Commit Graph

174 Commits

Author SHA1 Message Date
Dan Funk 48bf721b23
Merge pull request #331 from sartography/bug/356_duplicate_workflow
Bug/356 duplicate workflow
2021-06-22 17:42:24 -04:00
Dan 07eb3f9ca8 Moving metrics into SpiffWorkflow so we can run the performance metrics deeply across both systems simultaniously.
Upgrading libraries.
Fixing deprication issue with Pandas and numpy.
We can only process xlsx files now, plain oldschool xls is fully removed.
2021-06-18 16:41:55 -04:00
mike cullerton 02949dc6e2 WorkflowProcessor handles this error 2021-06-15 11:12:50 -04:00
mike cullerton c8f8888c17 Script to reset workflow. Requires workflow spec name. 2021-06-14 14:51:16 -04:00
Dan Funk 9c4994581d
Merge pull request #324 from sartography/modify-infinite-loop-312
Modify infinite loop #312
2021-06-08 10:30:13 -04:00
Dan Funk e10b210302
Merge pull request #323 from sartography/shield-test-issue-344
Shield test issue #344
2021-06-08 08:59:58 -04:00
Dan Funk a7b208f50a
Merge pull request #322 from sartography/data-store-refactor-330
Data store refactor #330
2021-06-08 08:58:53 -04:00
Dan Funk 37d4e7cc79
Merge pull request #318 from sartography/340-update_study_associate_change
Add test and fix to make sure that an empty study associates list (or…
2021-06-08 08:52:44 -04:00
Dan Funk c4a6fbb516
Merge pull request #317 from sartography/337-Data-Store-IRB-Code
337 partial fix
2021-06-08 08:51:09 -04:00
Dan Funk 710921cfe1
Merge pull request #314 from sartography/deprecate-study-info-protocol-261
Remove protocol from study_info script #261
2021-06-08 08:47:43 -04:00
mike cullerton a3a485dd34 Changed do_task_validate_only so it returns a mocked value, instead of True/False.
True/False caused problems for workflow validations
2021-06-04 11:44:55 -04:00
mike cullerton 9a63ab9c4f Change `do_task_validate_only` in study_info script to call the real do_task.
We do this so we can seed settings into the workflow for testing different scenarios using the study from validate_study_id
2021-06-03 14:28:24 -04:00
mike cullerton 7f0d8a131d Import DataStoreBase from service now 2021-06-02 10:00:55 -04:00
mike cullerton e2e35b673d Moved data store code from script to service 2021-06-02 09:59:41 -04:00
Kelly McDonald 8c04e228e9 Add test and fix to make sure that an empty study associates list (or a blank list) will effectively clear the extra study associates 2021-06-01 11:46:43 -04:00
Kelly McDonald a5d67bb245 337 partial fix
if the user calls the file_data_set function for a valid file with the key 'irb_code' and a value of a valid IRB document code, then we should set the irb code on the file.
2021-05-27 12:24:30 -04:00
mike cullerton 384da075ef Removed references to `protocol` from the description 2021-05-20 11:54:12 -04:00
Dan Funk 4d7ce5eda9
Merge pull request #311 from sartography/deprecate-study-info-protocol-261
Deprecate study info protocol #261
2021-05-14 14:14:18 -04:00
mike cullerton d189b84ba1 Removed `protocol` as an option in the study_info script 2021-05-13 16:22:42 -04:00
mike cullerton 5efb1a72ce Changed URL to use HTTPS instead of HTTP 2021-05-06 15:52:27 -04:00
mike cullerton 09a395fa34 Start for ticket 230 - Get Dashboard URL 2021-05-06 14:07:21 -04:00
Dan 620b9a5188 Fixing a regression. It's critical that Spiffworkflow's box implement deepcopy, as this is used by Jinga prior to generating a word document. 2021-05-05 21:36:57 -04:00
Dan Funk 8b0afa4437
Merge pull request #304 from sartography/irb-info-script-307
Irb info script #307
2021-05-04 11:40:52 -04:00
Dan Funk 4780240103
Merge pull request #302 from sartography/320-add-default-for-file-data-get
Add default capability to file_data_get script
2021-05-04 11:28:40 -04:00
Dan Funk d6054a9846
Merge branch 'dev' into 310-task-event-timezone 2021-05-04 11:21:36 -04:00
mike cullerton 7689281d68 Fixed typo. Response should be list, not dict. 2021-05-03 14:52:29 -04:00
mike cullerton 060ee5076d New script to get IRB Info for a study 2021-05-01 15:52:41 -04:00
Kelly McDonald 7608a889fb Add default capability to file_data_get
script
2021-04-30 10:11:50 -04:00
Kelly McDonald 2b9cee6b89 Update database to include timezone and change all points where we set the time on an event to be utc time. If we get something in the database with a timezone, it will display properly on the front end, but by default everything will be put in the database in UTC 2021-04-29 10:25:28 -04:00
Kelly McDonald dc6f1cc80d Emulate checks on keyword arguments and then return. Validate only should have no side effects so the previous behavior was a bug. 2021-04-28 10:03:52 -04:00
Kelly McDonald 40ee20ecca Add file_data_get and file_data_set functions that can be accessed in a bpmn script function
Fixes #299
2021-04-26 09:55:28 -04:00
Kelly McDonald d3d7eeb309 Add file_data_get and file_data_set functions that can be accessed in a bpmn script function
Fixes #299
2021-04-26 09:41:14 -04:00
Dan 41310b6879 Allow both a keyword argument, a single argument when calling delete_file. And call it "delete_file" to be more conssitent with existing scripts. 2021-04-08 13:42:17 -04:00
Dan Funk 611c72f431
Merge pull request #284 from sartography/delete-uploaded-file-script-283
Delete uploaded file script #283
2021-04-08 12:42:30 -04:00
mike cullerton f8428378e2 You can now delete a document or list of documents.
Also, refactored the fancy bits into `process_document_deletion`
2021-04-05 15:11:06 -04:00
mike cullerton f0f5cff8d7 Added some checks to do_task to look for valid irb_doc_code and whether or not we found a file
Added code for do_task_validate
2021-04-05 13:15:09 -04:00
Dan 4fd8fd13f8 Remove approvals from the study_info script. It was broken, and isn't really possible in this way anymore 2021-04-05 12:52:23 -04:00
Dan 501487b31c Assure we convert to box for validations as well, and test the bloodly snot out of this. 2021-04-05 12:47:50 -04:00
Dan 727aa72e18 Fix a bug from recent performance improvments - be sure that our study info script returns dicts that can be referenced immediately with dot notation, as this is a common pattern in our bpmn script tasks. 2021-04-05 11:31:06 -04:00
mike cullerton 9317e49e65 Merge branch 'dev' into delete-uploaded-file-script-283 2021-04-05 10:40:33 -04:00
mike cullerton 0eb6291740 Script to delete an IRB document. Takes an `irb_document` argument.
Deletes all files associated with the workflow with that IRB document code
2021-04-05 08:55:02 -04:00
Kelly McDonald 116bf5e7aa Merge branch 'dev' into 263-optimize-dashboard
# Conflicts:
#	crc/services/study_service.py
2021-03-31 10:20:33 -04:00
Kelly McDonald 60f5be1aef Check in - pending change from @cullerton 2021-03-30 12:10:49 -04:00
Dan Funk 123ec50912
Merge pull request #272 from sartography/infinite-validations-262
Infinite validations 262
2021-03-26 19:49:42 -04:00
Dan Funk 6ab98c1dee
Merge pull request #267 from sartography/get-study-associates-validation-242
The `do_task_validate_only` method in the `get_study_associates` scri…
2021-03-19 15:41:46 -04:00
mike cullerton e2ba19748d Added department chair to the mocked data for study_info script.
The missing department chair caused an infinite loop in a workflow that checked for a department chair.
2021-03-16 13:36:55 -04:00
mike cullerton 70efdb4788 The `do_task_validate_only` method in the `get_study_associates` script now returns a mocked list of associates.
It used to return `True`, and this caused shield validation to fail when looping over the results of `get_study_associates`.
(You can't loop over a boolean)

Added a for loop in `study_sponsors_associate.bpmn` to test for this.
Moved `BaseTest` import to the top of `test_study_associate_script` because debug was failing.
2021-03-16 08:57:30 -04:00
mike cullerton dfa65ac276 We now perform an LDAP lookup for the associated user email addresses, instead of looking in the DB user table. 2021-03-15 10:30:23 -04:00
mike cullerton 67697b5076 Lots of changes!
Email Script:
- The email script now accepts 3 keyword arguments; subject, recipients, and cc.
- Subject and recipients are required.
- Recipients (and cc) can be an email address or list of addresses.
- You can use the string 'associated' in place of an email address, in which case we look up the users associated with a study that have send_email set to True.
- Moved some helper methods to email_service.

Email Service:
- Added cc argument
- Added helper methods previously in email script.
- Modified get_rendered_content to accept message and data directly. Previously, we passed in the task and grabbed them from there. Now we can use the method outside a task.
2021-03-11 11:32:21 -05:00
mike cullerton 7171219e8b removed unused import 2021-03-09 07:00:20 -05:00