0cc59d0974
Adds study inactive flag. Sets study to inactive if not found in Protocol Builder.
2020-02-27 11:17:58 -05:00
f3068e68db
Adds user to example data. Requires login before adding/updating a study.
2020-02-27 10:30:16 -05:00
27d7afb656
Adds Protocol Builder models and schemas. Reorganizes and cleans up some files.
2020-02-27 09:54:46 -05:00
1e8a095760
Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-25 12:01:25 -05:00
002207cbca
Adds redirect URL to login handler
2020-02-24 16:59:16 -05:00
1ac9180304
Updates tests to match changing sso_backdoor to query string params
2020-02-21 12:03:14 -05:00
e4efc5e4e2
Fixes broken test
2020-02-21 12:02:35 -05:00
a6e0809183
Adds SSO attributes. Prevents uid duplication errors.
2020-02-20 17:23:10 -05:00
0cda7c66e5
Merge remote-tracking branch 'origin/master'
2020-02-20 15:43:34 -05:00
581434b453
Adds SSO header attributes
2020-02-20 15:43:29 -05:00
a94596112d
Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-20 14:35:21 -05:00
2cc6010c8d
Protocol builder connections
2020-02-20 13:30:04 -05:00
1a9b5b50e5
Merge branch 'master' of github.com:sartography/cr-connect-workflow
2020-02-18 16:39:11 -05:00
a642593e3d
Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 16:38:56 -05:00
16db1e3504
Adds default_value to Task schema
2020-02-18 10:14:03 -05:00
5f461d9e87
Fixes FactService
2020-02-11 22:13:46 -05:00
0a3a932c50
Comments out study workflow for now. Fixes failing unit tests.
2020-02-11 13:40:14 -05:00
709bae76b2
Removing a rogue comma that was causing havoc. Also, don't fail if a mock already exists in the test database.
2020-02-11 11:11:21 -05:00
879a248002
Adding a test to assure the file creation occurs as expected via the API.
2020-02-10 20:54:22 -05:00
1d24ebe382
Provide a script for generating word documents from template files. Refractored file managment into a service to make it easier to programatically add files. Modified the workflow_processor to inject the study_id and workflow_id into the running workflow so that this meta-information is avialable at the task level.
2020-02-10 16:19:23 -05:00
f142d02a30
Adds workflow_spec_id back in to WorkflowApi
2020-02-07 12:36:08 -05:00
9bd93748be
Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
2020-02-07 11:34:44 -05:00
ec4df2b3fa
Cleaning up the tests and making it easier to test workflows without adding them to the example data structure.
2020-02-04 16:49:28 -05:00
9e6fbfee79
Followup on Postgres - had some failing tests that needed cleaning up now that we are using a real database.
2020-02-04 15:44:06 -05:00
0368657549
Adds ability to get FileModel records by study and task
2020-02-03 21:56:18 -05:00
8fbbed4feb
You must all "do engine steps" when completing a task so that it will kick off any automatic tasks/decisions/etc... this will update remaining tasks. Added some tests for parallel, since I wrote them trying to debug this.
2020-02-03 15:15:36 -05:00
8cc04aaad2
Adds task data to Task schema
2020-02-03 10:49:48 -05:00
ba9330bc21
Fixes broken tests
2020-01-31 11:33:43 -05:00
acca1523b7
adding an api call for getting a single workflow spec.
2020-01-28 10:14:06 -05:00
a3b6e4fc7f
Fixes import paths
2020-01-24 11:52:52 -05:00
0a44ef04d7
Slight refactoring - makes BaseTest inherit from TestCase. Checks that data loader works properly
2020-01-24 09:35:14 -05:00
50dfa561a9
Fixes import paths, which were screwing up stuff.
2020-01-24 09:29:50 -05:00
6faabea8a4
Deletes related files and workflows when a workflow spec is deleted.
2020-01-24 09:26:17 -05:00
5c5f38e4ee
Adds test for deleting a workflow spec
2020-01-23 16:14:05 -05:00
45f2e52c86
Merge branch 'feature/update-task-data' of github.com:sartography/cr-connect-workflow into feature/update-task-data
2020-01-23 15:35:51 -05:00
95b75f864d
You can now add multiple files to a workflow spec, and if properly linked, you can associate a DMN file with a BPMN to process decision tables.
2020-01-23 15:32:53 -05:00
6158243053
Fixes modify workflow method
2020-01-21 15:24:17 -05:00
790b0dfc3a
Adds endpoint for modifying existing workflow spec
2020-01-14 14:10:53 -05:00
50ee50e3c2
Fixes broken unit test
2020-01-14 11:47:36 -05:00
fe15799ee1
Adds type hinting to db and session to fix Pycharm autocomplete. Replaces db.session with session.
2020-01-14 11:45:12 -05:00
6361e94af5
Allow submitting data and progressing to the next task in a workflow.
2020-01-14 11:02:44 -05:00
75881bf1d3
Adds endpoint for adding a workflow specification
2020-01-13 21:43:09 -05:00
a3d7ba8114
WIP
2020-01-07 13:23:46 -05:00
872f3fca1b
Returns workflow spec id with Workflow schema
2020-01-06 09:18:13 -05:00
e75da611ca
Adds endpoints for creating and updating a Study.
2020-01-03 11:44:24 -05:00
c4cbaeb64e
Refactor models into seperate directories
2019-12-31 16:32:47 -05:00
9a195bedad
Fixing some caching issues and places where the updates were not being processed completed. And updates to the docker file.
2019-12-31 11:31:30 -05:00
0685b282e8
Don't put foreign key constraints on primary keys.
2019-12-30 16:00:33 -05:00
fb465531ca
Add the ability to delete a workflow.
2019-12-30 13:15:39 -05:00
b54bd49cf4
Allow for clearing out the database.
2019-12-30 13:03:57 -05:00
91a91e9677
Read workflow configuration from the database, and not from a file.
...
And dropping the API call in the Fact Service so we aren't hitting external apis for the time being.
2019-12-30 11:07:26 -05:00
0b71833946
Adding file management. Files are stored in the database along with basic meta data.
2019-12-27 13:50:03 -05:00
bb6ab4b8e8
Tasks can have forms and they are returned correctly.
2019-12-19 11:58:51 -05:00
0dc422c7f6
we need a commit at the end, but I don't really believe that.
2019-12-18 15:32:06 -05:00
53a8811769
Add workflow to study
2019-12-18 15:22:46 -05:00
fbbd6c6659
Adding a workflow from a spec
2019-12-18 14:42:40 -05:00
9861f6baf3
Lots and lots of random stuff as I organize code and get things to make sense.
2019-12-18 14:02:17 -05:00
e8ac73888b
Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 11:45:44 -05:00
630ee90b6b
Adding a camunda parser, so we can use this free and beautiful editor to build diagrams.
...
Adding a command line implemenation so I can get a grip on what is happening in real time more quickly.
Started working on some custom tasks, but need to put a little more effort into this area.
Minor updates to the readme
Adding a joke BPMN that I can test with.
2019-11-25 16:04:09 -05:00
3bdfba6db0
Still learning - writing tests around the demo. Getting the file structure cleaned up.
2019-11-22 10:50:30 -05:00
9280aab0b6
name tests so they get picked up and run.
2019-11-21 12:01:51 -05:00
b279246e80
Setting up tests to work correctly when verifying endpoints.
2019-11-21 11:36:32 -05:00
92ce0d048a
Creating an "app" base directory - this allows us to organize the source files and keep them separate from tests, configuration, and pipenv stuffs. Adding basic config and test directories and getting that set up and ready to roll.
2019-11-21 09:22:42 -05:00
Aaron Louie
Dan Funk
Aaron Louie