Commit Graph

1992 Commits

Author SHA1 Message Date
Dan 07eb3f9ca8 Moving metrics into SpiffWorkflow so we can run the performance metrics deeply across both systems simultaniously.
Upgrading libraries.
Fixing deprication issue with Pandas and numpy.
We can only process xlsx files now, plain oldschool xls is fully removed.
2021-06-18 16:41:55 -04:00
NWalker4483 4ca94b39ce Merge branch 'dev' of https://github.com/sartography/cr-connect-workflow into partial_testing 2021-06-17 15:12:28 -04:00
Dan Funk 19d63e2aa2
Merge pull request #328 from sartography/restart-workflow-programmatically-347
Restart workflow programmatically #347
2021-06-17 10:36:46 -04:00
Dan Funk f2ec620794
Merge pull request #329 from sartography/bug/356_duplicate_workflow
delete workflow after validating
2021-06-17 10:27:47 -04:00
Dan a4caae8d64 when validating, we need to take every step to remove the workflows we create during the validation. 2021-06-16 14:40:20 -04:00
Dan acae6030f5 The API for evaluating python expressions should not raise an error, it can simply return a result of false, and provide an error to explain the problem. In this way the front end doesn't error out when it's running the script tasks but doesn't have enough information to get a valid response back.
The validation should take into account that repeating sections must be evaluated in the context of the data within the repeating section, not outside of it.
2021-06-15 16:17:15 -04:00
mike cullerton 94e730d04e Test script validation 2021-06-15 11:15:31 -04:00
mike cullerton 8db4199d73 Separate workflows for `using` the script and `validating` the script. 2021-06-15 11:15:04 -04:00
mike cullerton 02949dc6e2 WorkflowProcessor handles this error 2021-06-15 11:12:50 -04:00
mike cullerton addf1cab5b Added tests for failing conditions 2021-06-15 10:30:18 -04:00
NWalker4483 5c5b966bc4 Merge branch 'dev' of https://github.com/sartography/cr-connect-workflow into partial_testing 2021-06-15 09:11:18 -04:00
mike cullerton 9e20025f33 Test and workflow for reset_workflow 2021-06-15 08:37:42 -04:00
mike cullerton c8f8888c17 Script to reset workflow. Requires workflow spec name. 2021-06-14 14:51:16 -04:00
Dan 738a984dcd Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev 2021-06-11 17:21:47 -04:00
Dan 879d6e1df3 missed a critical change on the backend with the recent file updates, this assures that we properly handle repeating sections during the post process,
and we update the file doc code in those repeating sections.
2021-06-11 17:20:25 -04:00
Dan Funk 508c265952
Merge pull request #327 from sartography/feature/file_refactor_2
modified the tools api to return the expression and data with the res…
2021-06-11 16:30:55 -04:00
Dan 7282419174 modified the tools api to return the expression and data with the result, making it easier to cash results on the front end, This should help drastically reduce the calls to the python_eval from the front end.
The post processors for form submissions needs to take repeating sections into account, or it won't find the files it is looking for.
2021-06-11 08:27:50 -04:00
Kelly McDonald 394906d840 Add refresh_waiting_tasks to the processor do_engine_steps so that if we have a waiting task that has met its condition prior to the scheduler running, it will go ahead and proceed 2021-06-10 08:33:24 -04:00
NWalker4483 e1a4a79b03 Added Partial Workflow spec 2021-06-09 15:21:21 -04:00
NWalker4483 2364c240b2 Error Text Changed 2021-06-09 14:54:43 -04:00
NWalker4483 338fe30984 Merge branch 'dev' of https://github.com/sartography/cr-connect-workflow into partial_testing 2021-06-09 14:32:01 -04:00
NWalker4483 17077be701 exit at task 2021-06-09 12:40:38 -04:00
Kelly McDonald 5f722d675f Add a function that gets runs via a background scheduler to look for any workflows that are in a 'waiting' state - it runs the update waiting tasks and does do_engine_steps
We have a test for the function that runs, but an assumption was made that the scheduler module has its own unit tests and we do not need to test that.

fixes #346
2021-06-09 10:42:34 -04:00
Dan fce9166c4a Do not require users to be admins for viewing the document directory tab. 2021-06-09 09:51:30 -04:00
Kelly McDonald 0d8d251e8e Temp save to test dev 2021-06-09 09:24:37 -04:00
Dan 232b92b39a upgrade Spiffworkflow. 2021-06-08 14:32:47 -04:00
Dan 286803d10b fixing a big stupid bug I created when merging all the code and making changes to the files. 2021-06-08 14:24:59 -04:00
Dan 50ad42d3a8 You have to mock out the protocol builder in tests that rely on it. 2021-06-08 12:36:47 -04:00
Dan 076d198fc6 fixing a failing test for study associate. 2021-06-08 12:18:16 -04:00
Dan 895e7867d2 Updating spiffworkflow. 2021-06-08 11:51:53 -04:00
Dan Funk 586a0f2f1a
Merge pull request #325 from sartography/feature/file_refactor
Prefer tasks that share a parent over just the the next available tas…
2021-06-08 11:28:23 -04:00
Dan 8d79fe9d94 Fixing failing tests, and now asserting that we only perform the post_process_form if we actually have a form. 2021-06-08 11:16:10 -04:00
Dan Funk 9c4994581d
Merge pull request #324 from sartography/modify-infinite-loop-312
Modify infinite loop #312
2021-06-08 10:30:13 -04:00
Dan Funk e10b210302
Merge pull request #323 from sartography/shield-test-issue-344
Shield test issue #344
2021-06-08 08:59:58 -04:00
Dan Funk a7b208f50a
Merge pull request #322 from sartography/data-store-refactor-330
Data store refactor #330
2021-06-08 08:58:53 -04:00
Dan Funk 6937c33719
Merge pull request #319 from sartography/datastore-file-endpoints-325
Datastore file endpoints #325
2021-06-08 08:54:43 -04:00
Dan Funk 37d4e7cc79
Merge pull request #318 from sartography/340-update_study_associate_change
Add test and fix to make sure that an empty study associates list (or…
2021-06-08 08:52:44 -04:00
Dan Funk c4a6fbb516
Merge pull request #317 from sartography/337-Data-Store-IRB-Code
337 partial fix
2021-06-08 08:51:09 -04:00
Dan Funk 5881c903ca
Merge pull request #316 from sartography/326-Multi_File_Data_Store
Make sure we are using the correct script engine
2021-06-08 08:49:43 -04:00
Dan Funk f9a0b0adee
Merge pull request #315 from sartography/get-dashboard-url-230
Fix for issue with get_dashboard_url #230
2021-06-08 08:48:37 -04:00
Dan Funk 710921cfe1
Merge pull request #314 from sartography/deprecate-study-info-protocol-261
Remove protocol from study_info script #261
2021-06-08 08:47:43 -04:00
Dan 59f605c3df Prefer tasks that share a parent over just the the next available task when returning the next_task in the workflow processor. 2021-06-08 08:03:14 -04:00
mike cullerton 9dc5871848 Added mocked PB data for tests using study_info script. 2021-06-07 10:08:44 -04:00
mike cullerton 70651e2a6a Test and BPMN files for testing 2021-06-04 11:45:51 -04:00
mike cullerton a3a485dd34 Changed do_task_validate_only so it returns a mocked value, instead of True/False.
True/False caused problems for workflow validations
2021-06-04 11:44:55 -04:00
mike cullerton 37ba46fb8f These tests now require PB Mock because of the validate_study_id changes 2021-06-03 14:30:00 -04:00
mike cullerton 9a63ab9c4f Change `do_task_validate_only` in study_info script to call the real do_task.
We do this so we can seed settings into the workflow for testing different scenarios using the study from validate_study_id
2021-06-03 14:28:24 -04:00
mike cullerton c41657301a Modify `test_spec` and `make_test_workflow` to accept new optional `validate_study_id` parameter.
Modify `make_test_workflow` to use study_id when creating test workflow for validation.
2021-06-03 14:22:26 -04:00
mike cullerton 0dfc96d7f6 Modified `validate_workflow_specification` to accept new optional `validate_study_id` parameter.
We then pass validate_study_id on to WorkflowService.test_spec
2021-06-03 14:19:41 -04:00
mike cullerton d657744816 Added optional `validate_study_id` parameter to the validation api endpoint. 2021-06-03 14:17:12 -04:00