sartography/cr-connect-workflow
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442 Commits

Author SHA1 Message Date
Aaron Louie
af1bb9f80d Adds more useful metadata to approvals and documents status scripts. Fleshes out and pretties up Documents & Approvals screen 2020-04-23 23:32:20 -04:00
Aaron Louie
47de010a88 Puts data from sequential calls to StudyInfo into the right place. Sets the required document flag correctly. 2020-04-23 21:02:08 -04:00
Aaron Louie
d91f690388 Adds documents_status StudyInfo script. Adds Documents & Approvals workflow spec. 2020-04-23 19:25:01 -04:00
Aaron Louie
2e601719ad Fixes broken spec 2020-04-23 17:10:10 -04:00
Dan Funk
08140eca17 Merge branch 'master' of github.com:sartography/cr-connect-workflow 2020-04-23 15:01:02 -04:00
Dan Funk
3aeb7ad116 Server isn't erroring out, but can't find the lookup table id in the database, so trying to use the in-memory model instead, to give things time to get to the database. Really unsure what is happening here. Hard to see in the database. 2020-04-23 14:58:17 -04:00
Aaron Louie
796c109611 Adds approvals to study service 2020-04-23 14:40:05 -04:00
Dan Funk
b5b46b7c2c better overall search results for type ahead. Still dealing with stop words failing. 2020-04-23 12:05:08 -04:00
Dan Funk
65b29e1a9d Don't just bomb out as soon as someone types an empty string. 2020-04-23 09:44:11 -04:00
Dan Funk
7b085c9c9d Adding an API Endpoint that will return a list of LookupValues that match a given query - can be used to populate an auto-complete table. 2020-04-22 19:40:40 -04:00
Dan Funk
6de8c8b977 Create lookup tables for XSL files referenced in workflows so we can do full text searches and populate lists on the fly quickly. 2020-04-22 15:37:02 -04:00
Dan Funk
79d9a66ce3
Merge pull request #32 from sartography/feature/new_study_states 
Updated the study status to use a different enumeration.  Migration c…
 2020-04-21 17:21:10 -04:00
Dan Funk
fd0adb1d43 Updated the study status to use a different enumeration. Migration correctly handles modifying the enum. 
INCOMPLETE = 'Incomplete in Protocol Builder',
  ACTIVE = 'Active / Ready to roll',
  HOLD = 'On Hold',
  OPEN = 'Open - this study is in progress',
  ABANDONED = 'Abandoned, it got deleted in Protocol Builder'
 2020-04-21 17:13:30 -04:00
Aaron Louie
b10f72c085 Updates workflow spec. Removes old DMN files 2020-04-21 14:19:57 -04:00
Dan Funk
0a74bf8c44 We can now collect, and provide "extension properties" on a task as set in the camunda modeler. 
These are provided as "properties" on a task, and are identical in structure to properties on a form field.
 2020-04-21 12:07:59 -04:00
Dan Funk
ec112f52be Make use of cleaner data provided by Spiffworkflow about multi-instance settings. 2020-04-21 11:43:43 -04:00
Dan Funk
ee999a0f15 fixing a bunch of stupid mistakes because I am tried. 2020-04-20 20:28:12 -04:00
Dan Funk
d2b31bb3d1
Merge pull request #31 from sartography/feature_personnel_multi_instance 
Feature personnel multi instance
 2020-04-20 16:17:43 -04:00
Dan Funk
edbd75bb75 Connect LDAP Requests to the StudyInfo service so we get back additional details. 2020-04-20 16:02:13 -04:00
Dan Funk
2d3402a719 Ldap Service with Test and mocks. 
LDAP_URL can be set in an environment variable.
 2020-04-20 15:16:33 -04:00
Aaron Louie
194ed55801 Merge remote-tracking branch 'origin/master' 2020-04-20 12:04:18 -04:00
Aaron Louie
00312d244a Cleans up debugging config print 2020-04-20 12:04:10 -04:00
Dan Funk
d3dd9dcc25 Functional multi-instance - works with no changes to the front end - though I've added some attributes to task so we could give people a sense of how many iterations they will go through. 2020-04-19 15:14:10 -04:00
Dan Funk
b099cac174 Merge branch 'master' into feature_personnel_multi_instance 2020-04-17 14:26:23 -04:00
Dan Funk
c8b817e98a Be careful not to clean out all the data when a form is submitted, just merge the data in as it comes. 2020-04-17 13:51:48 -04:00
Dan Funk
241980f98f If you name add a file to a workflow that has the exact same name as a Task Spec's ID, and an extension of "md", it wll use that file as the markdown content, and ignore the markdown in the documentation on the task spec. 
Moving the primary process id from the workflow model to the file model, and assuring it is updated properly.  This was causing a bug that would "lose" the workflow.
 2020-04-17 13:30:32 -04:00
Dan Funk
565ad01393 Merge branch 'master' into feature_personnel_multi_instance 2020-04-16 11:22:50 -04:00
Aaron Louie
35fa241a4c Printing out some more stuff for debugging 2020-04-15 14:43:09 -04:00
Dan Funk
678a45fa76 Merge branch 'master' into feature_personnel_multi_instance 2020-04-15 12:42:36 -04:00
Dan Funk
a5f5468e9a
Merge branch 'master' into feature/customer_lookup 2020-04-15 12:41:35 -04:00
Dan Funk
288efff364 Merge branch 'master' into feature_personnel_multi_instance 2020-04-15 12:36:50 -04:00
Dan Funk
dc2895cb05 Allow configurators to upload xls files into a workflow for defining enumrations of values for dropdown lists in forms. Fixing lots of tests. 
Found a problem where the documentation for elements was being processed BEFORE data was loaded from a script.  There still may be some issues here.

Ran into an issue with circular dependencies - handling it with a new workflow_service, and pulling computational logic out of the api_models - it was the right thing to do.
 2020-04-15 11:13:32 -04:00
Aaron Louie
faf4c0df97 Updates BPMN and DMN files 2020-04-15 10:58:13 -04:00
Dan Funk
aa17e30762 Updating libraries, modifying study_info script to save data in a consistent way, waiting on more fixes in spiffworkflow before continuing. 2020-04-13 16:23:31 -04:00
Aaron Louie
9a9922c473 Adds display order to Workflow Spec 2020-04-09 14:25:14 -04:00
Dan Funk
316b9e6e8d Fixing a stupid mistake - must have typed a ' mark during commit. 
Script should inherit from object.
Updating the ids so I could more easily test and assure things were working correctly.
 2020-04-08 13:39:42 -04:00
Dan Funk
c79415a794 throw a sensible error when study is not found on get_study (don't 500) 
some ugly fixes in the file_service for improving panda output from spreadsheet processing that I need to revist.
now that the spiff-workflow handles multi-instance, we can't have random multi-instance tasks around.
Improved tests around study deletion.
 2020-04-08 13:28:43 -04:00
Aaron Louie
519a034d87 Updates last_updated when file data is saved. Returns last_updated as lastModified in response header for file data endpoint. 2020-04-08 12:58:55 -04:00
Dan Funk
9bf5c9e727 Fixing an error that would prevent the correct counts from displaying if the record didn't come back from the protcol builder. 2020-04-07 14:14:43 -04:00
Dan Funk
697127660f Assure that all script tasks place data in a dictionary that is named exactly the same as the class - which is also the same as the Script tag. 2020-04-07 14:09:21 -04:00
Dan Funk
c6b6ee5d70 Renamed the required_docs script to just "documents", and it returns all documented in the irb_documents look up table indexed on the "Code" - so details become available in the task data like "documents.IRB_INFOSEC_DOC.required". 
Updated the irb_documents with shorter code names, thanks to Alex. Re-worked the DMN models so they can properly read from this new datastructure.
 2020-04-06 16:56:00 -04:00
Dan Funk
d58a90a727 Merge branch 'master' of github.com:sartography/cr-connect-workflow 2020-04-06 13:24:01 -04:00
Aaron Louie
e6550b7e39 Fixes Formly expression syntax error 2020-04-06 13:22:49 -04:00
Aaron Louie
419d619efa Updates BPMN & DMN files with latest from staging 2020-04-06 13:12:34 -04:00
Dan Funk
e283b86466 Fixing a bug with deleting a study. 2020-04-06 13:08:17 -04:00
Dan Funk
a322801c91 Allow a study to be deleted, even if some statistics are laying around. 2020-04-03 16:41:16 -04:00
Dan Funk
60a10bb688 Marshmallow isn't the right tool when dealing with large models with lots of null values. Rather than fight the process of mamaging the Study Details, I'm letting that fall through, and we can test on an individual value or maybe set up a constants array when that becomes meaningful. 2020-04-03 16:24:38 -04:00
Dan Funk
fe40be752f fixing a bug in the Protocol builder schema, more to fix there, and deserves a test, but this corrects the investigators 2020-04-03 13:52:12 -04:00
Dan Funk
b39e4b382f Catch more template processing errors. 2020-04-02 15:06:00 -04:00
Dan Funk
785918cb7f Be sure the validation process examines the data located in the documentation and correctly handles boolean fields. 2020-04-02 14:47:20 -04:00