Commit Graph

511 Commits

Author SHA1 Message Date
Dan 7a8eeab820 Merge branch 'dev' into bug/missing_pi_name_246 2021-08-17 11:16:03 -04:00
Dan Funk c831ee7e4a
Merge pull request #357 from sartography/426-remove-hsr-number
remove hsr number #426
2021-08-17 09:58:56 -04:00
Dan 77de2a8f47 Merge branch 'dev' into bug/missing_pi_name_246 2021-08-17 09:47:09 -04:00
Dan 0a2597ae36 Just a quick hot fix so that when can still report errors back to the UI even when the task_data can't be serialized, which can happen when functions are defined. 2021-08-17 09:43:08 -04:00
nilez f8dd4c3eb9 Check Study Associates Endpoint 2021-08-16 09:32:02 -04:00
mike cullerton bd4a9cced3 We no longer use HSRNUMBER to automatically set Study Status to `Open for Enrollment` 2021-08-13 12:06:27 -04:00
nilez 4a2581e938 get studies raises and error when invalid studies are the only studies associated with the user 2021-08-12 14:03:44 -04:00
nilez 7027392a1b Merge remote-tracking branch 'origin/bug/missing_pi_name_246' into bug/missing_pi_name_246
# Conflicts:
#	crc/services/workflow_service.py
#	tests/study/test_study_associate_script.py
2021-08-12 13:01:41 -04:00
nilez e32c1db4c8 Merge remote-tracking branch 'origin/dev' into bug/missing_pi_name_246
# Conflicts:
#	crc/models/study.py
#	crc/services/study_service.py
#	crc/services/workflow_service.py
#	tests/study/test_study_associate_script.py
2021-08-12 12:59:15 -04:00
nilez 41e27cb454 Merge remote-tracking branch 'origin/dev' into bug/missing_pi_name_246
# Conflicts:
#	crc/models/study.py
#	crc/services/study_service.py
#	crc/services/workflow_service.py
#	tests/study/test_study_associate_script.py
2021-08-12 12:39:04 -04:00
nilez 2732071585 Merge branch 'dev' into bug/missing_pi_name_246 2021-08-12 12:07:25 -04:00
Dan 40727c7ce6 avoid erroring out when unable to calculate a value expression as a part of finding a default value. 2021-08-12 11:35:05 -04:00
Dan Funk adb1b74822
Merge pull request #352 from sartography/post-process-empty-field-408
Post process empty field #408
2021-08-12 10:53:26 -04:00
mike cullerton d07bac27ca Fix for hidden file data field.
We were processing a field that didn't have a value.
Ticket 408
2021-08-11 16:43:50 -04:00
Dan 318cd34f81 bouncing to fix a bug in SpiffWorkflow that was holding outo outdated data deed within the python_script_engine.
This caused validation to fail for valid repeat sections, so including a fix to allow that validation to continue.
2021-08-11 14:21:23 -04:00
Dan 848c2e622f Always use a schema to define what is being returned, it enforces consistency of the API and internally we can depend on well defined objects. 2021-08-10 16:16:08 -04:00
Dan 913c12c02d Merge branch 'dev' into bug/pi_name_missing_246 2021-08-10 15:06:52 -04:00
Kelly McDonald 960d302c03 Finish #367 - Make sure that we only use a primary_id if it is in the workflow that we are currently working on - otherwise it is a library and might have its own primary id. 2021-08-10 09:15:38 -04:00
Kelly McDonald 41ad7935f8 Merge branch 'dev' into 367-Call-Activity
# Conflicts:
#	Pipfile.lock
2021-07-29 09:28:21 -04:00
Kelly McDonald 217e61eed3 next_task returns the next available task, except when the task is completed when it returns the EndEvent -
The problem was that it was returning the first EndEvent it found, not the last one. This caused a problem when we had a CallActivity which has its own EndEvent.

Fixes #399
2021-07-27 09:19:08 -04:00
Dan Funk 25e00823a7
Merge pull request #342 from sartography/enum-file-data-375
Enum file data #375
2021-07-23 13:47:57 -04:00
mike cullerton 4c8a86f9bf Fixed bug where processing file data only worked for enums. 2021-07-23 11:24:17 -04:00
NWalker4483 38b8c7fcdf Fixed email_cc test 2021-07-22 15:08:28 -04:00
NWalker4483 a73d1794eb Fixed Associate API Endpoint description 2021-07-22 14:09:24 -04:00
Dan Funk 61504664d4
Merge pull request #346 from sartography/bug/346_timer_fails_to_send_email
fixes #346, allow emails to fire in scheduled events
2021-07-22 13:40:12 -04:00
Dan 2009a794ea We were depending on an active http request existing in order to fire emails, using that request to determine the front end url. We have the frontend url in our config file, and we don't have a request object when running scheduled tasks, so I just use our configuration setting instead. 2021-07-22 13:25:06 -04:00
mike cullerton 8df1145471 Modify the LDAP service to only use lowercase UIDs.
UVA always returns the UID as lowercase.
This caused a postgres unique value problem for us.
2021-07-22 10:46:09 -04:00
Kelly McDonald 2455495457 got library side working - still need to have parent working 2021-07-22 10:20:34 -04:00
NWalker4483 4632c6374f Merge branch 'dev' into bug/missing_pi_name_246
# Conflicts:
#	crc/api.yml
#	crc/services/study_service.py
2021-07-20 11:44:11 -04:00
mike cullerton 354e20c34b Use the data_store_service to set the data_store, rather than access DB directly.
Pass the label explicitly (as the value)
2021-07-15 13:09:40 -04:00
Dan dd67a5e650 Never set the date to datetime.utcnow() on DateTime fields. We want this to fall back on the func.now() method and allow the database to set the time on insert. 2021-07-12 15:58:32 -04:00
Mike Cullerton 522ca9d164
Merge pull request #340 from sartography/bug/better_errors_on_scheduled_tasks
Assure we log reasonably clear errors when executing scheduled tasks …
2021-07-12 10:13:02 -04:00
Mike Cullerton d1bf370a39
Merge pull request #339 from sartography/restrict-loaded-studies-374
Restrict loaded studies #374
2021-07-12 10:11:34 -04:00
Mike Cullerton 7070761089
Merge pull request #338 from sartography/document-spreadsheet-name-380
Document spreadsheet name #380
2021-07-12 10:11:16 -04:00
Dan f982745d32 fixing a failing test, don't assume the study and workflow ids will always be 1. 2021-07-12 10:00:39 -04:00
Dan 1916c4ff54 Assure we log reasonably clear errors when executing scheduled tasks in the background, so that sentry can pick them up and they can be addressed effectively. 2021-07-12 09:43:12 -04:00
mike cullerton dad2de9f0c get_user_studies now checks study_details['REVIEW_TYPE'] before displaying a study.
This corresponds to REVIEWTYPENAME being `Full Committee`, `Expedited`, `Non-UVA IRB Full Board`, or `Non-UVA IRB Expedited`
2021-07-09 10:37:25 -04:00
Kelly McDonald 79c69037dd Filter out Library categories from the list returned 2021-07-08 08:57:40 -04:00
mike cullerton d6f9b013f7 Change `irb_documents` to `documents` 2021-07-07 12:54:03 -04:00
mike cullerton 23180908c8 Undo change. Wrong branch 2021-07-07 12:43:51 -04:00
mike cullerton c39e08972d Change irb_documents to documents 2021-07-07 12:42:01 -04:00
Dan Funk 3c52453c26
Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:35:24 -04:00
Dan Funk 2ed436327f
Merge pull request #333 from sartography/check-study-script-273
Check study script #273
2021-07-07 11:28:32 -04:00
Dan Funk db9b228735
Merge pull request #334 from sartography/WaitingEventsHotPatch
Make a change so that anything that has a waiting event is labeled in…
2021-07-07 11:27:10 -04:00
Dan 2a45f2fcda Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:24:00 -04:00
mike cullerton b0cf74fa3d Merge branch 'dev' into add-by-user-61
# Conflicts:
#	tests/files/test_files_api.py
2021-07-07 10:46:50 -04:00
Dan fb54edac1c Adding additional details to error messages, and cleaning up the cruft around these messages to keep them clear and succinct.
Most noteable is the addition of the line on which the error occurs for script tasks.  It will report the line number and pass back the content of
the line that failed.
The validator only returns the first error it encounters, as it's clear that all we ever get right now is two of the same error.
Did a lot of work between this and spiffworkflow to remove all the places where we obfuscate or drop details as we converted between workflowExceptions and APIExceptions.
Dropped the python levenshtein dependency, in favor of just rolling a simple one ourselves in Spiffworkflow.
2021-07-07 00:53:49 -04:00
mike cullerton 894377a607 Add user_uid to FileDataModel calls 2021-07-06 17:09:00 -04:00
Dan a9805ad40c Adding some documentation for clarity. 2021-07-06 14:40:20 -04:00
Dan 7aa4b0833c Merge remote-tracking branch 'origin/dev' into feature/documents_xls_refactor 2021-07-06 13:11:08 -04:00