema from crc.models.file import File from crc.services.document_service import DocumentService from crc.services.file_service import FileService from crc.services.lookup_service import LookupService def get_document_directory(study_id, workflow_id=None): """ return a nested list of files arranged according to the category hierarchy defined in the doc dictionary """ file_models = FileService.get_files_for_study(study_id=study_id) doc_dict = DocumentService.get_dictionary() files = (File.from_models(model, FileService.get_file_data(model.id), doc_dict) for model in file_models) directory = DocumentService.get_directory(doc_dict, files, workflow_id) return DocumentDirectorySchema(many=True).dump(directory)