Dan Funk
3cfcd74a6a
Just finding a few more edge cases, all tests should pass now.
2020-08-10 15:16:53 -04:00
Dan Funk
b53d033400
Cleaning up the delete workflow method in study service so we don't try to delete the same thing more than once)
2020-08-10 14:56:33 -04:00
Dan Funk
56b161a234
Fixing the failing tests by passing in workflow.id rather than workflow to the delete workflow endpoint
2020-08-10 13:51:05 -04:00
Carlos Lopez
d3462d2e15
Deleting all dependencies for a workflow
2020-08-10 07:42:56 -06:00
Carlos Lopez
a561a5cddc
Adjusting study events attribute
2020-08-08 18:25:01 -06:00
Aaron Louie
c25536dcca
Makes Sonar happy.
2020-08-04 16:42:35 -04:00
Aaron Louie
2846bf9451
Fleshes out fake PB response, so workflows that pull from PB actually trigger validation errors
2020-08-04 15:50:29 -04:00
Aaron Louie
b4595b345a
Raises ApiError for 'display_name' extension property exception
2020-08-04 13:59:50 -04:00
Carlos Lopez
50b207307a
Merge branch 'dev' into feature/update_study_status_latest
2020-07-31 14:26:24 -06:00
Carlos Lopez
5d23223e51
New study status update
2020-07-30 21:03:11 -06:00
Aaron Louie
73699e66bd
Merge branch 'dev' into feature/admin_impersonations
2020-07-30 17:36:20 -04:00
Dan Funk
9704cbcb26
Modifications to the ldap scripts to bring them back in line with what Kelly is doing with the evaluation process.
2020-07-30 13:35:20 -04:00
Aaron Louie
f8944da31f
Merge branch 'dev' into feature/admin_impersonations
2020-07-30 13:01:46 -04:00
Aaron Louie
faba0f55ab
Adds AdminSession model and refactors impersonation methods to use it.
2020-07-30 12:40:53 -04:00
Dan Funk
a6ec0c92c7
Merge remote-tracking branch 'origin/dev' into cr-connect-106-augment-eval-methods
2020-07-30 11:38:47 -04:00
Aaron Louie
aa0f24bd33
Fully deletes users from g in test tearDown
2020-07-30 10:40:06 -04:00
Dan Funk
31982f81ae
Merge branch 'dev' into feature/documents_publishing
...
# Conflicts:
# Pipfile.lock
2020-07-30 10:17:08 -04:00
Aaron Louie
1b0ebecbf4
Uses Flask session to store impersonation state.
2020-07-30 10:17:02 -04:00
Aaron Louie
d301e9e6fa
Adds list_users endpoint. Adds admin impersonate uid parameter to user endpoint. Adds some utility methods to user service. Refactors authentication tests.
2020-07-29 22:47:47 -04:00
Aaron Louie
f897ee3aea
Merge branch 'feature/approvals_dashboard_prototype' into feature/admin_impersonations
2020-07-29 10:32:46 -04:00
Dan Funk
0ea4c13d09
Convert protocol builder status to always be in lower case in order to better match the front end. And also fixing an issue with the multi_instance that is oddly broken suddenly, and I don't know why.
2020-07-28 17:16:48 -04:00
Dan Funk
4d11fc04a0
dropping the "read_only" flag in favor of a "do_engine_steps" flag, which more clearly defines what is happening.
2020-07-28 13:51:29 -04:00
Dan Funk
f15626033d
Allow the workflow to be requested without making changes to the workflow - requires that you specify a read_only flag of true, otherwise it assumes that you want a fully prepared workflow with the next ready task set to run.
2020-07-28 13:33:38 -04:00
Kelly McDonald
d617af8565
All tests are passing - may need to refactor a bit, / remove comments
2020-07-28 11:02:49 -04:00
Dan Funk
300026cbc8
Expanding the task events endpoint to accept workflow and study ids as additional filters.
...
Removing events from the study endpoint, too noisy.
2020-07-28 10:16:48 -04:00
Dan Funk
0cb480801b
Provide event data on the Study api endpoint.
...
Speed up the tests a little, because that got out of hand. Need to dig into what is causing this problem.
2020-07-27 17:05:01 -04:00
Dan Funk
452f2c3723
Building out a user service for getting the current user, it will provide a number of functions, one of which will allow administrative users to impersonate other users in some circumstances (but will assure that we log events correctly when an impersonation occures)
2020-07-27 14:38:57 -04:00
Kelly McDonald
70ad3872a7
Fix several bugs, most had an issue with the bpmn document
2020-07-27 12:02:34 -04:00
Kelly McDonald
a124e13c6a
Replace all legacy style calls with new calls.
...
Still having issues where we try to eval an empty definition, not quite sure why there is a difference from what we had before. I may need to revert some of it and determine what is going on.
2020-07-24 14:33:24 -04:00
Kelly McDonald
f5ab283538
Test of adding in the ability of augmenting the workflow to include internal scripts like StudyInfo
...
This is the first waypoint on a larger effort to make all of the 'special scripts' that currently require a shebang to be just another python function.
2020-07-24 12:08:46 -04:00
Dan Funk
5ec5fcb4e4
Correcting an issue with the Navigation where it did not correctly handle looking back to a previous task within the workflow.
...
In some cases the session was not getting committed, leaving rogue assignments outstanding for a workflow.
2020-07-23 12:00:24 -04:00
Aaron Louie
855f5544e5
Adds enrollment_date to study model
2020-07-22 09:35:08 -04:00
Dan Funk
6caf44544c
Merge branch 'dev' into cr-connect-92-scripting-enhancements
...
# Conflicts:
# crc/static/bpmn/ind_supplement/ind_supplement.bpmn
# tests/workflow/test_workflow_service.py
2020-07-20 13:01:23 -04:00
Dan Funk
dd0f984347
Drop backwards compatibility of scripts. While this will cause some initial pain, it's less confusing and error prone, and we are still in the development phase of the project. Were this going straight to production we would likely want to keep this backwards compatibility.
...
Don't parse on spaces if this is python code, so we avoid any errors in processing - spaces should be valid.
2020-07-20 12:26:34 -04:00
Dan Funk
b85869905b
Merge branch 'cr-connect-92-scripting-enhancements' of github.com:sartography/cr-connect-workflow into cr-connect-92-scripting-enhancements
2020-07-20 11:40:10 -04:00
Dan Funk
06430550c8
Dropping the RRT-Data-Fix, it should have come out already, but had a failing test, so pulling it out now rather than delve into what is going wrong with obsolete code.
2020-07-20 11:39:50 -04:00
Kelly McDonald
f415f22ccb
Add warning message when we fail due to syntax error and then we try to look up the class as a backup
2020-07-20 10:12:15 -04:00
Carlos Lopez
fcb772c900
Reporting to Sentry all captured exceptions and enabling multiple environments
2020-07-19 16:40:33 -06:00
Carlos Lopez
73400ed6c7
Adding proper tests for files publishing
2020-07-17 16:59:25 -06:00
Aaron Louie
e82532aad8
Updates IND workflow spec. Fixes validation process to return lookups for enum values.
2020-07-17 11:51:21 -04:00
Kelly McDonald
de54b63e20
Process scripts with no shebang (#!) as a regular python script. If there is a shebang, we look up the class as we did before.
...
I've also made it so that it falls back if we accidentally forget to add a shebang to a study as this would be a breaking change.
With the fallback feature, it should work with unmodified bpmn documents.
2020-07-17 10:56:04 -04:00
Kelly McDonald
ab5771024e
Check in for sanity check
2020-07-17 09:24:53 -04:00
Aaron Louie
d67105332f
Merge branch 'dev' into feature/lanes_and_roles
2020-07-16 14:00:53 -04:00
Aaron Louie
d0279a11e5
Fixes failing unit test
2020-07-15 17:44:46 -04:00
Aaron Louie
08fba1a4dc
Merge branch 'dev' into feature/dynamic_enum_list
2020-07-15 13:09:02 -04:00
Dan Funk
c7662315aa
Assure that any errors that occur during the do_engine_steps is correctly captured and returned to the end user or configurator with enough information for them to act on.
2020-07-15 11:16:35 -04:00
Dan Funk
fa7608053a
fixing a failed test.
2020-07-14 22:23:54 -04:00
Dan Funk
d85ca1ce51
Whenever a workflow is loaded or updated, add events to the TaskEvent table with assignments for the next set of ready tasks, along with who should complete those tasks.
...
Add the lane information to the Task model.
Drop the foreign key constraint on the user_uid in the task log, as we might create tasks for users before they ever log into the system.
Add a new endpoint to the API called task events. It should be possible to query this and get a list of all tasks that need a users attention.
The task events returned include detailed information about the workflow and study as sub-models
Rename all the actions in event log to things that are easier to pass over the api as arguments, make this backwards compatible, updating existing names in the database via the migration.
Throughly test the navigation and task details as control of the workflow is passed between two lanes.
2020-07-14 22:16:44 -04:00
Aaron Louie
d71ff80eac
Adds end and start events
2020-07-14 13:42:52 -04:00
Dan Funk
9077ff3ebf
It is not possible to use task_data for an auto-complete field. It's too expensive an operation to provide that feature on the backend, and the data already fully resides on the front end anyway. Task-data can be used to populate enum fields if needed, so it can populate dropdowns, radios and checkboxes, just not auto-complete.
2020-07-14 11:38:48 -04:00
