373 Commits

Author SHA1 Message Date
Aaron Louie
08fba1a4dc Merge branch 'dev' into feature/dynamic_enum_list 2020-07-15 13:09:02 -04:00
Dan Funk
c7662315aa Assure that any errors that occur during the do_engine_steps is correctly captured and returned to the end user or configurator with enough information for them to act on. 2020-07-15 11:16:35 -04:00
Dan Funk
fa7608053a fixing a failed test. 2020-07-14 22:23:54 -04:00
Dan Funk
d85ca1ce51 Whenever a workflow is loaded or updated, add events to the TaskEvent table with assignments for the next set of ready tasks, along with who should complete those tasks.
Add the lane information to the Task model.
Drop the foreign key constraint on the user_uid in the task log, as we might create tasks for users before they ever log into the system.
Add a new endpoint to the API called task events.  It should be possible to query this and get a list of all tasks that need a users attention.
The task events returned include detailed information about the workflow and study as sub-models
Rename all the actions in event log to things that are easier to pass over the api as arguments, make this backwards compatible, updating existing names in the database via the migration.
Throughly test the navigation and task details as control of the workflow is passed between two lanes.
2020-07-14 22:16:44 -04:00
Aaron Louie
d71ff80eac Adds end and start events 2020-07-14 13:42:52 -04:00
Dan Funk
9077ff3ebf It is not possible to use task_data for an auto-complete field. It's too expensive an operation to provide that feature on the backend, and the data already fully resides on the front end anyway. Task-data can be used to populate enum fields if needed, so it can populate dropdowns, radios and checkboxes, just not auto-complete. 2020-07-14 11:38:48 -04:00
Dan Funk
a48322ef6a Partial work on CR Connect Roles.
Adding checks in the API to assure the correct person is completeing a task based on the task's lane.
Adding lane to the Navigation item.
Adding a check to assure that unique user ids can be identified using task.data
Added some additional ldap entries to make testing and development easier.
Removed a big chunk of duplicate code from task_tests_api
Modified some of the helper functions to make it easier to test as specific users.
Added some additional bpmn models to the tests for testing lanes and roles.
2020-07-14 10:29:25 -04:00
Aaron Louie
463660f185 Merge branch 'dev' into feature/dynamic_enum_list 2020-07-13 17:47:56 -04:00
Aaron Louie
07066b8a16 Looks up enum options from task data 2020-07-13 17:46:28 -04:00
Dan Funk
9e29a43785 Correct for a race condition where multiple lookup tables are built for the same field and workflow specification, causing it to appear that the models are not updating correctly. 2020-07-13 12:45:51 -04:00
Aaron Louie
b7920989ed WIP: Adds Camunda property for retrieving enum field options from task data. 2020-07-10 14:48:38 -04:00
Aaron Louie
7f0b35ff27 Merge branch 'dev' into feature/enum_lookup_data 2020-07-10 10:27:51 -04:00
Dan Funk
ff7c30b879
Merge pull request #138 from sartography/fix/cleanup_todos
Cleanup pending  TODOs
2020-07-10 08:26:47 -04:00
Dan Funk
6a79fb3581 There may be multiple investigators of the same type that come back from the protocol builder, adding some tests and additional code to handle this, but still keep the list flat, currently appends a number to the investigator type when there is more than one. 2020-07-07 17:16:33 -04:00
Carlos Lopez
64f9bd2ca7 Tiny leftover 2020-07-07 08:38:33 -06:00
Carlos Lopez
b4e127b3b7 Cleaning properly previous versions 2020-07-07 08:32:41 -06:00
Carlos Lopez
a302208890 Updating test for study with approvals 2020-07-07 08:32:41 -06:00
Carlos Lopez
c7b864f9c7 Cleaning up old notes 2020-07-07 08:32:20 -06:00
Aaron Louie
517cd8fc91 Merge branch 'dev' into feature/enum_lookup_data 2020-07-06 16:31:19 -04:00
Dan Funk
bb4000ff6d Don't attept to load up the workflows for abandoned studies. 2020-07-06 16:01:43 -04:00
Dan Funk
8a66128189 Bug fixes after bumping the version of Spiffworlflow to the latest - which has fixes for sequential multi-instance. 2020-07-06 15:34:24 -04:00
Dan Funk
419c05e46c
Merge branch 'dev' into fix/more-info-in-exceptions 2020-07-06 12:51:24 -04:00
Dan Funk
a5cef8775e * Modifying the StudyInfo script to return both "investigators" and "roles", the investigators argument will return only the current active investigators according to the protocol builder. The "roles" argument returns all possible roles - it is what "investigators" use to be.
* The Task.title returned to the front end will now attempt to process the "display_name" property for dot-notation syntax, making it possible to use this for multi-instance tasks,
  but will work in all cases where we want he title to change based on values in the data model.
* Fixing a bug the test_study_api where it wasn't updated when we made recent changes to the different states of a study.
*
2020-07-06 12:09:21 -04:00
Aaron Louie
1d9fef380a Merge branch 'fix/more-info-in-exceptions' into feature/enum_lookup_data 2020-07-03 14:22:11 -04:00
Aaron Louie
f344fe60c0 WIP: Adds enum field lookup option data 2020-07-03 12:20:10 -04:00
Carlos Lopez
817333f26e Adding proper exception information 2020-07-02 16:10:33 -06:00
Dan Funk
84973d2351 resolving comments from pull request. 2020-06-30 12:24:48 -04:00
Dan Funk
93bf46354b A last minute change to make the API a little clearer and cleaner broke some tests. 2020-06-30 11:12:28 -04:00
Dan Funk
f183e12fe5 Provides some basic tools for getting additional information about a lookup field.
Adds an optional 'value' parameter to the lookup endpoint so you can find a specific entry in the lookup table.
Makes sure the data attribute returned on a lookup model is a dictionary, and not a string.
Fixes a previous bug that would crop up if double spaces were used when performing a search.
2020-06-30 10:34:16 -04:00
Dan Funk
d3ce1af1ce Provides some basic tools for getting additional information about a lookup field.
Adds an optional 'id' parameter to the lookup endpoint so you can find a specific entry in the lookup table.
Makes sure the data attribute returned on a lookup model is a dictionary, and not a string.
Fixes a previous bug that would crop up in double spaces were used when performing a search.
2020-06-30 10:00:22 -04:00
Aaron Louie
e650a46073 Fixes local testing bug where working directory was sometimes wrong. 2020-06-29 16:41:42 -04:00
Dan Funk
49e80398be Merge branch 'rrt/dev' into dev 2020-06-29 14:56:01 -04:00
Aaron Louie
a996c81508 Gets mi_index out of Spiff task internal data 2020-06-28 11:35:35 -04:00
Carlos Lopez
d4bcb9af65 Proper error handling in csv/dumps for approvals 2020-06-27 13:59:04 -06:00
Aaron Louie
848ad563d3 Only filters by mi_index if task has a mult_instance_index 2020-06-26 12:47:42 -04:00
Aaron Louie
f9f3003ef0 Filters by multi-instance index, if applicable 2020-06-26 12:31:37 -04:00
Dan Funk
150117587e Merge branch 'dev' into feature/parallel_multiinstance_tasks 2020-06-25 23:20:38 -04:00
Carlos Lopez
665faaa175 Send emails from service 2020-06-25 16:18:42 -06:00
Carlos Lopez
44995e3813 Merge branch 'feature/emails-enhancement' of github.com:sartography/cr-connect-workflow into feature/emails-enhancement 2020-06-25 14:37:04 -06:00
Aaron Louie
c3ceda4c2f Replaces xml.etree with lxml.etree 2020-06-25 14:02:16 -04:00
Carlos Lopez
7116b582e8 Splitting commands properly without losing double quoted strings 2020-06-25 12:01:24 -06:00
Dan Funk
fe5a7ddce3 Merge remote-tracking branch 'origin/rrt/dev' into feature/emails-enhancement 2020-06-25 13:29:06 -04:00
Carlos Lopez
5d1ae402b6 Slight refactor on data passed to template rendering 2020-06-24 22:43:44 -06:00
Carlos Lopez
a0d877e02f Feedback from PR addressed 2020-06-24 22:23:31 -06:00
Carlos Lopez
5327b469f6 Merge branch 'rrt/dev' into feature/emails-enhancement 2020-06-24 21:46:53 -06:00
Carlos Lopez
dd10e56d1a Adding forgotten variables to returned dict 2020-06-22 14:56:24 -06:00
Carlos Lopez
dc5ffd29d0 Refactoring shared code 2020-06-22 14:07:57 -06:00
Carlos Lopez
e5541e4950 Enable CSV download 2020-06-22 09:24:58 -06:00
Carlos Lopez
b8d60ca944 Spreadsheet generation 2020-06-22 07:14:00 -06:00
Dan Funk
6aec15cc7c Shifting to a different model, where the TaskEvents store ONLY the form data submitted for that task.
In order to allow proper deletion of tasks, we no longer merge data returned from the front end, we set it directly as the task_data.
When returning data to the front end, we take any previous form submission and merge it into the current task data, allowing users to keep their previous submissions.
There is now an "extract_form_data" method that does it's best job to calculate what form data might have changed from the front end.
2020-06-19 08:22:53 -04:00