83 Commits

Author SHA1 Message Date
Kelly McDonald
a8203ed01d save changes before refactor 2020-12-10 10:06:21 -05:00
Kelly McDonald
c57b17df1e Add a robust way of adding an API key, update examples and documentation for swagger API and add the ability to completely sync the local system from the remote system. 2020-12-09 12:13:17 -05:00
Dan
c14e50046c Merging in changes from Kelly. 2020-11-23 16:20:10 -05:00
Kelly McDonald
871c9e4409 Merge remote-tracking branch 'origin/dev' into dev 2020-11-23 16:12:30 -05:00
Kelly McDonald
255dca09ec Try out some options for SQLAlchemy engine to head off connectoin issues 2020-11-23 16:12:10 -05:00
Dan
5499adb10e Making more modifications to the default configuration to try and debug an issue with the database connections. 2020-11-23 15:33:51 -05:00
Dan
071c98d72e Some minor config tweaks to try and deal with some database timeout issues. 2020-11-19 11:25:58 -05:00
Kelly McDonald
5c4aae6802 Make sure we have PB_SPONSORS_URL defined 2020-11-05 10:45:51 -05:00
Carlos Lopez
2bd906e96d Update github routines to use branches 2020-08-14 11:04:22 -06:00
Dan Funk
31982f81ae Merge branch 'dev' into feature/documents_publishing
# Conflicts:
#	Pipfile.lock
2020-07-30 10:17:08 -04:00
Carlos Lopez
fcb772c900 Reporting to Sentry all captured exceptions and enabling multiple environments 2020-07-19 16:40:33 -06:00
Carlos Lopez
f4eb592b87 Extracting token to env var 2020-07-17 12:31:05 -06:00
Carlos Lopez
419d06c95b Updating file by latest version 2020-07-17 12:31:05 -06:00
Aaron Louie
1f454536e3 Renames TOKEN_AUTH_SECRET_KEY to SECRET_KEY 2020-07-10 11:26:15 -04:00
Carlos Lopez
e947f40ec7 Merge branch 'rrt/dev' into feature/emails-enhancement 2020-06-17 20:10:11 -06:00
Carlos Lopez
c730a7b1ec Sending subject and using default sender 2020-06-17 08:53:02 -06:00
Aaron Louie
720435113b Fixes typo in Alex's uid 2020-06-17 08:54:43 -04:00
Aaron Louie
ffadc8e1b7 Merge branch 'rrt/staging' into rrt/production 2020-06-15 13:28:55 -04:00
Aaron Louie
81b6fc1490 Removes unnecessary extra config file 2020-06-13 23:34:12 -04:00
Aaron Louie
c664a77beb Updates default Protocol Builder base URL 2020-06-13 11:56:00 -04:00
Aaron Louie
cccff9b856 Fixes broken unit tests. But still broken. 2020-06-11 11:29:58 -04:00
Aaron Louie
1f5554d0d8 Merge branch 'rrt/dev' into feature/swagger_admin_authentication 2020-06-11 08:55:29 -04:00
Dan Funk
9281c962a6 Default to no ssl or tls 2020-06-08 14:46:36 -04:00
Dan Funk
777e429382 Merging production back into dev, because we got out of whack somehow. 2020-06-08 14:19:30 -04:00
Dan Funk
8cf420b781 Default mail user name and password to blank. 2020-06-08 14:15:56 -04:00
Carlos Lopez
ed10cc1fa8 Enabling mail debugging 2020-06-08 11:59:09 -06:00
Aaron Louie
87e2379871 Merge branch 'rrt/dev' into feature/swagger_admin_authentication 2020-06-08 10:30:16 -04:00
Aaron Louie
af1c848f65 Merge branch 'rrt/dev' into rrt/testing 2020-06-07 19:57:09 -04:00
Dan Funk
213d3f3501 Merge branch 'feature/better_approval_status' into rrt/dev 2020-06-05 19:11:16 -04:00
Dan Funk
6861991d8f Allow setting the type of approvals you want back, by status.
Some very minor performance enhancements, that will add up on the Approvers page.
2020-06-05 17:49:55 -04:00
Carlos Lopez
663da57d8b Config can read smtp values from environment now 2020-06-05 13:54:37 -06:00
Carlos Lopez
4727d87adb Hooking up emails into process - start 2020-06-04 20:37:28 -06:00
Carlos Lopez
95a3b22bf0 Enabling Sentry for boxes with the flag set 2020-06-01 19:59:55 -06:00
Aaron Louie
be9b613bbb Refactors user authentication endpoints so we can use the Swagger UI in production mode 2020-05-31 16:49:39 -04:00
Aaron Louie
0f04b1dd79 Forces PB_ENABLED to be a boolean, because environment variables always come through as a string 2020-05-27 08:35:04 -04:00
Dan Funk
7869fa596e Protocol Builder isn't disabled on the dcos servers, trying to figure out why, and assure it isn't some sort of weird race condition. 2020-05-26 22:42:49 -04:00
Dan Funk
c7fc6649ed oh my goodness it's late, and I hate docker containers sometimes. 2020-05-25 22:52:36 -04:00
Dan Funk
25adf47277 converting integers to ints, cause that's nice. 2020-05-25 22:47:11 -04:00
Dan Funk
0792aa40a5 Can't override travis settings if you do it with the testing file. 2020-05-25 22:28:33 -04:00
Dan Funk
cbaedad0f6 have testing respect the environment variables if they are set, so we can set them in travis, and use the testing environment there. 2020-05-25 22:02:06 -04:00
Dan Funk
a14168362a Merge branch 'feature/support_ui_dashboard' into dev 2020-05-25 21:31:16 -04:00
Dan Funk
d80a6af754 Disabling the Protocol Builder, and getting the rrt data correct. 2020-05-25 12:53:56 -04:00
Aaron Louie
4eaee57076 Apparently, APPLICATION_ROOT does something. 2020-05-24 00:05:13 -04:00
Aaron Louie
68084a84cf Adds base href environment variable. Sets base path for API and all routes from BASE_HREF environment variable. 2020-05-23 22:07:22 -04:00
Dan Funk
503c1c8f18 Allow disabling the Protocol Builder
PB_ENABLED can be set to false in the configuration (either in a file called instance/config.py, or as an environment variable)

Added a check in the base_test, to assure that we are always running tests with the test configuration, and bail out otherwise.  Setting TESTING=true as an environment variable will get this, but so well the correct ordering of imports. Just be dead certain the first file every test file imports is base_test.py.

Aaron was right, and we call the Protocol Builder in all kinds of awful places.  But we don't do this now.  So Carlos, you should have the ability to reuse a lot of the logic in the study_service now.

I dropped the poorly named "study-update" endpoint completely.  We weren't using it. POST and PUT to Study still work just fine for doing exactly that.

All the tests now run and pass with the Protocol builder disabled. Tests that specifically check PB behavior turn it back on for the test, or mock it out.
2020-05-22 14:37:49 -04:00
Dan Funk
b490005af7 dropping the remaining config stuff for flask_sso.
updaing the user 'sso' endpoint to provide additional information for debugging.
Pulling information from ldap to stay super consistent on where we get our information.
2020-05-22 09:50:18 -04:00
Dan Funk
b3ae9ee770 changing the mapping, because 'Uid' not 'uid' 2020-05-21 16:28:34 -04:00
Aaron Louie
daaa7be4ba Corrects typo 2020-05-16 13:13:49 -04:00
Aaron Louie
183a2c5d66 Run flask on PORT_0 environment variable, if defined. 2020-05-16 11:39:45 -04:00
Aaron Louie
bf563e177b Allows port to be set via environment variable 2020-05-15 21:32:33 -04:00