Dan Funk
|
1a9b5b50e5
|
Merge branch 'master' of github.com:sartography/cr-connect-workflow
|
2020-02-18 16:39:11 -05:00 |
|
Dan Funk
|
a642593e3d
|
Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
|
2020-02-18 16:38:56 -05:00 |
Aaron Louie
|
6075a32d07
|
Edits default value
|
2020-02-18 10:17:14 -05:00 |
|
Aaron Louie
|
16db1e3504
|
Adds default_value to Task schema
|
2020-02-18 10:14:03 -05:00 |
|
Aaron Louie
|
386df9e912
|
Generates coverage data
|
2020-02-12 11:31:02 -05:00 |
|
Aaron Louie
|
3cd27c3410
|
Switches back to last-known working config. Installs coverage.
|
2020-02-12 11:20:54 -05:00 |
|
Aaron Louie
|
7855bed328
|
Python 3.7 isn't available anymore on Travis CI trusty? Defaults to Python 3.6.1
|
2020-02-12 11:14:04 -05:00 |
|
Aaron Louie
|
5a53ddb88c
|
Fixes vulnerability identified by SonarCloud
|
2020-02-12 11:07:01 -05:00 |
|
Aaron Louie
|
0664fec141
|
Generates coverage.xml report
|
2020-02-12 11:04:04 -05:00 |
|
Aaron Louie
|
a5894b1745
|
Removes sonar token
|
2020-02-12 10:42:00 -05:00 |
|
Aaron Louie
|
8322713ea6
|
Running sonar from Travis CI
|
2020-02-12 10:31:08 -05:00 |
|
Aaron Louie
|
6408e45093
|
Trying to get sonar to run properly
|
2020-02-12 10:21:00 -05:00 |
|
Aaron Louie
|
5f461d9e87
|
Fixes FactService
|
2020-02-11 22:13:46 -05:00 |
Aaron Louie
|
a69c709bd1
|
Merge pull request #8 from sartography/feature/crc_demo_workflows
Feature/crc demo workflows
|
2020-02-11 15:20:22 -05:00 |
|
Aaron Louie
|
b0b1a6e5e8
|
Saves form field key
|
2020-02-11 15:03:25 -05:00 |
|
Aaron Louie
|
0a3a932c50
|
Comments out study workflow for now. Fixes failing unit tests.
|
2020-02-11 13:40:14 -05:00 |
|
Aaron Louie
|
0ef1a178ed
|
Merge branch 'master' into feature/crc_demo_workflows
|
2020-02-11 13:30:57 -05:00 |
|
Aaron Louie
|
f58ed5b6ee
|
Adds another user task at the end
|
2020-02-11 12:14:10 -05:00 |
|
Dan Funk
|
709bae76b2
|
Removing a rogue comma that was causing havoc. Also, don't fail if a mock already exists in the test database.
|
2020-02-11 11:11:21 -05:00 |
|
Dan Funk
|
879a248002
|
Adding a test to assure the file creation occurs as expected via the API.
|
2020-02-10 20:54:22 -05:00 |
|
Aaron Louie
|
359fb4a2f3
|
Adds draft demo workflow specs
|
2020-02-10 17:19:11 -05:00 |
|
Aaron Louie
|
f128e7206b
|
Adds placeholder scripts for testing
|
2020-02-10 17:18:51 -05:00 |
|
Dan Funk
|
9f0eb8477a
|
Fix for a bug in the File service where it was being overly restrictive.
|
2020-02-10 16:27:57 -05:00 |
|
Dan Funk
|
1d24ebe382
|
Provide a script for generating word documents from template files. Refractored file managment into a service to make it easier to programatically add files. Modified the workflow_processor to inject the study_id and workflow_id into the running workflow so that this meta-information is avialable at the task level.
|
2020-02-10 16:19:23 -05:00 |
|
Aaron Louie
|
fd9c685979
|
Handles processes with multiple top-level elements
|
2020-02-10 15:20:45 -05:00 |
|
Aaron Louie
|
b63ad7f707
|
Adds new token
|
2020-02-10 10:03:21 -05:00 |
|
Aaron Louie
|
ba2fe6c740
|
Adds sonar properties
|
2020-02-08 14:00:37 -05:00 |
|
Aaron Louie
|
f142d02a30
|
Adds workflow_spec_id back in to WorkflowApi
|
2020-02-07 12:36:08 -05:00 |
|
Dan Funk
|
eae6c8dd1a
|
update to last commit, left an extra column on workflow model that does not need to exist.
|
2020-02-07 11:57:48 -05:00 |
|
Dan Funk
|
e1148e1b3d
|
Merge branch 'master' of github.com:sartography/cr-connect-workflow
|
2020-02-07 11:34:57 -05:00 |
|
Dan Funk
|
9bd93748be
|
Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
|
2020-02-07 11:34:44 -05:00 |
|
Aaron Louie
|
13604167fd
|
Adds command line option to reset database
|
2020-02-06 21:08:49 -05:00 |
|
Aaron Louie
|
9fb3a96a50
|
Fixes instance path
|
2020-02-06 14:36:02 -05:00 |
|
Aaron Louie
|
d51935244c
|
Trivial change to force travis docker push
|
2020-02-06 11:18:23 -05:00 |
|
Dan Funk
|
349dac6e44
|
Fixing more stupid mistakes in the docker file.
|
2020-02-06 09:45:37 -05:00 |
|
Dan Funk
|
42ce7aaf07
|
Fixing more stupid mistakes in the docker file.
|
2020-02-06 09:45:24 -05:00 |
|
Dan Funk
|
04e8ae37a9
|
Grosly idiotoic mistakes happen when I do devops.
|
2020-02-06 09:41:44 -05:00 |
|
Dan Funk
|
7809de7706
|
Merge branch 'master' of github.com:sartography/cr-connect-workflow
|
2020-02-06 09:05:49 -05:00 |
|
Dan Funk
|
08da6eef62
|
Scripts should be executable.
|
2020-02-06 09:02:02 -05:00 |
|
Aaron Louie
|
71dac70e1f
|
Updates list of allowed files. Removes unnecessary migrations. Note this will require a full wipe & reset of the database to work.
|
2020-02-05 17:23:37 -05:00 |
|
Dan Funk
|
8327e2bb22
|
Again...
|
2020-02-05 17:14:29 -05:00 |
|
Dan Funk
|
55261d634e
|
A few additional scripts to get deployments to work on staging.
|
2020-02-05 17:07:34 -05:00 |
|
Dan Funk
|
78ba9b4949
|
Moving back to a travis that works.
|
2020-02-05 17:02:20 -05:00 |
|
Dan Funk
|
a8d2bd1df5
|
one more time at travis.
|
2020-02-05 16:36:52 -05:00 |
|
Dan Funk
|
af2f710ff4
|
Build and test the docker container.
|
2020-02-05 16:29:34 -05:00 |
|
Dan Funk
|
589b79e7fb
|
Mis-spelling something stupid, more fixing of travis.
|
2020-02-05 16:22:47 -05:00 |
|
Dan Funk
|
087982e4c4
|
Updates in travis to do a push to docker hub, so our code can be deployed to various environments.
|
2020-02-05 15:53:52 -05:00 |
|
Dan Funk
|
f913107d2e
|
Another fix to travis config.
|
2020-02-05 15:28:41 -05:00 |
|
Dan Funk
|
f611c16b57
|
Another fix to travis config.
|
2020-02-05 15:26:08 -05:00 |
|
Dan Funk
|
d1c32c0aaa
|
Travis configuration for connecting to postgres.
|
2020-02-05 15:17:47 -05:00 |