Commit Graph

21 Commits

Author SHA1 Message Date
Dan Funk 7b085c9c9d Adding an API Endpoint that will return a list of LookupValues that match a given query - can be used to populate an auto-complete table. 2020-04-22 19:40:40 -04:00
Dan Funk 6de8c8b977 Create lookup tables for XSL files referenced in workflows so we can do full text searches and populate lists on the fly quickly. 2020-04-22 15:37:02 -04:00
Dan Funk 241980f98f If you name add a file to a workflow that has the exact same name as a Task Spec's ID, and an extension of "md", it wll use that file as the markdown content, and ignore the markdown in the documentation on the task spec.
Moving the primary process id from the workflow model to the file model, and assuring it is updated properly.  This was causing a bug that would "lose" the workflow.
2020-04-17 13:30:32 -04:00
Dan Funk b35427523d Merge remote-tracking branch 'origin/master' into feature/reference_files
# Conflicts:
#	crc/models/file.py
#	crc/services/file_service.py
#	tests/data/reference/irb_documents.xlsx
#	tests/test_files_api.py
2020-03-20 11:07:55 -04:00
Dan Funk 3eb1167b8e Found a few errors in the sqlalchemy file definition that was causing failures, and had some consistency problems with the IRB Categories file name. The API was bailing out because we had restricted file types to bpmn,svg,or dmn in the connexion config file, I don't restrict this anymore we have plenty of checks elsewhere. Adding xlrd as a dependency - this didn't fail till a push to production. 2020-03-20 08:21:21 -04:00
Dan Funk 6e3b6c2635 Assure that files uploaded through web forms and files generated from templates can be cross-referenced to known document requirements from the protocol builder. Configurators can control this by managing an XLS Spreadsheet called "irb_documents.xslx".
Required Documents is becoming complicated, so making this it's own script task, removing it from study_info.py
The file_service is now very aware of this irb_documents file, so it will always need to exist.  We seed this file
during setup, but it can be overwritten by the configurator.
2020-03-19 17:14:20 -04:00
Dan Funk 02be8ede75 Merge remote-tracking branch 'origin/master' into feature/reference_files 2020-03-18 15:16:34 -04:00
Aaron Louie 40e12f5ab5 Resolves marshmallow_sqlalchemy.ModelSchema deprecation warning 2020-03-16 13:37:31 -04:00
Dan Funk 779674ab60 Add the ability to upload and request general reference files by name. These will be used across workflows and will frequently contain lookup tables that can be referenced by various script tasks. 2020-03-13 15:03:57 -04:00
Aaron Louie 902dba7191 Adds is_status flag to workflow specs 2020-03-13 14:56:46 -04:00
Dan Funk c5cee4761e Improve version handling of files. Consolidate more of this logic in FileService. Place the version on the actual data model, not the file model, so the file model remains the same, and we just version the data associated with it. 2020-03-04 13:40:25 -05:00
Aaron Louie 16db1e3504 Adds default_value to Task schema 2020-02-18 10:14:03 -05:00
Aaron Louie 71dac70e1f Updates list of allowed files. Removes unnecessary migrations. Note this will require a full wipe & reset of the database to work. 2020-02-05 17:23:37 -05:00
Aaron Louie 654f39e7fd Adds form field key to file model. 2020-02-05 14:55:31 -05:00
Aaron Louie 3ee0426ba9 Adds workflow_id to file endpoints. 2020-02-04 14:26:53 -05:00
Aaron Louie 098ecb3e87 Wipes out old migrations, since changing foreign key constraints in SQLite requires a full database reset anyways. 2020-02-04 09:57:02 -05:00
Aaron Louie 0368657549 Adds ability to get FileModel records by study and task 2020-02-03 21:56:18 -05:00
Dan Funk 8fbbed4feb You must all "do engine steps" when completing a task so that it will kick off any automatic tasks/decisions/etc... this will update remaining tasks. Added some tests for parallel, since I wrote them trying to debug this. 2020-02-03 15:15:36 -05:00
Aaron Louie 53d72bdaae Includes workflow spec id 2020-01-13 17:52:37 -05:00
Aaron Louie e75da611ca Adds endpoints for creating and updating a Study. 2020-01-03 11:44:24 -05:00
Dan Funk c4cbaeb64e Refactor models into seperate directories 2019-12-31 16:32:47 -05:00