383 Commits

Author SHA1 Message Date
mike cullerton
2e9205fa08 Test and workflow for new script 2022-05-11 15:07:47 -04:00
mike cullerton
c28e9a5bdd Make sure we update workflow state when processing the master workflow 2022-05-06 14:09:23 -04:00
mike cullerton
9b65c46eeb Workflow for new test 2022-05-06 09:24:17 -04:00
mike cullerton
c42fdb8d6f Modify test to include name. Assert name is in the table 2022-04-25 15:42:17 -04:00
mike cullerton
08e9628350 Fix test for get_zipped_files script 2022-04-19 11:37:08 -04:00
Dan
5e54c90b47 "Reset" should not mean "re-start". Calling the reset_workflow script will now set the workflow to an "unstarted" state with no outstanding tasks, no json-state structure stored. The workflow is not yet running.
Also:
* Assured that arguments are consistent (we always seem to use workflow_spec_id, so I made sure we use that consistently.
* Don't require named parameters - so it's cool to call it like: reset_workflow('my_workflow_id')
* Task Actions (ie create, assign, etc...) are now an enumeration in the models, and not static variables on Workflow Service, so we can reference them consistently from anywhere.
* Removed some repetitive code
* Always try to validate as much as possible in the scripts to save folks time debugging.
*
2022-04-15 15:36:23 -04:00
mike cullerton
ae67c8985a forgot the workflow 2022-04-14 15:50:12 -04:00
mike cullerton
ea657cbbc2 Change value from string 'None' to value None to test deleting data_stores.
This as a work around, because the form field is set to string for other uses
2022-04-13 18:09:18 -04:00
mike cullerton
19da7ecd7e Fix test workflows to use new data_store scripts 2022-04-13 18:07:13 -04:00
mike cullerton
721907bf52 Modify test workflow to use new data_store_set script instead of separate study_data_set, user_data_set, and file_data_set scripts 2022-04-13 13:51:25 -04:00
Dan Funk
bf898993c4
Merge pull request #514 from sartography/get-irb-info-issue-702
Get irb info issue #702
2022-04-12 08:14:14 -04:00
mike cullerton
ed49ebcc23 Fix mock data to only return 1 record
Add mock record for error state when study is not yet uploaded
2022-04-07 14:39:39 -04:00
mike cullerton
da7c0a50ae Workflows for new tests 2022-04-05 18:17:54 -04:00
Dan Funk
095105e3e6
Merge pull request #508 from sartography/validation-with-data-store-396
Validation with data store #396
2022-04-04 16:51:57 -04:00
mike cullerton
51c6871d06 Update mock data to use new valid review type 2022-03-30 10:30:27 -04:00
Mike Cullerton
9ec1514267
Merge pull request #509 from sartography/chore/zip-file-update-688
Chore/zip file update #688
2022-03-29 09:41:32 -04:00
Mike Cullerton
6ff0cdbb9d
Merge pull request #507 from sartography/bug/validating_data_security
Bug/validating data security #684
2022-03-29 09:41:02 -04:00
mike cullerton
ee3217de62 Test for new feature 2022-03-28 11:59:53 -04:00
mike cullerton
6b93d605d4 Test for new validation_data_store.
We set 3 `real` data_store values in the DB
The workflow sets 3 validation_data_store values
We assert that the correct values are returned.
We also assert that we get correct default values back if we pass in bad keys
2022-03-25 10:06:03 -04:00
mike cullerton
51fa494d03 Assert we evaluate the hidden property correctly during validation. 2022-03-23 16:49:35 -04:00
mike cullerton
94abd7eebf *** WIP ***
Add a temporary data store for validation
2022-03-23 15:15:01 -04:00
Dan Funk
244fced84d
Merge pull request #506 from sartography/chore/unchecked-checkbox-default-671
Unchecked checkbox default #671
2022-03-23 10:59:47 -04:00
mike cullerton
1969e0b051 Make sure we don't get null/None back from a boolean checkbox.
This is not a comprehensive test, because we can't have an unchecked checkbox in validation.
We really need a frontend test for this.
2022-03-23 09:48:13 -04:00
alicia pritchett
487a1a3987 Fixes #667- Validate Lane Variables 2022-03-21 12:18:40 -04:00
Dan
a401c41b23 Setting a minimum date for which to import studies.
Merging in code to improve performance of calculating percent complete for a study.
Assureing we have a primary investigator for the front page (another merge)
2022-03-18 15:27:45 -04:00
Dan
ef5aca4fe4 ReviewType now comes back with the user studies, so we don't need to make an additional query to get it. 2022-03-18 09:59:10 -04:00
mike cullerton
199fe0626a Assert that if we get null for DATELASTMODIFIED, we use the value in DATECREATED 2022-03-17 15:56:44 -04:00
Dan
52b5e1d34a Fixing tests. 2022-03-11 18:02:37 -05:00
Dan Funk
2d5517bd15
Merge pull request #487 from sartography/chore/update-get-workflow-status-664
Chore/update get workflow status #664
2022-03-10 14:30:32 -05:00
mike cullerton
291de1c322 Add UserTask to pass in log data--level, code, and message 2022-03-09 14:55:52 -05:00
mike cullerton
e1d1a7613d Fix test to use workflow_spec_id 2022-03-09 11:15:20 -05:00
Dan
26eeb2912a Only run the form validation stuff if we have a form.
If there is a default value, use it, regardless of whether the form is hidden (this is how the front end works)
  (accomplished by moving the hide_epxression check -> continue stuff below the set default_value code)
2022-03-08 18:13:54 -05:00
Dan
b03e24bbf4 Properly handle forms where a field is required, based on a later field.
Do an aboutface on saying that if a field is required but hidden, it has to have a default value.  I'm just commenting this out for now, as it made getting these workflows to validate bloody impossible.
Clean up the replication of code for identifying required fields (as it wasn't consistently applied)
Removing some very broken and apparently unused methods.
2022-03-08 17:36:13 -05:00
Dan Funk
3f82cdae48
Merge pull request #485 from sartography/bug/validating-associates-659
Bug/validating associates #659
2022-03-07 14:20:20 -05:00
mike cullerton
ebaf857a14 Tests for using study in get_study_associates 2022-03-04 16:28:42 -05:00
mike cullerton
0ad12f9c85 Test for set_study_status script 2022-03-03 11:11:54 -05:00
mike cullerton
9c0b5b9e16 Test for new feature 2022-03-01 16:17:34 -05:00
mike cullerton
2c427cc34c Temporary fix for variable issue in SpiffWorkflow.
There is a fix coming in SpiffWorkflow
2022-02-25 15:56:13 -05:00
mike cullerton
f2c97f80d5 Merge branch 'dev' into feature/delete-variable-script-584
# Conflicts:
#	Pipfile.lock
2022-02-25 15:54:34 -05:00
Dan Funk
18802d6732
Merge pull request #468 from sartography/chore/performance
Performance Improvements:
2022-02-25 12:10:47 -05:00
Dan Funk
b6af80f6de
Merge pull request #469 from sartography/feature/modify-spreadsheet-624
modify spreadsheet #624
2022-02-25 10:29:37 -05:00
Dan Funk
5ff84d74f1
Merge pull request #464 from sartography/feature/start-workflow-602
Feature/start workflow #602
2022-02-25 10:28:26 -05:00
mike cullerton
9d2436b375 Typo calling script with keywords 2022-02-25 08:18:07 -05:00
Dan
3442655bd1 Performance Improvements:
1. Avoid ever re-generating the list of scripts that can be used in a script task.  Terribly expensive as we call eval constantly, and it never ever changes once the app starts. (see script.py changes, and comments)
2. Cache the DocumentStatus list in the flask session, so we calculate it at most once per API Call.  It's at least .25 seconds per call.  (see study_sevice)
3. We called UserFileService.get_files_for_study (which runs a db query EVERY time) for every possible document type.  Now we run the query once (study service line 321)
4. When returning a workflow, we looped through every single task in that workflow's navigation, and called the expensive spiff_task_to_api_task just to figure out it's proper display name. We run a much faster and more efficient method to calculate the display name naow (see workflow_service on lie 680, and 799)
5. A hellton of @timeit and sincetime() calls, that I want to leave in, to help debug any slowness on production.
2022-02-24 14:25:42 -05:00
mike cullerton
e1bd301e41 Merge branch 'dev' into feature/start-workflow-602 2022-02-24 10:36:38 -05:00
mike cullerton
0b3187889d We now raise an error if the spreadsheet does not exist.
Added test for case where the spreadsheet does not exist
2022-02-24 10:25:34 -05:00
mike cullerton
1fe1ce2e22 Merge branch 'dev' into feature/modify-spreadsheet-624 2022-02-24 09:42:53 -05:00
Dan Funk
e8617038ab
Merge pull request #461 from sartography/bug/missing-executabe-option-601
Bug/missing executabe option #601
2022-02-24 08:46:46 -05:00
mike cullerton
d378078d6f Change so that we always use the current workflow 2022-02-23 15:18:03 -05:00
mike cullerton
679a875666 Test for new script 2022-02-23 14:30:45 -05:00