mike cullerton
86f3c369a0
Picking nits
2022-05-06 14:13:25 -04:00
mike cullerton
d8ae719489
We don't need to run _update_status_of_workflow_meta any more
...
But, it returned warnings to the front end for debugging
Ticket 733 was created to address this.
Fix the warnings and return them again.
This also broke the tests in test_study_status_message, so we skip them for now
2022-05-06 14:13:02 -04:00
jasquat
a2388d517e
set pg pass globally w/ burnettk
2022-05-06 14:10:50 -04:00
jasquat
d4dcda346f
we must set a password w/ burnettk
2022-05-06 14:09:42 -04:00
mike cullerton
c28e9a5bdd
Make sure we update workflow state when processing the master workflow
2022-05-06 14:09:23 -04:00
jasquat
ed25de188e
connect to correct postrgres host w/ burnettk
2022-05-06 14:06:47 -04:00
mike cullerton
092b71f341
Change workflow_state to state
2022-05-06 14:06:05 -04:00
mike cullerton
b13aac84e7
Change workflow_state to state
2022-05-06 14:02:11 -04:00
jasquat
8ad09b3a0c
try using postgres service w/ burnettk
2022-05-06 14:01:52 -04:00
jasquat
50e3bdce9b
attempt to run tests in github actions instead of travis w/ burnettk
2022-05-06 13:56:19 -04:00
jasquat
a0c0a04b84
use python 3.9 w/ burnettk
2022-05-06 09:54:27 -04:00
mike cullerton
9b65c46eeb
Workflow for new test
2022-05-06 09:24:17 -04:00
mike cullerton
830a929a6b
New test - make sure we do not update tasks if the workflow is locked.
2022-05-06 09:23:39 -04:00
mike cullerton
7e2d18f026
no message
2022-05-06 08:57:01 -04:00
mike cullerton
e8c5ec1af5
Add is_locked to Task API object
2022-05-06 08:54:57 -04:00
mike cullerton
20a21b9267
Add workflow_state to processor_to_workflow_api method
...
Add new method to update workflow_state from master workflow
2022-05-06 08:53:54 -04:00
mike cullerton
5e7f226b4e
Add workflow_state to Workflow and WorkflowApi models/schemas
2022-05-06 08:51:37 -04:00
mike cullerton
d91fa9e095
Don't update task if workflow is locked, hidden, or disabled
2022-05-06 08:49:20 -04:00
jasquat
00302501d7
use pipenv in the Dockerfile
2022-05-05 19:46:21 -04:00
jasquat
a6bc3818ac
use poetry in Dockerfile instead of pipenv
2022-05-05 14:03:51 -04:00
jasquat
2b5f7c2166
remove unneeded docker run command in favor of docker compose
2022-05-05 13:40:59 -04:00
jasquat
6e46115d9d
added poetry files and updated postrgres to work from root of repo w/ burnettk
2022-05-04 16:43:12 -04:00
Dan Funk
dd33936dcf
Merge pull request #530 from sartography/bug/complete-template-issue-730
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Bug/complete template issue #730
2022-05-04 10:21:03 -04:00
Dan Funk
8e2fa44b0b
Merge pull request #532 from sartography/add-tool-versions
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add .tool-versions file to document working version and recommend version for python
2022-05-04 08:10:53 -04:00
burnettk
15419d729c
add tool-versions file to document and recommend python version
2022-05-03 17:33:10 -04:00
mike cullerton
128c516494
Reminder to delete this method after the code is migrated to WorkflowService.update_workflow_state_from_master_workflow
2022-04-29 17:45:38 -04:00
mike cullerton
edd53fccb0
Add workflow_state to WorkflowMetadata
2022-04-29 17:41:52 -04:00
mike cullerton
0d7b26423c
*** WIP ***
...
Skeleton for updating the workflows in a separate call
2022-04-29 17:40:30 -04:00
mike cullerton
dd2e8ef32f
We ran the get_master_spec method twice, instead of using the value in master_spec the second time
2022-04-29 17:36:15 -04:00
mike cullerton
7d29ac75de
add workflow_state column to WorkflowModel
2022-04-29 17:30:38 -04:00
Dan Funk
6cd8d3d27b
Merge pull request #528 from sartography/document-history-695
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document history fix #695
2022-04-29 12:56:31 -04:00
Dan Funk
64bbec99e3
Merge pull request #527 from sartography/email-name-parameter-726
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Email name parameter #726
2022-04-29 12:55:44 -04:00
mike cullerton
7e480fc24b
Cleaned up tests around adding a file
2022-04-29 11:34:05 -04:00
mike cullerton
4c1ed88a0e
Cleaned up if condition logic
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We weren't always creating the new file
2022-04-29 11:33:21 -04:00
mike cullerton
05b7bd33a5
We don't have a modified date here, so use the creation date
2022-04-28 16:43:00 -04:00
mike cullerton
ca1c60488e
Add test for name in the get_email_data script
2022-04-28 15:37:01 -04:00
mike cullerton
608e3c653c
Assert that we return name in the EmailModelSchema
2022-04-28 15:19:04 -04:00
mike cullerton
4e4c36bb50
Add name to the EmailModelSchema
2022-04-28 15:18:03 -04:00
Dan Funk
c0e17c13c9
Merge pull request #526 from sartography/feature/better_errors
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Re-add value expression, ad the default-value is not good enough. so…
2022-04-27 16:18:49 -04:00
Dan Funk
fc3c1c5c4e
Merge pull request #525 from sartography/new-progress-status
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New progress status #721
2022-04-27 16:18:34 -04:00
Dan
8da31874f9
Merge branch 'dev' into new-progress-status
2022-04-27 16:17:15 -04:00
Dan
f5c0008b1b
Merge remote-tracking branch 'origin/dev' into new-progress-status
2022-04-27 16:16:38 -04:00
Dan Funk
83f10e16cd
Merge pull request #524 from sartography/email-name-parameter-726
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Email name parameter #726
2022-04-27 16:16:08 -04:00
Dan
cd3e74a3f2
Merge branch 'dev' into email-name-parameter-726
2022-04-27 16:13:32 -04:00
Dan
8851ffd4c2
Merge branch 'dev' into email-name-parameter-726
2022-04-27 16:13:16 -04:00
Dan Funk
b07fc0f85b
Merge pull request #523 from sartography/document-history-695
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Document history #695
2022-04-27 13:28:22 -04:00
Dan
d8a73632e7
Merge branch 'dev' into document-history-695
2022-04-27 13:21:40 -04:00
Dan
4d9e17986d
Merge branch 'dev' into document-history-695
2022-04-27 13:19:53 -04:00
Dan Funk
04d3b728a4
Merge pull request #520 from sartography/file-refactor-705
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File refactor #705
2022-04-27 12:54:46 -04:00
Dan
4d57b68da0
fixing a migration so it won't error out on us, and updating the little postgres connect script to connect via docker and avoid command line client version differences.
2022-04-27 12:54:32 -04:00
