Commit Graph

1920 Commits

Author SHA1 Message Date
Kelly McDonald 5f722d675f Add a function that gets runs via a background scheduler to look for any workflows that are in a 'waiting' state - it runs the update waiting tasks and does do_engine_steps
We have a test for the function that runs, but an assumption was made that the scheduler module has its own unit tests and we do not need to test that.

fixes #346
2021-06-09 10:42:34 -04:00
Dan fce9166c4a Do not require users to be admins for viewing the document directory tab. 2021-06-09 09:51:30 -04:00
Kelly McDonald 0d8d251e8e Temp save to test dev 2021-06-09 09:24:37 -04:00
Dan 232b92b39a upgrade Spiffworkflow. 2021-06-08 14:32:47 -04:00
Dan 286803d10b fixing a big stupid bug I created when merging all the code and making changes to the files. 2021-06-08 14:24:59 -04:00
Dan 50ad42d3a8 You have to mock out the protocol builder in tests that rely on it. 2021-06-08 12:36:47 -04:00
Dan 076d198fc6 fixing a failing test for study associate. 2021-06-08 12:18:16 -04:00
Dan 895e7867d2 Updating spiffworkflow. 2021-06-08 11:51:53 -04:00
Dan Funk 586a0f2f1a
Merge pull request #325 from sartography/feature/file_refactor
Prefer tasks that share a parent over just the the next available tas…
2021-06-08 11:28:23 -04:00
Dan 8d79fe9d94 Fixing failing tests, and now asserting that we only perform the post_process_form if we actually have a form. 2021-06-08 11:16:10 -04:00
Dan Funk 9c4994581d
Merge pull request #324 from sartography/modify-infinite-loop-312
Modify infinite loop #312
2021-06-08 10:30:13 -04:00
Dan Funk e10b210302
Merge pull request #323 from sartography/shield-test-issue-344
Shield test issue #344
2021-06-08 08:59:58 -04:00
Dan Funk a7b208f50a
Merge pull request #322 from sartography/data-store-refactor-330
Data store refactor #330
2021-06-08 08:58:53 -04:00
Dan Funk 6937c33719
Merge pull request #319 from sartography/datastore-file-endpoints-325
Datastore file endpoints #325
2021-06-08 08:54:43 -04:00
Dan Funk 37d4e7cc79
Merge pull request #318 from sartography/340-update_study_associate_change
Add test and fix to make sure that an empty study associates list (or…
2021-06-08 08:52:44 -04:00
Dan Funk c4a6fbb516
Merge pull request #317 from sartography/337-Data-Store-IRB-Code
337 partial fix
2021-06-08 08:51:09 -04:00
Dan Funk 5881c903ca
Merge pull request #316 from sartography/326-Multi_File_Data_Store
Make sure we are using the correct script engine
2021-06-08 08:49:43 -04:00
Dan Funk f9a0b0adee
Merge pull request #315 from sartography/get-dashboard-url-230
Fix for issue with get_dashboard_url #230
2021-06-08 08:48:37 -04:00
Dan Funk 710921cfe1
Merge pull request #314 from sartography/deprecate-study-info-protocol-261
Remove protocol from study_info script #261
2021-06-08 08:47:43 -04:00
Dan 59f605c3df Prefer tasks that share a parent over just the the next available task when returning the next_task in the workflow processor. 2021-06-08 08:03:14 -04:00
mike cullerton 9dc5871848 Added mocked PB data for tests using study_info script. 2021-06-07 10:08:44 -04:00
mike cullerton 70651e2a6a Test and BPMN files for testing 2021-06-04 11:45:51 -04:00
mike cullerton a3a485dd34 Changed do_task_validate_only so it returns a mocked value, instead of True/False.
True/False caused problems for workflow validations
2021-06-04 11:44:55 -04:00
mike cullerton 37ba46fb8f These tests now require PB Mock because of the validate_study_id changes 2021-06-03 14:30:00 -04:00
mike cullerton 9a63ab9c4f Change `do_task_validate_only` in study_info script to call the real do_task.
We do this so we can seed settings into the workflow for testing different scenarios using the study from validate_study_id
2021-06-03 14:28:24 -04:00
mike cullerton c41657301a Modify `test_spec` and `make_test_workflow` to accept new optional `validate_study_id` parameter.
Modify `make_test_workflow` to use study_id when creating test workflow for validation.
2021-06-03 14:22:26 -04:00
mike cullerton 0dfc96d7f6 Modified `validate_workflow_specification` to accept new optional `validate_study_id` parameter.
We then pass validate_study_id on to WorkflowService.test_spec
2021-06-03 14:19:41 -04:00
mike cullerton d657744816 Added optional `validate_study_id` parameter to the validation api endpoint. 2021-06-03 14:17:12 -04:00
mike cullerton a2e577829a Cleanup:
- removed unused imports
- removed testing print statement
2021-06-02 10:02:26 -04:00
mike cullerton 7f0d8a131d Import DataStoreBase from service now 2021-06-02 10:00:55 -04:00
mike cullerton 506b84a49a Import DataStoreBase from service now 2021-06-02 10:00:18 -04:00
mike cullerton e2e35b673d Moved data store code from script to service 2021-06-02 09:59:41 -04:00
mike cullerton 162dee45d3 Unused import 2021-06-01 16:34:21 -04:00
mike cullerton 200a5b3bf3 Updated tests for file datastore endpoint
Added test of 2 entries
2021-06-01 16:27:55 -04:00
mike cullerton ec8353aaa6 Test for new datastore file api endpoint 2021-06-01 13:51:40 -04:00
mike cullerton 2e3d8c7343 Fix for DataStoreSchema missing the file_id column.
The file_id column is a foreign key.
2021-06-01 13:51:10 -04:00
mike cullerton 1ed144536f New method for file datastore api endpoint 2021-06-01 13:50:04 -04:00
mike cullerton e9fe555e05 New `/datastore/file/{file_id}` endpoint definition 2021-06-01 13:49:21 -04:00
Kelly McDonald 8c04e228e9 Add test and fix to make sure that an empty study associates list (or a blank list) will effectively clear the extra study associates 2021-06-01 11:46:43 -04:00
Kelly McDonald a5d67bb245 337 partial fix
if the user calls the file_data_set function for a valid file with the key 'irb_code' and a value of a valid IRB document code, then we should set the irb code on the file.
2021-05-27 12:24:30 -04:00
Kelly McDonald acccf3b704 Make sure we are using the correct script engine 2021-05-26 10:50:20 -04:00
mike cullerton 1f67f55275 Fixed definition for FRONTEND and BPMN. I was overwriting the environmental variables. 2021-05-20 13:10:04 -04:00
mike cullerton 384da075ef Removed references to `protocol` from the description 2021-05-20 11:54:12 -04:00
Dan ef7ee284b2 Prefer tasks that share a parent over just the the next available task when returning the next_task in the workflow processor. 2021-05-19 16:26:16 -04:00
Dan 2caf548719 Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev 2021-05-18 09:53:24 -04:00
Dan e8810f36f2 Bumping Spiff version to correct issue with multi-instance script tasks. 2021-05-18 09:53:19 -04:00
Dan Funk 77f7fec5d4
Merge pull request #312 from sartography/study-is-none-329
Study is none #329
2021-05-14 16:33:04 -04:00
Mike Cullerton 668e2f4e3c
Merge pull request #313 from sartography/feature/add_file_data_store_properties_to_file
Assure that any data store values associated with a file come back as…
2021-05-14 16:30:35 -04:00
mike cullerton ce7c07679b SonarCloud 2021-05-14 15:52:30 -04:00
Dan 8e37f27399 Assure that any data store values associated with a file come back as a part of the get_study_data[documents
] endooint.
2021-05-14 15:52:25 -04:00