Commit Graph

1808 Commits

Author SHA1 Message Date
Dan Funk e10b210302
Merge pull request #323 from sartography/shield-test-issue-344
Shield test issue #344
2021-06-08 08:59:58 -04:00
Dan Funk a7b208f50a
Merge pull request #322 from sartography/data-store-refactor-330
Data store refactor #330
2021-06-08 08:58:53 -04:00
Dan Funk 6937c33719
Merge pull request #319 from sartography/datastore-file-endpoints-325
Datastore file endpoints #325
2021-06-08 08:54:43 -04:00
Dan Funk 37d4e7cc79
Merge pull request #318 from sartography/340-update_study_associate_change
Add test and fix to make sure that an empty study associates list (or…
2021-06-08 08:52:44 -04:00
Dan Funk c4a6fbb516
Merge pull request #317 from sartography/337-Data-Store-IRB-Code
337 partial fix
2021-06-08 08:51:09 -04:00
Dan Funk 5881c903ca
Merge pull request #316 from sartography/326-Multi_File_Data_Store
Make sure we are using the correct script engine
2021-06-08 08:49:43 -04:00
Dan Funk f9a0b0adee
Merge pull request #315 from sartography/get-dashboard-url-230
Fix for issue with get_dashboard_url #230
2021-06-08 08:48:37 -04:00
Dan Funk 710921cfe1
Merge pull request #314 from sartography/deprecate-study-info-protocol-261
Remove protocol from study_info script #261
2021-06-08 08:47:43 -04:00
Dan 59f605c3df Prefer tasks that share a parent over just the the next available task when returning the next_task in the workflow processor. 2021-06-08 08:03:14 -04:00
mike cullerton 9dc5871848 Added mocked PB data for tests using study_info script. 2021-06-07 10:08:44 -04:00
mike cullerton 70651e2a6a Test and BPMN files for testing 2021-06-04 11:45:51 -04:00
mike cullerton a3a485dd34 Changed do_task_validate_only so it returns a mocked value, instead of True/False.
True/False caused problems for workflow validations
2021-06-04 11:44:55 -04:00
mike cullerton 37ba46fb8f These tests now require PB Mock because of the validate_study_id changes 2021-06-03 14:30:00 -04:00
mike cullerton 9a63ab9c4f Change `do_task_validate_only` in study_info script to call the real do_task.
We do this so we can seed settings into the workflow for testing different scenarios using the study from validate_study_id
2021-06-03 14:28:24 -04:00
mike cullerton c41657301a Modify `test_spec` and `make_test_workflow` to accept new optional `validate_study_id` parameter.
Modify `make_test_workflow` to use study_id when creating test workflow for validation.
2021-06-03 14:22:26 -04:00
mike cullerton 0dfc96d7f6 Modified `validate_workflow_specification` to accept new optional `validate_study_id` parameter.
We then pass validate_study_id on to WorkflowService.test_spec
2021-06-03 14:19:41 -04:00
mike cullerton d657744816 Added optional `validate_study_id` parameter to the validation api endpoint. 2021-06-03 14:17:12 -04:00
mike cullerton a2e577829a Cleanup:
- removed unused imports
- removed testing print statement
2021-06-02 10:02:26 -04:00
mike cullerton 7f0d8a131d Import DataStoreBase from service now 2021-06-02 10:00:55 -04:00
mike cullerton 506b84a49a Import DataStoreBase from service now 2021-06-02 10:00:18 -04:00
mike cullerton e2e35b673d Moved data store code from script to service 2021-06-02 09:59:41 -04:00
mike cullerton 162dee45d3 Unused import 2021-06-01 16:34:21 -04:00
mike cullerton 200a5b3bf3 Updated tests for file datastore endpoint
Added test of 2 entries
2021-06-01 16:27:55 -04:00
mike cullerton ec8353aaa6 Test for new datastore file api endpoint 2021-06-01 13:51:40 -04:00
mike cullerton 2e3d8c7343 Fix for DataStoreSchema missing the file_id column.
The file_id column is a foreign key.
2021-06-01 13:51:10 -04:00
mike cullerton 1ed144536f New method for file datastore api endpoint 2021-06-01 13:50:04 -04:00
mike cullerton e9fe555e05 New `/datastore/file/{file_id}` endpoint definition 2021-06-01 13:49:21 -04:00
Kelly McDonald 8c04e228e9 Add test and fix to make sure that an empty study associates list (or a blank list) will effectively clear the extra study associates 2021-06-01 11:46:43 -04:00
Kelly McDonald a5d67bb245 337 partial fix
if the user calls the file_data_set function for a valid file with the key 'irb_code' and a value of a valid IRB document code, then we should set the irb code on the file.
2021-05-27 12:24:30 -04:00
Kelly McDonald acccf3b704 Make sure we are using the correct script engine 2021-05-26 10:50:20 -04:00
mike cullerton 1f67f55275 Fixed definition for FRONTEND and BPMN. I was overwriting the environmental variables. 2021-05-20 13:10:04 -04:00
mike cullerton 384da075ef Removed references to `protocol` from the description 2021-05-20 11:54:12 -04:00
Dan ef7ee284b2 Prefer tasks that share a parent over just the the next available task when returning the next_task in the workflow processor. 2021-05-19 16:26:16 -04:00
Dan 2caf548719 Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev 2021-05-18 09:53:24 -04:00
Dan e8810f36f2 Bumping Spiff version to correct issue with multi-instance script tasks. 2021-05-18 09:53:19 -04:00
Dan Funk 77f7fec5d4
Merge pull request #312 from sartography/study-is-none-329
Study is none #329
2021-05-14 16:33:04 -04:00
Mike Cullerton 668e2f4e3c
Merge pull request #313 from sartography/feature/add_file_data_store_properties_to_file
Assure that any data store values associated with a file come back as…
2021-05-14 16:30:35 -04:00
mike cullerton ce7c07679b SonarCloud 2021-05-14 15:52:30 -04:00
Dan 8e37f27399 Assure that any data store values associated with a file come back as a part of the get_study_data[documents
] endooint.
2021-05-14 15:52:25 -04:00
mike cullerton e75d933830 Make sure a standalone study does not cause an error in the /task_events api endpoint. 2021-05-14 15:35:17 -04:00
mike cullerton a9e3f7c861 Standalone workflows do not have a study_id, and we do not record task events for them. 2021-05-14 15:34:29 -04:00
Dan Funk 4d7ce5eda9
Merge pull request #311 from sartography/deprecate-study-info-protocol-261
Deprecate study info protocol #261
2021-05-14 14:14:18 -04:00
Dan 7e6645db89 Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev 2021-05-14 14:10:19 -04:00
Dan 427875b8dd upgrading Sartography libraries, and fixing a potential error where a file can't be located in the documents.xslt 2021-05-14 14:10:14 -04:00
mike cullerton 1a8c374ac0 Need to mock out these tests 2021-05-14 13:32:25 -04:00
mike cullerton a53e2db223 Final test for study_info script 2021-05-14 13:10:06 -04:00
Dan Funk ade7812540
Merge pull request #310 from sartography/get-primary-workflow-301
Get primary workflow #301
2021-05-14 12:41:48 -04:00
Dan Funk 6a34fc0cde
Merge pull request #309 from sartography/persist-read-only-data-324
Persist read only data #324
2021-05-14 12:38:48 -04:00
Dan Funk 1d28d602d5
Merge pull request #308 from sartography/get-dashboard-url-230
Get dashboard url #230
2021-05-14 12:36:40 -04:00
mike cullerton b0fcb09581 Fixed test to correspond to the changes in the mock data 2021-05-14 12:35:36 -04:00