5d23223e51
New study status update
2020-07-30 21:03:11 -06:00
de49397549
Adjustings tests for protocol builder status changes
2020-07-29 10:51:34 -06:00
73a6b7adf1
Fixing tests
2020-07-29 10:25:57 -06:00
6aa21638de
Updating properly study status & fixing tests
2020-07-29 10:25:57 -06:00
0ea4c13d09
Convert protocol builder status to always be in lower case in order to better match the front end. And also fixing an issue with the multi_instance that is oddly broken suddenly, and I don't know why.
2020-07-28 17:16:48 -04:00
79adb673f2
Fixes display_name custom properties
2020-07-28 14:04:18 -04:00
4d11fc04a0
dropping the "read_only" flag in favor of a "do_engine_steps" flag, which more clearly defines what is happening.
2020-07-28 13:51:29 -04:00
f15626033d
Allow the workflow to be requested without making changes to the workflow - requires that you specify a read_only flag of true, otherwise it assumes that you want a fully prepared workflow with the next ready task set to run.
2020-07-28 13:33:38 -04:00
300026cbc8
Expanding the task events endpoint to accept workflow and study ids as additional filters.
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Removing events from the study endpoint, too noisy.
2020-07-28 10:16:48 -04:00
0cb480801b
Provide event data on the Study api endpoint.
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Speed up the tests a little, because that got out of hand. Need to dig into what is causing this problem.
2020-07-27 17:05:01 -04:00
8d42d520a0
Adding events to the study that is returned via the api.
2020-07-27 16:32:23 -04:00
de0fe705c3
Wrapping LOCKED task update attempt into a try-catch block for tests
2020-07-27 14:00:44 -06:00
0d2cb8c1b8
Correcting an issue with the Navigation where it did not correctly handle looking back to a previous task within the workflow.
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In some cases the session was not getting committed, leaving rogue assignments outstanding for a workflow.
2020-07-27 12:36:20 -06:00
6379b26a71
Add a few more details to the workflow metadata model.
2020-07-27 12:34:25 -06:00
824582dab1
Hot fix to correct for a failing test due to updates in Spiffworkflow library,
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and modifying the token authorization so that we can log in as different users when not in production mode.
2020-07-27 11:25:29 -04:00
aa7437bfc4
Merge branch 'dev' into feature/approvals_dashboard_prototype
2020-07-22 13:08:32 -04:00
a243c14d75
Updating to lastest spiffworkflow which uses box to support dot notation.
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Adding a new endpoint for evaluating the results of a python expression into the tools section of the api.
2020-07-22 11:30:16 -04:00
3d9eeab502
Add a few more details to the workflow metadata model.
2020-07-21 15:18:08 -04:00
d01b30debc
Building the start of an endpoint that could be used by logged in / authenticated users that will evaluate basic python functions sent in via the API.
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The hope here is that we can process these in real time for the front end, but still do it using the same evaluation engine we use everywhere else, so
the syntax for things like hide-expressions can be properly verified during workflow validation and will be assured to work during front end rendering.
Removing any all javascript code in the BPMN models.
2020-07-21 13:57:33 -04:00
6caf44544c
Merge branch 'dev' into cr-connect-92-scripting-enhancements
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# Conflicts:
# crc/static/bpmn/ind_supplement/ind_supplement.bpmn
# tests/workflow/test_workflow_service.py
2020-07-20 13:01:23 -04:00
dd0f984347
Drop backwards compatibility of scripts. While this will cause some initial pain, it's less confusing and error prone, and we are still in the development phase of the project. Were this going straight to production we would likely want to keep this backwards compatibility.
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Don't parse on spaces if this is python code, so we avoid any errors in processing - spaces should be valid.
2020-07-20 12:26:34 -04:00
06430550c8
Dropping the RRT-Data-Fix, it should have come out already, but had a failing test, so pulling it out now rather than delve into what is going wrong with obsolete code.
2020-07-20 11:39:50 -04:00
fcb772c900
Reporting to Sentry all captured exceptions and enabling multiple environments
2020-07-19 16:40:33 -06:00
e82532aad8
Updates IND workflow spec. Fixes validation process to return lookups for enum values.
2020-07-17 11:51:21 -04:00
de54b63e20
Process scripts with no shebang (#!) as a regular python script. If there is a shebang, we look up the class as we did before.
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I've also made it so that it falls back if we accidentally forget to add a shebang to a study as this would be a breaking change.
With the fallback feature, it should work with unmodified bpmn documents.
2020-07-17 10:56:04 -04:00
ab5771024e
Check in for sanity check
2020-07-17 09:24:53 -04:00
7cbafe966e
Adds form key and pool name
2020-07-16 17:59:56 -04:00
9570e19b09
Fixes failing test
2020-07-16 14:02:29 -04:00
d67105332f
Merge branch 'dev' into feature/lanes_and_roles
2020-07-16 14:00:53 -04:00
d0279a11e5
Fixes failing unit test
2020-07-15 17:44:46 -04:00
040a95281e
Updates package hashes
2020-07-15 17:09:34 -04:00
08fba1a4dc
Merge branch 'dev' into feature/dynamic_enum_list
2020-07-15 13:09:02 -04:00
c7662315aa
Assure that any errors that occur during the do_engine_steps is correctly captured and returned to the end user or configurator with enough information for them to act on.
2020-07-15 11:16:35 -04:00
d85ca1ce51
Whenever a workflow is loaded or updated, add events to the TaskEvent table with assignments for the next set of ready tasks, along with who should complete those tasks.
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Add the lane information to the Task model.
Drop the foreign key constraint on the user_uid in the task log, as we might create tasks for users before they ever log into the system.
Add a new endpoint to the API called task events. It should be possible to query this and get a list of all tasks that need a users attention.
The task events returned include detailed information about the workflow and study as sub-models
Rename all the actions in event log to things that are easier to pass over the api as arguments, make this backwards compatible, updating existing names in the database via the migration.
Throughly test the navigation and task details as control of the workflow is passed between two lanes.
2020-07-14 22:16:44 -04:00
9077ff3ebf
It is not possible to use task_data for an auto-complete field. It's too expensive an operation to provide that feature on the backend, and the data already fully resides on the front end anyway. Task-data can be used to populate enum fields if needed, so it can populate dropdowns, radios and checkboxes, just not auto-complete.
2020-07-14 11:38:48 -04:00
a48322ef6a
Partial work on CR Connect Roles.
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Adding checks in the API to assure the correct person is completeing a task based on the task's lane.
Adding lane to the Navigation item.
Adding a check to assure that unique user ids can be identified using task.data
Added some additional ldap entries to make testing and development easier.
Removed a big chunk of duplicate code from task_tests_api
Modified some of the helper functions to make it easier to test as specific users.
Added some additional bpmn models to the tests for testing lanes and roles.
2020-07-14 10:29:25 -04:00
f83995a692
Partial work towards roles and lane support
2020-07-14 09:01:29 -04:00
07066b8a16
Looks up enum options from task data
2020-07-13 17:46:28 -04:00
3c8e1e5c37
Tests for presence of data property in enum options
2020-07-13 11:02:29 -04:00
ff7c30b879
Merge pull request #138 from sartography/fix/cleanup_todos
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Cleanup pending TODOs
2020-07-10 08:26:47 -04:00
6a79fb3581
There may be multiple investigators of the same type that come back from the protocol builder, adding some tests and additional code to handle this, but still keep the list flat, currently appends a number to the investigator type when there is more than one.
2020-07-07 17:16:33 -04:00
b4e127b3b7
Cleaning properly previous versions
2020-07-07 08:32:41 -06:00
a302208890
Updating test for study with approvals
2020-07-07 08:32:41 -06:00
c7b864f9c7
Cleaning up old notes
2020-07-07 08:32:20 -06:00
8a66128189
Bug fixes after bumping the version of Spiffworlflow to the latest - which has fixes for sequential multi-instance.
2020-07-06 15:34:24 -04:00
419c05e46c
Merge branch 'dev' into fix/more-info-in-exceptions
2020-07-06 12:51:24 -04:00
a5cef8775e
* Modifying the StudyInfo script to return both "investigators" and "roles", the investigators argument will return only the current active investigators according to the protocol builder. The "roles" argument returns all possible roles - it is what "investigators" use to be.
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* The Task.title returned to the front end will now attempt to process the "display_name" property for dot-notation syntax, making it possible to use this for multi-instance tasks,
but will work in all cases where we want he title to change based on values in the data model.
* Fixing a bug the test_study_api where it wasn't updated when we made recent changes to the different states of a study.
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2020-07-06 12:09:21 -04:00
817333f26e
Adding proper exception information
2020-07-02 16:10:33 -06:00
93bf46354b
A last minute change to make the API a little clearer and cleaner broke some tests.
2020-06-30 11:12:28 -04:00
f183e12fe5
Provides some basic tools for getting additional information about a lookup field.
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Adds an optional 'value' parameter to the lookup endpoint so you can find a specific entry in the lookup table.
Makes sure the data attribute returned on a lookup model is a dictionary, and not a string.
Fixes a previous bug that would crop up if double spaces were used when performing a search.
2020-06-30 10:34:16 -04:00
Carlos Lopez
Dan Funk
Aaron Louie
Kelly McDonald