Commit Graph

581 Commits

Author SHA1 Message Date
Kelly McDonald cbd1d01203 Add URL to the study_info('documents') script
fixes #321 - I merged in branches that fix #320 and #297

320-add-default-for-file-data-get
297-filename-in-documents
2021-05-05 11:30:08 -04:00
Kelly McDonald 7608a889fb Add default capability to file_data_get
script
2021-04-30 10:11:50 -04:00
Dan Funk 21e95b106d
Merge pull request #295 from sartography/299-document-datastore
Add file_data_get and file_data_set functions that can be accessed in…
2021-04-26 12:49:46 -04:00
Dan 047c68b2b5 Just some quick tidying up. Dropping commented out code, and using the SQLAlchemyAutoSchema to handle serializing db models 2021-04-26 12:31:22 -04:00
Kelly McDonald d3d7eeb309 Add file_data_get and file_data_set functions that can be accessed in a bpmn script function
Fixes #299
2021-04-26 09:41:14 -04:00
Dan dd7c5fd1c1 Fixes #306 assure that we take the doc_code into account if passed in as an argument to the API for get_files. 2021-04-23 16:16:19 -04:00
Dan cf051a7d4f Merge branch 'dev' into 277-Document-pane
# Conflicts:
#	crc/api/file.py
2021-04-21 14:09:44 -04:00
Dan ecff7d20d3 Adding a test for the new endpoint and cleaning up the API documenation 2021-04-21 14:00:19 -04:00
Kelly McDonald e2197ddab9 Changes to support the frontend data pane
fixes #277 and requires frontend branch 277-document-pane
2021-04-20 08:12:27 -04:00
Dan Funk 277beb345f
Merge pull request #290 from sartography/auto-set-primary-bpmn-142
Auto set primary bpmn #142
2021-04-16 13:36:02 -04:00
mike cullerton fdaa069886 Added test for automatically setting the primary bpmn for a workflow spec 2021-04-15 13:29:42 -04:00
mike cullerton 8953637466 moved the minimal_bpmn method to base_test 2021-04-15 13:28:03 -04:00
mike cullerton 2d4a68da6d Added test for deleting files on restart. 2021-04-15 11:30:17 -04:00
mike cullerton 69396f9888 Modified base_test restart_workflow_api to accept and pass on the new delete_files argument when restarting a workflow 2021-04-15 11:28:35 -04:00
Dan 069de83bd5 forgot to include a bpmn for the tests. 2021-04-09 09:02:43 -04:00
Dan 6427a54d74 Set the correct default value on enumerations - if it is a multi-select enum (checkbox is set) then it should return a default value of an empty array, and not a dictionary. 2021-04-09 08:40:58 -04:00
Dan 41310b6879 Allow both a keyword argument, a single argument when calling delete_file. And call it "delete_file" to be more conssitent with existing scripts. 2021-04-08 13:42:17 -04:00
Dan Funk 611c72f431
Merge pull request #284 from sartography/delete-uploaded-file-script-283
Delete uploaded file script #283
2021-04-08 12:42:30 -04:00
mike cullerton 5155db89f9 Added test for deleting multiple files.
Fixed existing tests to accommodate changes to test workflow bpmn file
2021-04-05 15:13:32 -04:00
mike cullerton 70fbd49aab Modified my test workflow so it works better for testing multiple file deletions 2021-04-05 15:12:14 -04:00
mike cullerton 33cef2bd2a Added tests for failing conditions 2021-04-05 13:19:29 -04:00
mike cullerton c6b1fd4e52 Fix for failing tests. Q_COMPLETE is no longer a column in the PB Mock study table. 2021-04-05 13:18:56 -04:00
mike cullerton 61f37ff894 Changed the order of imports so I could debug a failing test 2021-04-05 13:16:43 -04:00
Dan 501487b31c Assure we convert to box for validations as well, and test the bloodly snot out of this. 2021-04-05 12:47:50 -04:00
Dan 727aa72e18 Fix a bug from recent performance improvments - be sure that our study info script returns dicts that can be referenced immediately with dot notation, as this is a common pattern in our bpmn script tasks. 2021-04-05 11:31:06 -04:00
mike cullerton 9317e49e65 Merge branch 'dev' into delete-uploaded-file-script-283 2021-04-05 10:40:33 -04:00
mike cullerton d81497f8cb Test and workflow for new script to delete IRB documents 2021-04-05 08:55:41 -04:00
Dan dcb4e7b736 fixing an error by taking a bit of the magic out of one of Mike's regex hinting tools. I figure the hint is still good, and a little less bittle, and all the information is already there if people need to dig. 2021-04-02 17:58:27 -04:00
Dan 3ad3a086ba Merge branch 'dev' into 263-optimize-dashboard 2021-04-02 17:12:02 -04:00
Dan 2100f27976 fixing the api.yml file which was starting to throw errors when updating the libraries.
Seems that sqlalchemy now has a hard time incrementing sequences, so putting in a fix for this.
Upgrading many of our libraries, to avoid any disconnects as we try to handle security patches from these automated bumps.
2021-04-02 17:10:05 -04:00
Kelly McDonald 116bf5e7aa Merge branch 'dev' into 263-optimize-dashboard
# Conflicts:
#	crc/services/study_service.py
2021-03-31 10:20:33 -04:00
Kelly McDonald 60f5be1aef Check in - pending change from @cullerton 2021-03-30 12:10:49 -04:00
Dan Funk b5d4df595f
Merge pull request #271 from sartography/master-workflow-status-messages-222
Master workflow status messages 222
2021-03-26 20:52:24 -04:00
Dan Funk 123ec50912
Merge pull request #272 from sartography/infinite-validations-262
Infinite validations 262
2021-03-26 19:49:42 -04:00
Dan ac4877fecf Merge remote-tracking branch 'origin/dev' into master-workflow-status-messages-222 2021-03-26 17:47:57 -04:00
mike cullerton 3ee8109535 Tests for the changes to master workflow status dictionary
Test for each valid WorkflowState
Test for all three failure states; not in status, not a dictionary, not a valid state.
2021-03-22 17:52:14 -04:00
mike cullerton 47ff29e3ab Added a test for dictionary output from a decision table.
Will need dictionary output for master workflow status messages.
2021-03-18 12:25:27 -04:00
mike cullerton c4b52f85af Test and workflow for testing infinite loop code. 2021-03-17 14:52:50 -04:00
mike cullerton 70efdb4788 The `do_task_validate_only` method in the `get_study_associates` script now returns a mocked list of associates.
It used to return `True`, and this caused shield validation to fail when looping over the results of `get_study_associates`.
(You can't loop over a boolean)

Added a for loop in `study_sponsors_associate.bpmn` to test for this.
Moved `BaseTest` import to the top of `test_study_associate_script` because debug was failing.
2021-03-16 08:57:30 -04:00
Dan Funk 14386b8ba9
Merge pull request #264 from sartography/bug/243_complete_all
Bug/243 complete all
2021-03-14 12:34:55 -04:00
Dan 6f80d816cd My privous efforts didn't take into account the fact that we use dot notation in field names.
I've re-worked the workflow form endpoint, so that it only accepts the data that should be in the form, and ignores any other values that come back from the front end.  It seems Formly has some bugs that were introducing confusing information, and I want everything to behave consistently.
I had to re-work some of the tests, which were relying on an ability to set data through a form post without having a corresponding form to do so.
2021-03-14 12:20:39 -04:00
Dan 15c64c862e Adding an argument to update task that will allow it to complete all remaining tasks through an "update_all" flag,
this will allow us to remove some fairly complex logic from the front end that isn't behaving properly.
2021-03-12 20:41:07 -05:00
Mike Cullerton e7c78c8d0e
Merge branch 'dev' into study-associated-email-207-223 2021-03-11 12:38:47 -05:00
mike cullerton b403a3015e Modified existing tests to work with changes to the email script.
Added test for associated emails.
Added test for cc argument.
2021-03-11 11:40:46 -05:00
mike cullerton 8bda9889b1 Added a test for the send_email endpoint. 2021-03-11 11:38:34 -05:00
mike cullerton fa028dd517 Modified the email_script workflow to accommodate the changes to the email script.
Workflow now uses keyword arguments; subject, recipients, and cc.
If cc is not passed in, we set it to None.
2021-03-11 11:37:54 -05:00
mike cullerton 78ae719b97 Moved this test to the test_email_script test file. 2021-03-11 11:35:08 -05:00
mike cullerton fa4707811e Removed the test and templates from the unused mails service.
Mails was removed in previous commit.
2021-03-11 11:34:24 -05:00
Mike Cullerton eaf52a21ca
Merge pull request #260 from sartography/bug/delete_study
Allows us to delete a study even if there are emails, and associated …
2021-03-09 13:51:25 -05:00
Dan 80ff8a6212 Allows us to delete a study even if there are emails, and associated study users connected to that study. 2021-03-09 13:31:26 -05:00