Dan Funk
7806c1e4ed
Merge pull request #44 from sartography/master
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Master to Testing
2020-05-12 16:40:53 -04:00
Dan Funk
13c16ec179
Merge pull request #43 from sartography/feature/bug_fixes
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Found a number of bugs with the parallel multi-instance - pulling in …
2020-05-12 14:39:52 -04:00
Aaron Louie
77b1908373
Escapes dot characters in CORS domains
2020-05-12 14:27:17 -04:00
Aaron Louie
ac3f0b401b
Converts list of allowed origins to regexes
2020-05-12 12:23:47 -04:00
Dan Funk
e723992fde
Found a number of bugs with the parallel multi-instance - pulling in some recent changes from Spiffworkflow to open things up a bit more to allow functional jumping between tasks.
2020-05-12 12:23:43 -04:00
Aaron Louie
73ce70b574
Allows CORS connections from frontend
2020-05-12 10:43:52 -04:00
Aaron Louie
820bc23841
Merge branch 'master' into dev
2020-05-12 10:22:49 -04:00
Dan Funk
e043a5ff63
Merge pull request #38 from sartography/feature/investigators_reference_file
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Adding a new reference file that provides greater details about the i…
2020-05-12 10:01:48 -04:00
Dan Funk
e3573bb7df
Really just flailing now as I try to get tests to pass in Jenkins when they all work just fine on my box.
2020-05-12 08:48:26 -04:00
Dan Funk
99503fb832
missed a file in the last commit.
2020-05-11 17:42:24 -04:00
Dan Funk
b7c11fd893
Merge branch 'master' into feature/investigators_reference_file
2020-05-11 17:36:37 -04:00
Dan Funk
420d4af5b5
Merge branch 'master' into feature/investigators_reference_file
2020-05-11 17:10:57 -04:00
Dan Funk
182162540a
Merge pull request #42 from sartography/feature/new_script_engine
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Updated to use the latest script engine / evaluation engine that crea…
2020-05-11 17:09:54 -04:00
Dan Funk
02f8764056
Updated to use the latest script engine / evaluation engine that creates a single location where all values used in BPMN/DMN are processed. Right now this is a python based interpreter, but we will eventually base this on FEEL expressions.
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The validation process needs to take the api model into account so we catch errors with bad file names.
2020-05-11 17:04:05 -04:00
Aaron Louie
02118800ca
Prints out LDAP URL
2020-05-11 16:22:42 -04:00
Aaron Louie
d8f7b6cc9f
Adds dev, demo, and training branches
2020-05-11 12:05:16 -04:00
Aaron Louie
27d8e0b51b
Merge pull request #41 from sartography/staging
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Staging
2020-05-08 20:37:46 -04:00
Aaron Louie
b27cad8233
Merge pull request #40 from sartography/testing
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Testing
2020-05-08 18:09:36 -04:00
Aaron Louie
9cb1a23a28
Merge pull request #39 from sartography/chore/github_branches_to_docker_tags
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Chore/GitHub branches to docker tags
2020-05-07 16:47:45 -04:00
Dan Funk
c34000d369
Merge branch 'master' into feature/investigators_reference_file
2020-05-07 16:47:24 -04:00
Aaron Louie
a1ad11c07d
Cleans up debugging stuff
2020-05-07 14:27:32 -04:00
Aaron Louie
06f14daa86
Fixes commit substring syntax
2020-05-07 14:24:15 -04:00
Aaron Louie
fceda2c796
Tries defining commit in deploy script
2020-05-07 14:14:25 -04:00
Dan Funk
da7cae51b8
Adding a new reference file that provides greater details about the investigators related to a study.
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Improving the study_info script documentation to provide detailed examples of values returned based on arguments.
Making the tests a little more targetted and less subject to breaking through better mocks.
Allow all tests to pass even when ther protocol builder mock isn't running locally.
Removing the duplication of reference files in tests and static, as this seems silly to me at the moment.
2020-05-07 13:57:24 -04:00
Aaron Louie
9af91bed8b
Printing out some stuff for debugging
2020-05-07 13:49:17 -04:00
Aaron Louie
7463664ae0
Merge pull request #37 from sartography/chore/github_branches_to_docker_tags
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Chore/GitHub branches to docker tags
2020-05-07 11:43:04 -04:00
Aaron Louie
5c510c5a9a
Moves PB_BASE_URL into matrix env var
2020-05-07 10:56:09 -04:00
Aaron Louie
559494aee2
Fails build if any docker or aws command errors out
2020-05-07 10:47:24 -04:00
Aaron Louie
9ba00c1320
Moves commit var back up to global
2020-05-07 10:42:19 -04:00
Aaron Louie
f4e293e8fa
Merge pull request #36 from sartography/chore/github_branches_to_docker_tags
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Builds and deploys Docker image if build passes on testing, staging, …
2020-05-07 10:35:37 -04:00
Aaron Louie
26251a199f
Moves commit variable into deploy script
2020-05-07 10:25:06 -04:00
Aaron Louie
827e840103
Builds and deploys Docker image if build passes on testing, staging, or master branches
2020-05-07 10:15:14 -04:00
Aaron Louie
9afcd753c4
No longer requires task_id
2020-05-06 14:27:28 -04:00
Dan Funk
1eb52ed268
Removing duplicate migration.
2020-05-06 13:28:41 -04:00
Dan Funk
1571986c0e
I had to give up and live with the idea that we can only render documentation on the current task, not on the previous or next tasks. I think this is ok. If you want to view a task, you need to make it the active task to assure all the parts and pieces are in place.
2020-05-06 13:01:38 -04:00
Dan Funk
8ded625c7d
Merge remote-tracking branch 'origin/chore/update_specs' into feature/previous_task
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# Conflicts:
# Pipfile.lock
Assuring that all documents from the xls spreadsheet are loaded when doing validations.
Fixing some failed tests.
2020-05-06 11:46:19 -04:00
Dan Funk
07e58e923d
Merge remote-tracking branch 'origin/chore/update_specs' into feature/previous_task
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# Conflicts:
# Pipfile.lock
Assuring that all documents from the xls spreadsheet are loaded when doing validations.
2020-05-06 11:25:50 -04:00
Dan Funk
9629b36e92
Setting JSON_SORT_KEYS to false, assuring that Flask does not resort all data returned to the front end.
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Updating Spiff Workflow which has some critical behavioral changes around MultiInstance.
2020-05-06 10:59:49 -04:00
Aaron Louie
6c36a32411
Adds DSP
2020-05-06 10:37:43 -04:00
Aaron Louie
a8827d78c4
Fixes typo
2020-05-05 20:49:07 -04:00
Aaron Louie
4ecb0cb3a3
Updates BPMN files
2020-05-05 16:15:38 -04:00
Dan Funk
ce76b0d3e8
Merge branch 'feature/protocol_status' into feature/previous_task
2020-05-04 11:12:12 -04:00
Dan Funk
714b5f3be0
Merge branch 'feature/protocol_status' into feature/previous_task
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# Conflicts:
# crc/services/study_service.py
2020-05-04 11:08:36 -04:00
Dan Funk
2699f5c65c
Refactor the stats models, and assure they are very correct across all tests with the workflow api.
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I noticed we were saving the workflow every time we loaded it up, rather than only when we were making changes to it. Refactored this to be a little more careful.
Centralized the saving of the workflow into one location in the processor, so we can make sure we update all the details about that workflow every time we save.
The workflow service has a method that will log any task action taken in a consistent way.
The stats models were removed from the API completely. Will wait for a use case for dealing with this later.
2020-05-04 10:57:09 -04:00
Aaron Louie
28d5727851
Merge branch 'master' into feature/protocol_status
2020-05-01 22:55:59 -04:00
Aaron Louie
098cf10926
Fixes Jinja code to match new structure of StudyInfo documents
2020-05-01 22:49:52 -04:00
Aaron Louie
6a96ccffa2
Updates pipenv hashes. Fixes typo in SpiffWorkflow file name
2020-05-01 21:54:01 -04:00
Dan Funk
1f5002680a
Initial work on a "Previous" task.
2020-05-01 12:11:39 -04:00
Dan Funk
7c743d65ed
Adding tests around parallel which pass great, but ran into a bug down in Spiff that I'm passing back to Kelly with a test in that repo. More coming on this.
2020-04-30 15:39:11 -04:00
Dan Funk
bec59a71d7
Deleteing stuff is a damn mess, but this is a little cleaner.
2020-04-29 16:07:39 -04:00
