Dan
80ff8a6212
Allows us to delete a study even if there are emails, and associated study users connected to that study.
2021-03-09 13:31:26 -05:00
Dan
576aebab19
Sometimes a workflow can be completely broken and unloadable. For instance, it starts off with a engine step / script task that will not execute. So the failure happens the second it is processed. When calling reset on a workflow, we should catch the failure, and reset the workflow, so we aren't trapped in an unrecoverable state.
...
To do so, I changed the WorkflowProcessor's reset method to be static, it will try to instantiate the current workflow and execute a cancel_notify event, but if that fails, it will continue and always return a new workflow processor using the latest spec.
2021-03-09 11:52:55 -05:00
mike cullerton
7171219e8b
removed unused import
2021-03-09 07:00:20 -05:00
mike cullerton
44ac55bc32
We can now send emails to users associated with a study, by using 'associated' as the recipient
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We now use keyword arguments in the email script; subject and recipients
2021-03-09 06:49:39 -05:00
Dan
36dcc58705
Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev
2021-03-08 14:00:14 -05:00
Dan
291216e081
Fixing a bug that prevented proper evaluation of a enum field where the default value was null or empty.
2021-03-08 14:00:03 -05:00
mike cullerton
f883eb2bbe
We now include field.id in the ApiError message for hidden and default validation. (The field must have a default value or value expression)
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While working on this ticket I found a logic error in the test. I expected both default_value and value_expression. It turns out the default_value is always there, it's just null if we don't set it.
Modified the existing test for hidden and required, and added tests to make sure my passing logic is now correct.
2021-03-04 10:42:13 -05:00
Dan
9e758c57d3
Merge branch 'dev' into bug/225_enum_lookup_same_field_name
2021-03-02 14:15:58 -05:00
Dan Funk
572eb3457a
Merge pull request #252 from sartography/customer-error-messages-192
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Customer error messages 192
2021-03-02 13:45:38 -05:00
Dan
adb9e3afba
Merge branch 'dev' into bug/225_enum_lookup_same_field_name
2021-03-02 13:40:21 -05:00
Dan
c8f5a44050
adding a warning in the logger so we can see when expensive calls are made to rebuild searches for enumerations. But all looks good.
2021-03-02 12:21:51 -05:00
Kelly McDonald
06dedd8a32
Add short_title to study, change update_study task to use kw arguments and add the short_title to the update_study script
2021-03-02 10:03:53 -05:00
mike cullerton
9a2ffb98ad
Customer Error is in a place that we can try it out on testing.
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So far, there are two known errors.
- Missing condition type (Ticket 178)
- Invalid property value in extensions tab for display_name (No ticket for this error)
We now have the option of using regular expressions to pull task_id, etc. from an error to pass back to the user in the hint.
2021-03-01 16:41:55 -05:00
Dan Funk
3e0541fa15
Merge pull request #250 from sartography/206-extend-study-access
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206 extend study access
2021-03-01 14:55:38 -05:00
Dan
aac3d5c16e
Bug #255 , this requires the front end to pass in the name of the task, when doing a lookup. This will prevent a bug where we have multiple user tasks, with enum fields that set the same variable, but use different lookup tables to populate the dropbown or search feature.
2021-03-01 14:54:04 -05:00
mike cullerton
9d804c36d5
Merge branch 'dev' into customer-error-messages-192.
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Needed some sql changes from dev
2021-03-01 10:29:10 -05:00
Kelly McDonald
0b08a95e25
Add test and make sure that the API endpoint does the right thing when we switch users - checks both associated with access and associated with no access
2021-02-25 12:20:43 -05:00
mike cullerton
5c3d791bf3
UVA asked us to remove the extra whitespace in emails.
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We removed the string replacement of '\n' -> '<br>' to solve this.
This means you can't purposely add blank lines any more.
Trade offs.
2021-02-25 11:08:08 -05:00
Kelly McDonald
f3414e22c1
use the associated table to grant access to users who have been designated to have access to the study, not just the study owner.
2021-02-25 11:08:06 -05:00
Kelly McDonald
f592a8a0b0
Added a few more tests - I think I need to test one more script endpoint
2021-02-25 09:07:46 -05:00
Kelly McDonald
9bd3aa8dcb
service and scripts with working test - still needs a few more tests to try out, but should work to get Mike going
2021-02-24 12:55:23 -05:00
Kelly McDonald
c795dd7aea
Merge branch 'dev' into 206-extend-study-access
2021-02-24 12:16:35 -05:00
Kelly McDonald
3dbe39c6fe
initial checkin of changes for branch
2021-02-24 12:05:06 -05:00
mike cullerton
f937ac3ce9
Getting some thoughts down for the extension property error. This might force us to use regexes for the error service.
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Committing so I can work on another branch.
2021-02-24 10:56:25 -05:00
mike cullerton
0a58dce394
Changes for ticket 215 - Change email header and footer to say CR Connect
2021-02-23 12:13:21 -05:00
Dan Funk
349c3d657a
Merge branch 'dev' into 201-changes-to-in-progress
2021-02-22 18:17:59 -05:00
Dan Funk
53fa49e668
Merge pull request #243 from sartography/183-remove-study-approval-code
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Remove Approvals per ticket 183
2021-02-22 18:12:02 -05:00
mike cullerton
4fc2929356
Put the preamble back in to the error message.
2021-02-19 15:57:01 -05:00
mike cullerton
3b06795c4c
File cleanup for readability. Removed some commented code.
2021-02-19 14:49:53 -05:00
Kelly McDonald
4fa0f9720a
Allow frontend to honor 'view as' and fix problem with tests
2021-02-18 11:25:17 -05:00
Kelly McDonald
8c309e9a41
Add user display name to the response for task events
2021-02-18 08:44:44 -05:00
Kelly McDonald
6fbaecf9b2
Change selection to include task events that are for someone else, but are on a study I own.
2021-02-18 08:09:13 -05:00
Dan Funk
f0a921d46d
Merge pull request #242 from sartography/allow-period-in-field-id-199
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Allow period in field id 199
2021-02-17 15:08:53 -05:00
Kelly McDonald
93f29e86d8
Merge branch 'dev' into STG-181_frontend-ux-model-changes
2021-02-17 07:49:05 -05:00
Dan
ff8a44a7b1
Make sure we always have a current user, even if the very first task is a script task.
2021-02-16 12:42:59 -05:00
Kelly McDonald
e54a6956df
Make a change in the case that we have no task_events at all.
2021-02-16 11:10:40 -05:00
Kelly McDonald
118cf62172
Merge remote-tracking branch 'origin/dev' into STG-181_frontend-ux-model-changes
2021-02-16 10:07:34 -05:00
Kelly McDonald
003bf2f9b9
Remove Approvals per ticket 183
2021-02-16 09:05:29 -05:00
Kelly McDonald
3b1dc70558
Add comment for later ticket
2021-02-16 08:44:41 -05:00
mike cullerton
ed6218028c
We now allow periods in field ids.
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Also, added task_id and task_name to the ApiError for missing default value on hidden and required fields
2021-02-15 16:27:56 -05:00
mike cullerton
39eb5c5c21
This is a decent beginning framework for customer error messages.
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It is not complete, but is in a state where we can start to interact with the front end.
Two tests are failing.
Committing so I can work on an error for Alex.
2021-02-12 14:18:42 -05:00
Dan
c44e784eb2
Fixing a bug with the user model.
2021-02-12 09:48:41 -05:00
Dan Funk
35773ebc29
Merge pull request #240 from sartography/weird-email-error
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The email script was failing validation because of missing parameters…
2021-02-12 09:31:52 -05:00
Nile Walker
7eeb491dfa
User str decode Removed
2021-02-12 09:30:18 -05:00
mike cullerton
d8bd203139
The email script was failing validation because of missing parameters in scripts.email.do_task_validate_only.
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I added a test in tests.test_email_script to make sure we get the default email_address.
I also found and fixed a bug in workflow_service.populate_form_with_random_data where we would overwrite default_values with random text because of a missing continue.
(We don't want to continue if we have repeating fields though.)
2021-02-11 15:36:12 -05:00
Dan Funk
fe4e737596
Merge pull request #238 from sartography/value-expression-failing-shield-test-194
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We now allow value_expression to evaluate to an empty string ("") so …
2021-02-11 11:25:09 -05:00
Dan Funk
df0cfc755b
Merge pull request #237 from sartography/get-study-from-model-error-191
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We now test whether we have a valid StudyModel when getting a study b…
2021-02-11 11:23:59 -05:00
Dan Funk
40639bbd03
Merge pull request #236 from sartography/trap-non-api-errors-187
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New error handler for non Api errors. Ticket 187
2021-02-11 11:22:48 -05:00
Dan Funk
df25b83958
Merge pull request #235 from sartography/index-error-for-enums-186
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Index error for enums 186
2021-02-11 11:21:50 -05:00
Dan Funk
10b9c7b892
Merge pull request #234 from sartography/hidden-and-required-fields-185
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Hidden and required fields 185
2021-02-11 11:20:35 -05:00
Dan
f7337f4e54
Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev
2021-02-11 11:17:56 -05:00
Dan
2ada9f6f42
Private Ldap settings
2021-02-11 11:17:21 -05:00
mike cullerton
39e874504f
We now allow value_expression to evaluate to an empty string ("") so that we *do not* set a default value for enums in some cases.
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This was causing an error because "" was not an option for the enum.
2021-02-10 14:35:58 -05:00
mike cullerton
8a2a8b1443
Still not in working order. Committing to work on another ticket.
2021-02-10 12:28:59 -05:00
Kelly McDonald
da0af14724
Changes to enable front-end changes
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Added a human readable name to created user
added last updated task time and name,
added is_review on the workflow which is triggered by a swimlane with a name present.
Notably - it does NOT update or change any of the performance concerns that we were having with this.
2021-02-10 11:58:19 -05:00
mike cullerton
777cfbdecd
We now test whether we have a valid StudyModel when getting a study by study model.
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We raise an ApiError if the model is None or empty.
2021-02-09 17:37:55 -05:00
mike cullerton
3e32cdedc4
New error handler for non Api errors. Ticket 187
2021-02-09 16:35:57 -05:00
mike cullerton
b42b843f7d
It was possible for an enum field lookup to return an empty list. This meant there were no options for the list.
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We now test for this and raise an error.
2021-02-08 15:10:53 -05:00
mike cullerton
e87e7b5b8b
Form fields that can be hidden and required must now have a default value or value_expression.
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Also, if a field is hidden but not required, it should not produce a value.
2021-02-08 10:18:41 -05:00
mike cullerton
fa34bee18a
First commit for cleaning up error messages for customers.
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This is *not* in a working state.
Committing this so I can work on another ticket.
2021-02-04 11:23:05 -05:00
Dan Funk
329146237e
Merge pull request #232 from sartography/boolean-default-values-175
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Boolean default values 175
2021-02-03 16:34:54 -05:00
Dan Funk
effd11f947
Merge pull request #231 from sartography/cancellations-137
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Cancellations 137
2021-02-03 16:31:18 -05:00
Dan Funk
2d01b92a50
Merge pull request #230 from sartography/pretty-emails-160
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Pretty emails 160
2021-02-03 16:20:38 -05:00
Dan Funk
1eba20f420
Merge pull request #229 from sartography/workflow-spec-order-74
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Workflow spec order 74
2021-02-03 16:18:34 -05:00
mike cullerton
b090e31e00
This fixes 2 issues with setting boolean defaults
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- If the default was False, we failed an early test and returned None. We now only return None if default is None
- We have a better test for deciding if the default value we return should be True or False. We used to return True if the value was the string 'false'.
2021-02-03 09:50:16 -05:00
mike cullerton
c5cf3ea7ff
Changed call to WorkflowProcessor.reset to reflect change from class method to instance method.
2021-01-29 14:34:09 -05:00
mike cullerton
7e76639cf3
When a study is put on hold, we now reset workflows and call any pending cancel_notify events.
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In api.study.update_study we test the study status and call the new WorkflowService method process_workflows_for_cancels.
In services.workflow_service we added the new method process_workflows_for_cancels. It loops through workflows for a study, and resets them if they are in progress.
In services.workflow_processor, we changed the reset method to be an instance method so we can call self.cancel_notify.
In tests.test_lookup_service we changed the call to WorkflowProcessor.reset to reflect the change from class method to instance method
2021-01-29 14:05:07 -05:00
mike cullerton
958d5a6281
Possible solution for W3C issues raised by Sonarcloud
2021-01-28 09:45:53 -05:00
mike cullerton
d7a3afe8f4
changed the template to use the responsive html email template at https://github.com/leemunroe/responsive-html-email-template
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added method get_cr_connect_wrapper to render our new html email template. This takes the email text generated from the task element documentation as the email_body.
2021-01-27 17:12:03 -05:00
Dan Funk
cccb722e07
Merge pull request #226 from sartography/enum_default_value_expression_162
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Enum default value expression 162
2021-01-27 10:43:46 -05:00
mike cullerton
81e55b6055
Cleaning up my smell. A task should only have default_value *or* value_expresion, not both.
2021-01-27 10:21:13 -05:00
mike cullerton
c99a388405
We now set the display_order automatically. Users can modify order using the arrows.
2021-01-27 09:50:29 -05:00
Dan Funk
98f946c119
Merge pull request #227 from sartography/missing_form_key_163
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Missing form key 163
2021-01-27 09:42:46 -05:00
mike cullerton
ecc553c4ea
Jinja templates and svg file for pretty emails
2021-01-26 09:20:16 -05:00
mike cullerton
909af9b8d6
Change HTML emails so they look like the CR-Connect website. Add logo, color, style, etc.
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Cleaned up email script a little.
Also, email script no longer uses services.mails. It uses email_service directly now.
2021-01-26 09:19:28 -05:00
mike cullerton
b71fd93dd4
We now make sure that forms have a form key. Ticket 163
2021-01-22 12:14:17 -05:00
mike cullerton
00d9276483
In spiff_task_to_api_task, when looping through fields, if the field doesn't have a value, we now try to set it with the default value
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In test_spec, we now check for FIELD_PROP_VALUE_EXPRESSION when setting default values
2021-01-22 10:00:28 -05:00
Dan
5921ce9f10
Merge branch 'dev' into 152-workflow-spec-pull
2021-01-21 12:30:43 -05:00
Dan Funk
5b13195182
Merge pull request #224 from sartography/restart-with-no-data-99
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Restart with no data 99
2021-01-20 17:22:18 -05:00
Dan
41dac33039
Removed two tests around soft_reset that are no longer required.
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Reset should construct the workflow_processor, thus completing the reset process.
Removed the spec argument from init, as it is never used anywhere.
2021-01-20 13:24:53 -05:00
mike cullerton
039a1dcd79
WorkflowProcessor code for new restart_workflow api endpoint. WorkflowProcessor.reset will clear workflow_model.bpmn_workflow_json, and if clear_data is True will clear form data.
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WorkflowProcessor.__init__ is mostly unchanged.
2021-01-19 15:14:36 -05:00
mike cullerton
9c71a503ca
Python code for new restart_workflow api endpoint. Cleaned up code and docstring in get_workflow to match.
2021-01-19 15:09:20 -05:00
mike cullerton
e1532a90c9
New api endpoint for restarting a workflow. Unsure if I needed the responses section. **Dan, can you check this?**
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Also, removed clear_data and reload_spec as parameters for standard get workflow endpoint.
2021-01-19 15:00:39 -05:00
mike cullerton
6a9e6d3570
Restart workflow without form data. Committing so Dan can check it out
2021-01-14 15:32:14 -05:00
Kelly McDonald
cf7990ce85
Refactor for better readability due to code smell test
2021-01-12 08:54:32 -05:00
Kelly McDonald
e14b896225
Add documentation
2021-01-11 09:31:08 -05:00
Kelly McDonald
f282a9ef73
Make sure that top_level_workflow is transferred over, also include reference files in the list of files to sync
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We may want to revisit this because I used a 'Magic' workflow_ref_id of 'REFERENCE_FILES' as a special case so I could re-use most of what I already had. This works well, but we may want to structure it different.
2021-01-11 09:21:44 -05:00
Dan
336c093bf8
Catch errors when building enumeration lists.
2021-01-08 15:15:24 -05:00
Dan
26655b26d3
merging in dev, and fixing a failing test from dev.
2021-01-08 14:42:13 -05:00
Dan Funk
9118517995
Merge pull request #220 from sartography/prevent-duplicate-template-upload-111
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Users cannot upload a workflow_spec_file that already exists. We rais…
2021-01-08 13:55:19 -05:00
Dan Funk
be288ae048
Merge pull request #219 from sartography/fix-api-call-missing-fieldname-143
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Fixed ApiError call. Now includes task_id and task_name.
2021-01-08 13:46:26 -05:00
Dan Funk
81fe3e7957
Merge pull request #218 from sartography/is-file-uploaded-143
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Ticket 143. Test whether file is uploaded.
2021-01-08 13:45:24 -05:00
Dan
72a73c1fc4
Allow for synch to work even if the local set of workflow specifications are completely empty.
2021-01-08 13:23:01 -05:00
mike cullerton
d274813ae5
We now check form field IDs so they play well with Python and Javascript.
2021-01-07 11:10:31 -05:00
mike cullerton
c9a4a9685f
Users cannot upload a workflow_spec_file that already exists. We raise an error that is displayed on the fron end.
2021-01-04 15:47:45 -05:00
mike cullerton
0ae4448fbe
Fixed ApiError call. Now includes task_id and task_name.
2021-01-04 13:48:34 -05:00
Dan
b0dc834682
Don't error out on autocomplete_num
2021-01-04 13:41:57 -05:00
mike cullerton
0c47d09972
Ticket 143. Test whether file is uploaded.
2021-01-04 10:53:21 -05:00
Dan Funk
386feddeed
Merge pull request #214 from sartography/validate-hide-expression-103
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Modified study_info do_task_validate_only so that we take the default…
2020-12-31 10:53:27 -05:00
Dan Funk
cf106fb9cd
Merge pull request #216 from sartography/place-study-on-hold-20
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Studies can now be put on hold in the dashboard. We were overriding t…
2020-12-31 10:53:03 -05:00
mike cullerton
ede5df4df5
Studies can now be put on hold in the dashboard. We were overriding the status in StudyModel.update_from_protocol_builder.
2020-12-30 17:49:59 -05:00
Dan
efdbbcbc72
StudyInfo sometimes returns arrays of items, each item in the array should be coverted to a Box dictionary if possible.
2020-12-30 14:51:51 -05:00
mike cullerton
f29429f0d0
Modified study_info do_task_validate_only so that we take the default path in ind_update workflow.
2020-12-30 10:04:10 -05:00
Dan
e5a38874f6
A hard or soft reset should also cause a 'cancel_notify' which will kick off any CANCEL events. If this happens during
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a hard or soft reset, and an error is thrown trying to fulfil a cancel event, the reset should still fire.
Sending emails still had a number of issues correctly parsing it's arguments. This is corrected.
2020-12-29 18:05:13 -05:00
Dan
c288a8a2bc
Merge branch 'dev' into check-field-type#143
2020-12-29 11:11:43 -05:00
mike cullerton
7938ac8eed
We now assure each form field has a field type. Modified populate_form_with_random_data, added check at beginning of form field loop.
2020-12-28 18:02:16 -05:00
Dan
6cfce839c1
Validation now assures that we won't encounter errors when generating navigation lists.
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Fixing workflow sync paths that were incorrect.
Repairing a suddenly failing test in files, that just don't make no sense.
Bumping spiffworkflow that contains a fix for issue #155
2020-12-28 17:33:38 -05:00
Dan
1f9bf72c59
Merge branch 'dev' into bug/navigation
2020-12-14 11:46:44 -05:00
Dan Funk
4268d0f482
Merge pull request #208 from sartography/152-workflow-spec-pull
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152 workflow spec pull
2020-12-14 11:35:06 -05:00
Dan
bcb78de225
Merge branch 'dev' into bug/navigation
2020-12-14 11:33:51 -05:00
Dan Funk
e54404e424
Merge pull request #205 from sartography/test-email-script
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Test email script
2020-12-14 11:28:14 -05:00
Dan
6bf24cc438
fixing some failing tests related to changes in the underlying spiffworkflow library.
2020-12-14 11:27:38 -05:00
Dan
b62a9c7074
Merge remote-tracking branch 'origin/dev' into bug/navigation
2020-12-14 10:40:21 -05:00
Dan
fd4b881416
upgrading the pip libraries.
2020-12-14 10:30:10 -05:00
Kelly McDonald
ee3ee9fd4a
Added tests to cover most of the use cases and code, and a bunch of stuff to make the mocks happy
2020-12-14 10:27:40 -05:00
Dan
02ea414b94
Additional fixes to Navigation to allow a nested navigation structure.
2020-12-14 10:07:19 -05:00
mike cullerton
7defc2b02f
Tests for uid in logs. Currently we test for uid in a response. This covers ApiError.
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Currently, we don't have a test for Sentry. Unsure how to do this.
Also added a script, service and test workflow to help. (Also to learn about adding a script and service.)
2020-12-11 17:47:53 -05:00
mike cullerton
856fe445b0
Added user.uid to ApiError and Sentry logging
2020-12-11 16:26:03 -05:00
Kelly McDonald
adc4dc4453
redid the api a bit so that nothing was using open security - added a new endpoint for getting a workflow spec that uses the alternate API_TOKEN security and leave the original endpoint as it was.
2020-12-11 12:03:41 -05:00
Kelly McDonald
55e6f5b753
refactored calls into a service - forgot to add actual service
2020-12-11 11:42:00 -05:00
Kelly McDonald
3a1160efac
refactored calls into a service
2020-12-11 11:41:32 -05:00
Kelly McDonald
9eea26e019
add workflow_sync test
2020-12-11 08:34:59 -05:00
Kelly McDonald
993c7bc76e
fixed error on api.yml from search / replace
2020-12-11 08:29:37 -05:00
Kelly McDonald
3f56dfe484
Move all workflow sync stuff into new file
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Make changes to api naming scheme
add some error checking around endpoints for missing/invalid endpoints
2020-12-10 10:46:23 -05:00
Kelly McDonald
a8203ed01d
save changes before refactor
2020-12-10 10:06:21 -05:00
Kelly McDonald
e377a05dea
Add some punctuation
2020-12-09 13:50:52 -05:00
Kelly McDonald
c57b17df1e
Add a robust way of adding an API key, update examples and documentation for swagger API and add the ability to completely sync the local system from the remote system.
2020-12-09 12:13:17 -05:00
mike cullerton
32c5060a31
No longer use eval on the email address. It is already parsed.
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Tests for single and multiple emails, and email error checking.
Still need to figure out how to implement multiple emails.
2020-12-09 12:11:46 -05:00
Kelly McDonald
0e1aa59fa1
Make a change to make sure that if there is a new file locally that is not present remotely when we pull from the remote, the new local file gets deleted.
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Also: add several things to the requirements.txt that should have been there in the first place.
2020-12-08 13:42:01 -05:00
mike cullerton
730d0ca18f
Email script now uses an email address instead of a UVA LDAP user_id.
2020-12-07 16:23:41 -05:00
Kelly McDonald
44c72115ae
Make sure we get the file we intended
2020-12-07 08:50:20 -05:00
Kelly McDonald
f26a8615a4
Get more file details so we can fill out everything locally and also add a method to download the file by md5_hash
2020-12-07 08:49:38 -05:00
Dan
93b12a8e82
updates using new navigation from spiff workflow's navigation branch, all tests passing.
2020-12-04 17:56:12 -05:00
Kelly McDonald
cad613cf63
Fix problem when method is run for a workflow that is non-existant locally
2020-12-04 12:00:02 -05:00
Kelly McDonald
d41d018fe3
For a given workflow - find the files that are different from a remote endpoint for the same workflow
2020-12-04 11:49:07 -05:00
Kelly McDonald
3e8d4ca7c9
Add some inline documentation to make the process more clear
2020-12-04 10:23:03 -05:00
Kelly McDonald
10dce542ec
documentation change
2020-12-03 15:27:45 -05:00
Kelly McDonald
0f59d3de09
add endpoint that gets a record for all changed /new workflow_specs at a remote endpoint
2020-12-03 14:45:57 -05:00
Kelly McDonald
bcb45a59c8
allow cors
2020-12-03 08:46:34 -05:00
Kelly McDonald
0e8913434a
refactor a bit
2020-12-03 08:44:15 -05:00
Kelly McDonald
92aa1b971d
commit before removing big long SQL
2020-12-02 16:04:00 -05:00
Dan
aca1fb366b
Fixing a failing test and updating the personnel.
2020-12-01 15:47:27 -05:00
Dan Funk
e15130e09c
Merge pull request #203 from sartography/151-data-store-exclusive-branch-expression
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Added the ability to use the custom functions within a decision/flow …
2020-12-01 14:44:27 -05:00
Dan Funk
801c5df75e
Merge pull request #201 from sartography/verify-end-event-#105
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Verify end event #105
2020-12-01 14:24:12 -05:00
Dan
e0c28cbc7d
Make it easer to start things up.
2020-12-01 11:17:07 -05:00
Kelly McDonald
94662c560e
Added the ability to use the custom functions within a decision/flow coming off of an exclusive join
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Altered previous test to test this feature
2020-12-01 09:13:12 -05:00
mike cullerton
73e01b347b
Ticket #105 . Verify End Event Documentation. Added explicit call to _process_documentation at end of crc.services.workflow_service.test_spec for the end event
2020-11-24 16:51:18 -05:00
Dan
071c98d72e
Some minor config tweaks to try and deal with some database timeout issues.
2020-11-19 11:25:58 -05:00
Dan Funk
b8a91a513b
Merge pull request #196 from sartography/128-data-store
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128 data store
2020-11-18 18:55:33 -05:00
Dan
b83ab1bcd1
Move data store base into its own file.
2020-11-18 15:34:50 -05:00
mike cullerton
d198f124d7
Committing a merge from dev
2020-11-18 15:33:44 -05:00
Dan
66693d9f3a
Removing datastore script, as it isn't used in the api at all.
2020-11-18 15:06:28 -05:00
Dan
c62b73a539
drop some of the test-only api endpints and rework the tests so they aren't needed
2020-11-18 15:04:36 -05:00
mike cullerton
16313609ec
removed call to signal (changed to cancel_notify)
2020-11-18 13:55:30 -05:00
Kelly McDonald
72ade3c367
Add crosstalk test
2020-11-17 10:29:49 -05:00
Kelly McDonald
e9979efb0d
Add some tests
2020-11-17 09:33:29 -05:00
mike cullerton
a2dc3c4812
Use Cancel Event
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New title 'New Title'
2020-11-16 09:59:22 -05:00
Kelly McDonald
70425eee0d
Add last_updated field - change the api signature to be closer to what we need going forward, but retain the old methods for testing the script get/set through the API
2020-11-13 12:03:29 -05:00
Kelly McDonald
7c2c725840
save before changing how API works
2020-11-13 09:58:21 -05:00
Kelly McDonald
acaf633b45
Added ID as pk
2020-11-11 11:36:25 -05:00
Kelly McDonald
9a4d167dcd
Add in api changes
2020-11-11 09:44:58 -05:00
Kelly McDonald
cef221be32
Refactor to reuse code
2020-11-10 11:32:59 -05:00
Kelly McDonald
3ba11f5e6b
add user_data_get/set and alter test so that it ensures that we don't grab study_data stuff from the user_data calls
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change the test to mock up the user.
2020-11-10 10:32:37 -05:00
Kelly McDonald
245124779e
Add mostly-working elements of the data-store, compare with dev to see why db is not working after running tests
2020-11-10 08:21:46 -05:00
Kelly McDonald
e598994d34
Change the study_sponsors script so that we can actually call it :
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var = study_info('sponsors')
to keep it more in line with other scripts that we have
2020-11-05 10:31:47 -05:00
Kelly McDonald
1815a4b657
Merge branch '117-save-restore' into dev
2020-11-05 08:24:18 -05:00
mike cullerton
a78af4eab8
Run cancel task during interrupt. Currently this uses Signal event. We may change this to the Cancel event.
2020-11-04 14:37:53 -05:00
Kelly McDonald
2931f45187
Add 'sponsors' to study_info call
2020-11-04 14:34:10 -05:00
Kelly McDonald
849a4e9f94
Made changes to how soft_reset works so it is backward compatible - essentially, we use the file if we are doing a soft-reset or a new workflow. NB, this may actually still have problems if we have a workflow with P/SMI and we do a soft-reset on it even if there are no structural changes.
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Also, change how default_value is interpreted, looking at the object attribute rather than the properties list.
2020-10-09 11:00:33 -04:00
Kelly McDonald
8b23cdc05c
commit changes before switching branches
2020-10-09 08:46:14 -04:00
Dan Funk
b2aede2b8d
Glob on windows seems to return directories where in linux it does not, so now assuring we don't try to add files from the sub-directory.
2020-10-05 17:35:35 -04:00
Dan Funk
014a4d9757
Fixing a failing test and updating the personnel.
2020-09-02 08:24:48 -04:00
Dan Funk
b544334f45
1. Updating Personnel BPMN diagram to debug some issues.
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2. Disabling the token timeout for now, to see if this corrects the issues Alex is having with lost work.
3. Raising more thoughtful error messages for unknown lookup options.
4. Providing better validation of default values and injecting the correct value for defaults related to enum lists of all types.
5. Bumping Spiffworkflow library which contains some better error messages and checks.
2020-09-01 15:58:50 -04:00
Dan Funk
1052dff549
Merge remote-tracking branch 'origin/dev' into feature/python_eval
2020-08-27 14:33:16 -04:00
Dan Funk
5dacc46600
Adding some additional bpmns from Staging server to include in tests.
2020-08-27 14:00:45 -04:00
Dan Funk
53d09303d8
Validating that field properties are valid - they must exist as constants on the Task model.
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Making all the lookup field names consistent.
Fixing the lookup service which was failing at times trying to find the correct field to use for building the lookup table.
Updating validation to check for additional fields and properties.
When connexion level errors occur, wrapping it in an API Error to be consistent.
2020-08-27 14:00:14 -04:00
Dan Funk
1a713bd140
updating bpmn files from the staging server.
2020-08-27 13:55:27 -04:00
Dan Funk
d31fd47837
Merge branch 'dev' into feature/python_eval
2020-08-25 11:08:42 -04:00
Dan Funk
5be35e8bab
Adding a study sponsors script to return details about study sponsors
2020-08-25 10:30:46 -04:00
Aaron Louie
182e375fdc
Adds a test for string manipulation
2020-08-21 13:46:10 -04:00
Aaron Louie
4dc98a6b6b
Injects current user into task data.
2020-08-21 13:34:37 -04:00
Dan Funk
66e49a347a
Minor tweaks to the eval endpoint, which should take both the expression and the data as one data structure.
2020-08-20 16:13:48 -04:00
Dan Funk
7f60a19d55
Merge pull request #189 from sartography/feature/documents_publishing
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Update github routines to use branches
2020-08-17 15:52:47 -04:00
Dan Funk
8f5488d910
Don't raise an error when validating workflows that use the ldap script.
2020-08-17 15:45:37 -04:00
Dan Funk
35b1b20960
Merge remote-tracking branch 'origin/dev' into feature/documents_publishing
2020-08-17 15:19:24 -04:00
Dan Funk
dfaffc22b5
Merge remote-tracking branch 'origin/dev' into fix/returning_failed_name_message
2020-08-17 15:18:17 -04:00
Dan Funk
d4c5e297cc
Merge remote-tracking branch 'origin/dev' into fix/delete_workflow_endpoint
2020-08-17 15:09:11 -04:00
Dan Funk
32d47c1417
Merge remote-tracking branch 'origin/dev' into fix/delete_workflow_endpoint
2020-08-17 15:08:44 -04:00
Dan Funk
c09441d019
Merge branch 'dev' into fix/delete_workflow_endpoint
2020-08-17 15:07:58 -04:00
Dan Funk
85ad477b2b
Some minor cleanup on the study status and automatic events. I wanted to avoid having one database model automatically generating other database models as a side effect. The study service now has full responsiblity to recording study events.
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To help in running tests, adding __init__.py methods to all the test directories.
2020-08-17 14:56:00 -04:00
Carlos Lopez
2bd906e96d
Update github routines to use branches
2020-08-14 11:04:22 -06:00
Carlos Lopez
304ca77e3e
Fixing exception within NameError handler
2020-08-14 09:01:15 -06:00
Carlos Lopez
369fe4bb35
Automatic events refactoring
2020-08-14 08:36:46 -06:00
Carlos Lopez
aa010272cc
Automatic event creation in study creation
2020-08-14 08:36:10 -06:00
Dan Funk
c57ac6d302
Merge pull request #185 from sartography/feature/107_current_user_info
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calling ldap with no argument will return information about the curre…
2020-08-14 09:18:10 -04:00
Dan Funk
08c24b7441
Merge pull request #184 from sartography/PMI_fix
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Pmi fix
2020-08-14 09:17:58 -04:00
Dan Funk
c12e2b97f3
calling ldap with no argument will return information about the current user.
2020-08-13 21:09:52 -04:00
Dan Funk
1a963cf940
Merge branch 'dev' into PMI_fix
2020-08-13 20:49:45 -04:00
Dan Funk
9a5c1d7cfb
I may have finally wrapped my head around full text search in python. Now properly using an index based on simple rather than english dictionary which has far fewer stop words and stemming processes and plays much better to the type ahead search we are trying to provide.
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Stop words are no longer excluded, so "other" is a valid search and gets a result.
2020-08-13 18:13:41 -04:00
Dan Funk
e8067fe34e
adding additional data to the study details returned during validation/shield testing.
2020-08-12 17:04:59 -04:00