603 Commits

Author SHA1 Message Date
mike cullerton
00c1c80356 Backend changes for renaming a bpmn file. 2022-11-17 10:47:35 -05:00
Dan
2249965ade Paginator arguments changed slightly in latest releases of SQLAlchemy
Spiffworkflow 1.2:  Top Level Imports moved to appropriate modules
   - replace 'from SpiffWorkflow import WorkflowException' to 'from SpiffWorkflow.exceptions import WorkflowException'
   - replace 'from SpiffWorkflow import TaskState' to 'from SpiffWorkflow.task import TaskState'
   - replace 'from SpiffWorkflow import Task' to 'from SpiffWorkflow.task import Task'

SpiffWorkflow 1.2: Navigation code removed completely.  Proved to be of little use to folks, was super complex and difficult to maintain.

SpiffWorkflow 1.2: When inserting custom functions into the PythonExecutionEngine - be aware that the task data will act as the full context for execution, and will contain global functions and methods during the exec call.

SpiffWorkflow 1.2: All Task Specs now have a spec_type attribute, containing a descriptive string of the type, such as "User Task", "Script Task", "Start Event" etc...
2022-10-07 14:58:08 -04:00
Dan
5c76c90d04 send_file's arguments changed in a 2.2 of Flask.
Spiffworkflow 1.2:  remove all references of timeit (no longer in SpiffWorkflow)
Spiffworkflow 1.2:  pythonScriptEngine._evaluate no longer accepts a task argument.
Spiffworkflow 1.2:  CancelEventDefinition was removed - please use SignalEventDefinition instead
 EX: replace bpmn_workflow.signal('cancel')  # generate a cancel signal.
              bpmn_workflow.catch(CancelEventDefinition())
 WITH: bpmn_workflow.catch(SignalEventDefinition('cancel'))
Spiffworkflow 1.2:  Task States are JUST integers and TaskSpecNames is now a public dictionary, and can be used to covert a state to human readable string
    EX:  REPLACE:  user_task.state.name
         WITH:     TaskStateNames[user_task.state]
2022-10-05 15:31:56 -04:00
Dan
9ab29cf1fe Upgrade spiffworkflow - the WorkflowTaskExecException was moved - so we have to update all import statements. 2022-07-14 13:37:16 -04:00
mike cullerton
200ace2ce5 Add data_store table to admin page 2022-07-12 14:13:34 -04:00
Dan
b15750d2e4 Cleaned up the Workflow Processor's init method
* removed all the performance metric code into a separate function.
* restructured the code so it is either creating a new workflow, or deserializing an old one.
* Added code to upgrade serialized objects from 1.0 to 1.1
* Using the new method of creating a bpmn_workflow object:
```python
                parser = self.get_spec_parser(self.spec_files, spec_info)
                top_level = parser.get_spec(spec_info.primary_process_id)
                subprocesses = parser.get_process_specs()
                self.bpmn_workflow = BpmnWorkflow(top_level, subprocesses, script_engine=self._script_engine)
```
Fixed a few minor bugs that stood out while testing
1. when updating a workflow, we should check for a valid task BEFORE calling cancel_notify, which requires a valid task.
2. get_localtime - quick fix on the date parser - for python 3.9.
3. the start_workflow script would error out in a way that made it unclear which workflow was having the problem.  Fixed the error.
2022-06-24 11:34:39 -04:00
mike cullerton
4dcba38fdd Add a method to FileSystemService that moves a workflow spec to a different category. 2022-06-07 12:55:48 -04:00
Dan
0746848d8d just a little quick cleanup 2022-06-03 15:28:04 -04:00
mike cullerton
2ac2163db3 Ran into a situation where spiff_task was None 2022-06-02 14:26:15 -04:00
mike cullerton
fd633f6b52 master_workflow_results should be a dictionary 2022-06-01 13:36:56 -04:00
mike cullerton
801da35b1c Open up create/edit/delete access on Study and File models
Add column_searchable, column_filters to TaskLogView, similar to EmailView
2022-05-19 15:54:37 -04:00
Dan
ec61615686 run our github actions for more things than just feature branches.
Don't try to decode a string object.
2022-05-16 15:41:44 -04:00
mike cullerton
b127705216 Add views for Email and TaskLog
Exclude data column from the file table
Clean up imports
2022-05-12 12:17:22 -04:00
Dan
063da419d0 updating for the last version of Spiffworkflow which deprecates the use of task.STATE values, in favor of TaskState.STATE, for example TaskState.READY 2022-05-10 12:28:55 -04:00
mike cullerton
86f3c369a0 Picking nits 2022-05-06 14:13:25 -04:00
mike cullerton
b13aac84e7 Change workflow_state to state 2022-05-06 14:02:11 -04:00
mike cullerton
d91fa9e095 Don't update task if workflow is locked, hidden, or disabled 2022-05-06 08:49:20 -04:00
mike cullerton
0d7b26423c *** WIP ***
Skeleton for updating the workflows in a separate call
2022-04-29 17:40:30 -04:00
mike cullerton
dd2e8ef32f We ran the get_master_spec method twice, instead of using the value in master_spec the second time 2022-04-29 17:36:15 -04:00
Dan
f5c0008b1b Merge remote-tracking branch 'origin/dev' into new-progress-status 2022-04-27 16:16:38 -04:00
Dan
4d9e17986d Merge branch 'dev' into document-history-695 2022-04-27 13:19:53 -04:00
mike cullerton
d7b608cf85 Set ProgressStatus to finance_in_progress when StudyStatus is open_for_enrollment 2022-04-26 15:18:39 -04:00
mike cullerton
97323279cf Merge branch 'dev' into email-name-parameter-726 2022-04-25 15:01:06 -04:00
mike cullerton
098363f82a bug fix. update_file is no longer a static method 2022-04-22 13:36:18 -04:00
mike cullerton
bc4109a9d0 Add include_archived parameter to get_document_directory api endpoint 2022-04-22 13:35:14 -04:00
mike cullerton
430addc33d delete_file method no longer static 2022-04-20 16:26:05 -04:00
mike cullerton
cf68367085 remove unused code
cleanup imports
2022-04-20 11:16:07 -04:00
Dan
85d11d913f Merge branch 'dev' into feature/new_spiff_serializer 2022-04-20 10:59:58 -04:00
mike cullerton
c616a7b621 remove api/file_refactor.py 2022-04-20 10:40:24 -04:00
mike cullerton
fea9c969c2 document => file
file_refactor => file
2022-04-20 10:39:19 -04:00
mike cullerton
89a2650cc8 Put api endpoints back into api/file.py 2022-04-20 10:34:56 -04:00
mike cullerton
9a3c071223 DocumentModel => FileModel
document_id => file_id
2022-04-19 15:12:56 -04:00
mike cullerton
fb5731ff23 Merge branch 'dev' into file-refactor-705
# Conflicts:
#	crc/scripts/delete_task_data.py
#	crc/services/workflow_processor.py
#	tests/base_test.py
#	tests/files/test_delete_task_data.py
2022-04-19 08:19:52 -04:00
mike cullerton
afb11d2b6d form_field_key => irb_doc_code 2022-04-19 07:42:29 -04:00
mike cullerton
1398cb03f7 from_models => from_document_model 2022-04-19 07:36:46 -04:00
mike cullerton
4a4d74c801 file_id => document_id 2022-04-18 16:40:40 -04:00
Dan
5e54c90b47 "Reset" should not mean "re-start". Calling the reset_workflow script will now set the workflow to an "unstarted" state with no outstanding tasks, no json-state structure stored. The workflow is not yet running.
Also:
* Assured that arguments are consistent (we always seem to use workflow_spec_id, so I made sure we use that consistently.
* Don't require named parameters - so it's cool to call it like: reset_workflow('my_workflow_id')
* Task Actions (ie create, assign, etc...) are now an enumeration in the models, and not static variables on Workflow Service, so we can reference them consistently from anywhere.
* Removed some repetitive code
* Always try to validate as much as possible in the scripts to save folks time debugging.
*
2022-04-15 15:36:23 -04:00
Dan
e68c95f03c New serialization code, with the ability to load from the old serlializer if needed.
pipenv insisted on updating some other libraries so slight modifications for markupsafe.
2022-04-15 10:26:23 -04:00
mike cullerton
9097851ae1 We now store type as a string, not an Enum 2022-04-15 10:23:00 -04:00
mike cullerton
aa52b7b790 FileSchemaRefactor => FileSchema 2022-04-12 13:39:48 -04:00
mike cullerton
09e259f554 Moved file api methods to file_refactor
This is temporary
Not sure where they will end up
2022-04-12 13:31:33 -04:00
mike cullerton
89ab55ce6b Removed unused imports 2022-04-12 13:28:49 -04:00
mike cullerton
556af3c425 Removed FileModel, FileDataModel imports
Added DocumentModel
2022-04-12 13:28:04 -04:00
Dan
befc299475 Merge branch 'dev' into chore/fix_validation_errors 2022-03-19 09:53:12 -04:00
Dan
e44ea6e13c merging in from dev. 2022-03-18 16:22:33 -04:00
mike cullerton
eaf8dace97 Process categories in get_study api call 2022-03-18 16:05:01 -04:00
Dan Funk
52c1f2f919
Merge pull request #498 from sartography/staging-500-error
Staging 500 error
2022-03-18 15:53:41 -04:00
Dan Funk
08e116515b
Merge pull request #496 from sartography/bug/cancel-notify-668
Fixes #668 - Cancel/Notify Called when loading last task
2022-03-18 15:31:18 -04:00
Dan
b7489aea43 merging in PI Name changes from Alicia's #499 PR. 2022-03-18 12:30:20 -04:00
alicia pritchett
b9b8210f8a rm pi id refs 2022-03-18 12:04:20 -04:00