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cr-connect-workflow
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1072 Commits

Author SHA1 Message Date
nilez e32c1db4c8 Merge remote-tracking branch 'origin/dev' into bug/missing_pi_name_246 
# Conflicts:
#	crc/models/study.py
#	crc/services/study_service.py
#	crc/services/workflow_service.py
#	tests/study/test_study_associate_script.py
 2021-08-12 12:59:15 -04:00
nilez d20b68e483 Fixed Deprecation Warnings in Test Files 2021-08-12 12:33:27 -04:00
nilez 2732071585 Merge branch 'dev' into bug/missing_pi_name_246 2021-08-12 12:07:25 -04:00
Dan 40727c7ce6 avoid erroring out when unable to calculate a value expression as a part of finding a default value. 2021-08-12 11:35:05 -04:00
Dan Funk adb1b74822
Merge pull request #352 from sartography/post-process-empty-field-408 
Post process empty field #408
 2021-08-12 10:53:26 -04:00
mike cullerton d07bac27ca Fix for hidden file data field. 
We were processing a field that didn't have a value.
Ticket 408
 2021-08-11 16:43:50 -04:00
Dan 318cd34f81 bouncing to fix a bug in SpiffWorkflow that was holding outo outdated data deed within the python_script_engine. 
This caused validation to fail for valid repeat sections, so including a fix to allow that validation to continue.
 2021-08-11 14:21:23 -04:00
Dan 848c2e622f Always use a schema to define what is being returned, it enforces consistency of the API and internally we can depend on well defined objects. 2021-08-10 16:16:08 -04:00
Dan 913c12c02d Merge branch 'dev' into bug/pi_name_missing_246 2021-08-10 15:06:52 -04:00
Kelly McDonald 960d302c03 Finish #367 - Make sure that we only use a primary_id if it is in the workflow that we are currently working on - otherwise it is a library and might have its own primary id. 2021-08-10 09:15:38 -04:00
Kelly McDonald 6e1fedb704 Add tests for libraries, remove an API endpoint that didn't make sense after recent changes and remove some commented out sections that were not needed after some decisions about the api endpoints were made 2021-08-03 10:02:22 -04:00
Kelly McDonald 41ad7935f8 Merge branch 'dev' into 367-Call-Activity 
# Conflicts:
#	Pipfile.lock
 2021-07-29 09:28:21 -04:00
Kelly McDonald 217e61eed3 next_task returns the next available task, except when the task is completed when it returns the EndEvent - 
The problem was that it was returning the first EndEvent it found, not the last one. This caused a problem when we had a CallActivity which has its own EndEvent.

Fixes #399
 2021-07-27 09:19:08 -04:00
Kelly McDonald b857fddbad commit in intermediate changes to work on a bug 2021-07-26 13:00:11 -04:00
Dan Funk 25e00823a7
Merge pull request #342 from sartography/enum-file-data-375 
Enum file data #375
 2021-07-23 13:47:57 -04:00
mike cullerton 4c8a86f9bf Fixed bug where processing file data only worked for enums. 2021-07-23 11:24:17 -04:00
Dan 7f5c7417d8 Print out some additional debugging information in the email script so we can tell what is happening and where. 2021-07-22 16:02:08 -04:00
NWalker4483 38b8c7fcdf Fixed email_cc test 2021-07-22 15:08:28 -04:00
NWalker4483 b94d49076d Fixed Associate API Endpoint description 2021-07-22 14:36:00 -04:00
NWalker4483 90425ebbb3 Merge branch 'bug/missing_pi_name_246' of https://github.com/sartography/cr-connect-workflow into bug/missing_pi_name_246 2021-07-22 14:09:34 -04:00
NWalker4483 a73d1794eb Fixed Associate API Endpoint description 2021-07-22 14:09:24 -04:00
Dan Funk 61504664d4
Merge pull request #346 from sartography/bug/346_timer_fails_to_send_email 
fixes #346, allow emails to fire in scheduled events
 2021-07-22 13:40:12 -04:00
Dan 2009a794ea We were depending on an active http request existing in order to fire emails, using that request to determine the front end url. We have the frontend url in our config file, and we don't have a request object when running scheduled tasks, so I just use our configuration setting instead. 2021-07-22 13:25:06 -04:00
NWalker4483 1cfb7f96fa Missing uid declaration in study service corrected 2021-07-22 11:28:11 -04:00
mike cullerton 8df1145471 Modify the LDAP service to only use lowercase UIDs. 
UVA always returns the UID as lowercase.
This caused a postgres unique value problem for us.
 2021-07-22 10:46:09 -04:00
mike cullerton 428802b9d0 Modify LDAP script so that it doesn't raise an error when we don't get a record back from LDAP. 
We now return an empty dictionary
 2021-07-22 10:44:41 -04:00
Kelly McDonald 48516e4009 Parent side working 2021-07-22 10:23:05 -04:00
Kelly McDonald 2455495457 got library side working - still need to have parent working 2021-07-22 10:20:34 -04:00
NWalker4483 3906580604 Merges getStudyAssociates() endpoint 2021-07-20 14:25:01 -04:00
NWalker4483 a263447806 Merges getStudyAssociates() endpoint 2021-07-20 13:57:32 -04:00
NWalker4483 4632c6374f Merge branch 'dev' into bug/missing_pi_name_246 
# Conflicts:
#	crc/api.yml
#	crc/services/study_service.py
 2021-07-20 11:44:11 -04:00
mike cullerton 354e20c34b Use the data_store_service to set the data_store, rather than access DB directly. 
Pass the label explicitly (as the value)
 2021-07-15 13:09:40 -04:00
Dan dd67a5e650 Never set the date to datetime.utcnow() on DateTime fields. We want this to fall back on the func.now() method and allow the database to set the time on insert. 2021-07-12 15:58:32 -04:00
Mike Cullerton 522ca9d164
Merge pull request #340 from sartography/bug/better_errors_on_scheduled_tasks 
Assure we log reasonably clear errors when executing scheduled tasks …
 2021-07-12 10:13:02 -04:00
Mike Cullerton d1bf370a39
Merge pull request #339 from sartography/restrict-loaded-studies-374 
Restrict loaded studies #374
 2021-07-12 10:11:34 -04:00
Mike Cullerton 7070761089
Merge pull request #338 from sartography/document-spreadsheet-name-380 
Document spreadsheet name #380
 2021-07-12 10:11:16 -04:00
Dan f982745d32 fixing a failing test, don't assume the study and workflow ids will always be 1. 2021-07-12 10:00:39 -04:00
Dan 1916c4ff54 Assure we log reasonably clear errors when executing scheduled tasks in the background, so that sentry can pick them up and they can be addressed effectively. 2021-07-12 09:43:12 -04:00
mike cullerton 690c059335 get_studies_for_user is no longer a static method 2021-07-09 10:37:57 -04:00
mike cullerton dad2de9f0c get_user_studies now checks study_details['REVIEW_TYPE'] before displaying a study. 
This corresponds to REVIEWTYPENAME being `Full Committee`, `Expedited`, `Non-UVA IRB Full Board`, or `Non-UVA IRB Expedited`
 2021-07-09 10:37:25 -04:00
Kelly McDonald 79c69037dd Filter out Library categories from the list returned 2021-07-08 08:57:40 -04:00
mike cullerton d6f9b013f7 Change `irb_documents` to `documents` 2021-07-07 12:54:03 -04:00
mike cullerton 23180908c8 Undo change. Wrong branch 2021-07-07 12:43:51 -04:00
mike cullerton c39e08972d Change irb_documents to documents 2021-07-07 12:42:01 -04:00
Dan Funk 3c52453c26
Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:35:24 -04:00
Dan Funk 2ed436327f
Merge pull request #333 from sartography/check-study-script-273 
Check study script #273
 2021-07-07 11:28:32 -04:00
Dan Funk db9b228735
Merge pull request #334 from sartography/WaitingEventsHotPatch 
Make a change so that anything that has a waiting event is labeled in…
 2021-07-07 11:27:10 -04:00
Dan 2a45f2fcda Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:24:00 -04:00
mike cullerton b0cf74fa3d Merge branch 'dev' into add-by-user-61 
# Conflicts:
#	tests/files/test_files_api.py
 2021-07-07 10:46:50 -04:00
mike cullerton c11b5cfb29 Add user_uid to api output 2021-07-07 08:18:02 -04:00