Commit Graph

212 Commits

Author SHA1 Message Date
Aaron Louie 7f0b35ff27 Merge branch 'dev' into feature/enum_lookup_data 2020-07-10 10:27:51 -04:00
Dan Funk ff7c30b879
Merge pull request #138 from sartography/fix/cleanup_todos
Cleanup pending  TODOs
2020-07-10 08:26:47 -04:00
Dan Funk 6a79fb3581 There may be multiple investigators of the same type that come back from the protocol builder, adding some tests and additional code to handle this, but still keep the list flat, currently appends a number to the investigator type when there is more than one. 2020-07-07 17:16:33 -04:00
Carlos Lopez 64f9bd2ca7 Tiny leftover 2020-07-07 08:38:33 -06:00
Carlos Lopez b4e127b3b7 Cleaning properly previous versions 2020-07-07 08:32:41 -06:00
Carlos Lopez a302208890 Updating test for study with approvals 2020-07-07 08:32:41 -06:00
Carlos Lopez c7b864f9c7 Cleaning up old notes 2020-07-07 08:32:20 -06:00
Aaron Louie 517cd8fc91 Merge branch 'dev' into feature/enum_lookup_data 2020-07-06 16:31:19 -04:00
Dan Funk bb4000ff6d Don't attept to load up the workflows for abandoned studies. 2020-07-06 16:01:43 -04:00
Dan Funk 8a66128189 Bug fixes after bumping the version of Spiffworlflow to the latest - which has fixes for sequential multi-instance. 2020-07-06 15:34:24 -04:00
Dan Funk 419c05e46c
Merge branch 'dev' into fix/more-info-in-exceptions 2020-07-06 12:51:24 -04:00
Dan Funk a5cef8775e * Modifying the StudyInfo script to return both "investigators" and "roles", the investigators argument will return only the current active investigators according to the protocol builder. The "roles" argument returns all possible roles - it is what "investigators" use to be.
* The Task.title returned to the front end will now attempt to process the "display_name" property for dot-notation syntax, making it possible to use this for multi-instance tasks,
  but will work in all cases where we want he title to change based on values in the data model.
* Fixing a bug the test_study_api where it wasn't updated when we made recent changes to the different states of a study.
*
2020-07-06 12:09:21 -04:00
Aaron Louie 1d9fef380a Merge branch 'fix/more-info-in-exceptions' into feature/enum_lookup_data 2020-07-03 14:22:11 -04:00
Aaron Louie f344fe60c0 WIP: Adds enum field lookup option data 2020-07-03 12:20:10 -04:00
Carlos Lopez 817333f26e Adding proper exception information 2020-07-02 16:10:33 -06:00
Dan Funk 84973d2351 resolving comments from pull request. 2020-06-30 12:24:48 -04:00
Dan Funk 93bf46354b A last minute change to make the API a little clearer and cleaner broke some tests. 2020-06-30 11:12:28 -04:00
Dan Funk f183e12fe5 Provides some basic tools for getting additional information about a lookup field.
Adds an optional 'value' parameter to the lookup endpoint so you can find a specific entry in the lookup table.
Makes sure the data attribute returned on a lookup model is a dictionary, and not a string.
Fixes a previous bug that would crop up if double spaces were used when performing a search.
2020-06-30 10:34:16 -04:00
Dan Funk d3ce1af1ce Provides some basic tools for getting additional information about a lookup field.
Adds an optional 'id' parameter to the lookup endpoint so you can find a specific entry in the lookup table.
Makes sure the data attribute returned on a lookup model is a dictionary, and not a string.
Fixes a previous bug that would crop up in double spaces were used when performing a search.
2020-06-30 10:00:22 -04:00
Aaron Louie e650a46073 Fixes local testing bug where working directory was sometimes wrong. 2020-06-29 16:41:42 -04:00
Dan Funk 49e80398be Merge branch 'rrt/dev' into dev 2020-06-29 14:56:01 -04:00
Aaron Louie a996c81508 Gets mi_index out of Spiff task internal data 2020-06-28 11:35:35 -04:00
Carlos Lopez d4bcb9af65 Proper error handling in csv/dumps for approvals 2020-06-27 13:59:04 -06:00
Aaron Louie 848ad563d3 Only filters by mi_index if task has a mult_instance_index 2020-06-26 12:47:42 -04:00
Aaron Louie f9f3003ef0 Filters by multi-instance index, if applicable 2020-06-26 12:31:37 -04:00
Dan Funk 150117587e Merge branch 'dev' into feature/parallel_multiinstance_tasks 2020-06-25 23:20:38 -04:00
Carlos Lopez 665faaa175 Send emails from service 2020-06-25 16:18:42 -06:00
Carlos Lopez 44995e3813 Merge branch 'feature/emails-enhancement' of github.com:sartography/cr-connect-workflow into feature/emails-enhancement 2020-06-25 14:37:04 -06:00
Aaron Louie c3ceda4c2f Replaces xml.etree with lxml.etree 2020-06-25 14:02:16 -04:00
Carlos Lopez 7116b582e8 Splitting commands properly without losing double quoted strings 2020-06-25 12:01:24 -06:00
Dan Funk fe5a7ddce3 Merge remote-tracking branch 'origin/rrt/dev' into feature/emails-enhancement 2020-06-25 13:29:06 -04:00
Carlos Lopez 5d1ae402b6 Slight refactor on data passed to template rendering 2020-06-24 22:43:44 -06:00
Carlos Lopez a0d877e02f Feedback from PR addressed 2020-06-24 22:23:31 -06:00
Carlos Lopez 5327b469f6 Merge branch 'rrt/dev' into feature/emails-enhancement 2020-06-24 21:46:53 -06:00
Carlos Lopez dd10e56d1a Adding forgotten variables to returned dict 2020-06-22 14:56:24 -06:00
Carlos Lopez dc5ffd29d0 Refactoring shared code 2020-06-22 14:07:57 -06:00
Carlos Lopez e5541e4950 Enable CSV download 2020-06-22 09:24:58 -06:00
Carlos Lopez b8d60ca944 Spreadsheet generation 2020-06-22 07:14:00 -06:00
Dan Funk 6aec15cc7c Shifting to a different model, where the TaskEvents store ONLY the form data submitted for that task.
In order to allow proper deletion of tasks, we no longer merge data returned from the front end, we set it directly as the task_data.
When returning data to the front end, we take any previous form submission and merge it into the current task data, allowing users to keep their previous submissions.
There is now an "extract_form_data" method that does it's best job to calculate what form data might have changed from the front end.
2020-06-19 08:22:53 -04:00
Carlos Lopez 4db815a999 Handling incoming values from processor 2020-06-17 21:11:47 -06:00
Carlos Lopez e947f40ec7 Merge branch 'rrt/dev' into feature/emails-enhancement 2020-06-17 20:10:11 -06:00
Carlos Lopez 896ba6b377 Email relies now on markdown content 2020-06-17 17:00:16 -06:00
Dan Funk da048d358e Merge branch 'dev' into feature/refactor_data_loading 2020-06-17 17:14:30 -04:00
Dan Funk 3b57adb84c Continuing a major refactor. Some important points:
* TaskEvents now contain the data for each event as it was when the task was completed.
* When loading a task for the front end, if the task was completed previously, we take that data, and overwrite it with the lastest data, allowing users to see previously entered values.
* Pulling in the Admin branch, as there are changes in that branch that are critical to seeing what is happening when we do this thing.
* Moved code for converting a workflow to an API ready data stricture into the Workflow service where it belongs, and out of the API.
* Hard resets just convert to using the latest spec, they don't try to keep the data from the last task.  There is a better way.
* Moving to a previous task does not attept to keep the data from the last completed task.
* Added a function that will fix all the existing RRT data by adding critical data into the TaskEvent model. This can be called with from the flask command line tool.
2020-06-17 17:11:15 -04:00
Aaron Louie 40ff3b5fcb Uses mock LDAP if LDAP_URL environment variable is 'mock' 2020-06-16 21:43:20 -04:00
Dan Funk 1b9166dcb7 Cleaning up the merge, which resulted in some lost code. 2020-06-16 13:34:21 -04:00
Dan Funk c7d8eaff30 Merge branch 'dev' into feature/refactor_data_loading 2020-06-16 13:15:43 -04:00
Dan Funk 92580ee867 adding an additional error check for invalid json returned from the Protocol builder. 2020-06-15 12:26:53 -04:00
Dan Funk eec4b579a7 Don't error out if we don't have a valid study id when doing validation. 2020-06-15 11:27:28 -04:00
Carlos Lopez 5f13b96079 More enhancements 2020-06-12 12:17:08 -06:00