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cr-connect-workflow
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1105 Commits

Author SHA1 Message Date
mike cullerton 41414e39c8 First pass at reorder spec code. 
Still need to return list of specs
Still need to work on spec categories
 2021-08-27 13:02:49 -04:00
mike cullerton f639e101b7 Commit the skeleton API endpoints, so we can use them while developing the BPMN side of things. 2021-08-27 11:40:38 -04:00
Mike Cullerton 961925e03e
Merge pull request #361 from sartography/430-email-enhancements 
#430 email enhancements
 2021-08-25 15:02:14 -04:00
Mike Cullerton fcbbeb4735
Merge pull request #360 from sartography/423-LibraryAppearingInDashboard 
Fixes #423
 2021-08-25 15:01:18 -04:00
Dan 4b9c5bd3e8 Fixing a stupid mistake. 2021-08-24 12:10:59 -04:00
Dan 0bd1c282a3 Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev 2021-08-20 13:46:08 -04:00
mike cullerton 32c72c5a40 Modified email script and email_service to accommodate new bcc, reply_to, and attachments arguments 
Modified the email script description to add the new arguments
Cleaned up some import statements
 2021-08-19 17:34:55 -04:00
mike cullerton ef9fd9514d This caused a key error if we had a repeating field that was unused 2021-08-19 17:32:24 -04:00
Kelly McDonald 76f8f5984e Fixes #413 
Fixes #423 where a library was showing up in a study workflow

Alex said this used to work, but I don't see where I ever edited the code that needed a filter.
 2021-08-19 10:47:13 -04:00
Mike Cullerton 5692f7d377
Merge pull request #359 from sartography/413-LibraryCleanup 
413 library cleanup
 2021-08-18 13:39:37 -04:00
Dan afaecfa21c Catching an error when variables conflict with repeating section variables. 2021-08-18 13:38:34 -04:00
Mike Cullerton feb72af32e
Update workflow.py 
Just completing a comment so I understood
 2021-08-18 13:27:28 -04:00
Kelly McDonald b4ecb0f97a Add backref cascade and make changes to the spot where we delete so it loads objects into memory and then uses the SQLAlchemy plumbing to make sure that the db object gets cleaned up. 2021-08-18 08:25:17 -04:00
Leashys 032aad9bc4 Fixes #383 - Timestamp on files is UTC? 
also this includes the shield test thing for the boolean_type property whoopsie
 2021-08-17 13:04:24 -04:00
Dan 7a8eeab820 Merge branch 'dev' into bug/missing_pi_name_246 2021-08-17 11:16:03 -04:00
Dan 6ce560cc2d Made a stupid mistake in a hot fix, causing the builds to fail. 2021-08-17 10:14:49 -04:00
Dan Funk c831ee7e4a
Merge pull request #357 from sartography/426-remove-hsr-number 
remove hsr number #426
 2021-08-17 09:58:56 -04:00
Dan 78f79a67b7 removing exectue flag. 2021-08-17 09:52:02 -04:00
Dan 4e0e162fd6 Removing the execution flag Nile keeps adding to files. 2021-08-17 09:50:57 -04:00
Dan 77de2a8f47 Merge branch 'dev' into bug/missing_pi_name_246 2021-08-17 09:47:09 -04:00
Dan 0a2597ae36 Just a quick hot fix so that when can still report errors back to the UI even when the task_data can't be serialized, which can happen when functions are defined. 2021-08-17 09:43:08 -04:00
nilez 07ffcd7c76 Dependencies In Testing are behind this avoids that issue. https://sonarcloud.io/project/issues?id=sartography_cr-connect-workflow&pullRequest=356&resolved=false&types=BUG 2021-08-16 23:46:39 -04:00
mike cullerton 3f44c202ca Merge branch '417-hsr-open-to-enrollment-bug' into 426-remove-hsr-number 2021-08-16 12:55:24 -04:00
mike cullerton b3fd72de8b Remove hsr_number from Study Schema 2021-08-16 12:51:48 -04:00
mike cullerton 1f82143aea Remove HSR Number from models 2021-08-16 12:50:09 -04:00
mike cullerton 46d7b13326 Start to remove HSR Number 2021-08-16 12:09:02 -04:00
nilez 0a232dace6 assertEquals -> assertEqual 2021-08-16 10:25:41 -04:00
nilez f8dd4c3eb9 Check Study Associates Endpoint 2021-08-16 09:32:02 -04:00
mike cullerton bd4a9cced3 We no longer use HSRNUMBER to automatically set Study Status to `Open for Enrollment` 2021-08-13 12:06:27 -04:00
nilez 4a2581e938 get studies raises and error when invalid studies are the only studies associated with the user 2021-08-12 14:03:44 -04:00
nilez 7027392a1b Merge remote-tracking branch 'origin/bug/missing_pi_name_246' into bug/missing_pi_name_246 
# Conflicts:
#	crc/services/workflow_service.py
#	tests/study/test_study_associate_script.py
 2021-08-12 13:01:41 -04:00
nilez e32c1db4c8 Merge remote-tracking branch 'origin/dev' into bug/missing_pi_name_246 
# Conflicts:
#	crc/models/study.py
#	crc/services/study_service.py
#	crc/services/workflow_service.py
#	tests/study/test_study_associate_script.py
 2021-08-12 12:59:15 -04:00
Dan 000de03733 Just a quick hot fix so that when can still report errors back to the UI even when the task_data can't be serialized, which can happen when functions are defined. 2021-08-12 12:49:19 -04:00
nilez 41e27cb454 Merge remote-tracking branch 'origin/dev' into bug/missing_pi_name_246 
# Conflicts:
#	crc/models/study.py
#	crc/services/study_service.py
#	crc/services/workflow_service.py
#	tests/study/test_study_associate_script.py
 2021-08-12 12:39:04 -04:00
nilez d20b68e483 Fixed Deprecation Warnings in Test Files 2021-08-12 12:33:27 -04:00
nilez 2732071585 Merge branch 'dev' into bug/missing_pi_name_246 2021-08-12 12:07:25 -04:00
Dan 40727c7ce6 avoid erroring out when unable to calculate a value expression as a part of finding a default value. 2021-08-12 11:35:05 -04:00
Dan Funk adb1b74822
Merge pull request #352 from sartography/post-process-empty-field-408 
Post process empty field #408
 2021-08-12 10:53:26 -04:00
mike cullerton d07bac27ca Fix for hidden file data field. 
We were processing a field that didn't have a value.
Ticket 408
 2021-08-11 16:43:50 -04:00
Dan 318cd34f81 bouncing to fix a bug in SpiffWorkflow that was holding outo outdated data deed within the python_script_engine. 
This caused validation to fail for valid repeat sections, so including a fix to allow that validation to continue.
 2021-08-11 14:21:23 -04:00
Dan 848c2e622f Always use a schema to define what is being returned, it enforces consistency of the API and internally we can depend on well defined objects. 2021-08-10 16:16:08 -04:00
Dan 913c12c02d Merge branch 'dev' into bug/pi_name_missing_246 2021-08-10 15:06:52 -04:00
Kelly McDonald 960d302c03 Finish #367 - Make sure that we only use a primary_id if it is in the workflow that we are currently working on - otherwise it is a library and might have its own primary id. 2021-08-10 09:15:38 -04:00
Kelly McDonald 6e1fedb704 Add tests for libraries, remove an API endpoint that didn't make sense after recent changes and remove some commented out sections that were not needed after some decisions about the api endpoints were made 2021-08-03 10:02:22 -04:00
Kelly McDonald 41ad7935f8 Merge branch 'dev' into 367-Call-Activity 
# Conflicts:
#	Pipfile.lock
 2021-07-29 09:28:21 -04:00
Kelly McDonald 217e61eed3 next_task returns the next available task, except when the task is completed when it returns the EndEvent - 
The problem was that it was returning the first EndEvent it found, not the last one. This caused a problem when we had a CallActivity which has its own EndEvent.

Fixes #399
 2021-07-27 09:19:08 -04:00
Kelly McDonald b857fddbad commit in intermediate changes to work on a bug 2021-07-26 13:00:11 -04:00
Dan Funk 25e00823a7
Merge pull request #342 from sartography/enum-file-data-375 
Enum file data #375
 2021-07-23 13:47:57 -04:00
mike cullerton 4c8a86f9bf Fixed bug where processing file data only worked for enums. 2021-07-23 11:24:17 -04:00
Dan 7f5c7417d8 Print out some additional debugging information in the email script so we can tell what is happening and where. 2021-07-22 16:02:08 -04:00